Paenibacillus lemnae sp. nov., an endophytic bacterium of duckweed (Lemna aequinoctialis).

abstract：:A Gram-negative, non-motile, non-gliding, strictly aerobic, pale yellow colony-forming, rod-shaped bacterial strain, designated HM0024(T), was isolated from coastal seawater of the Yellow Sea and subjected to a polyphasic taxonomy study. Based on 16S rRNA gene sequence similarities, strain HM0024(T) was most closely r...

journal_title：International journal of systematic and evolutionary microbiology

authors： Joung Y,Song J,Lee K,Oh HM,Joh K,Cho JC

更新日期：2010-09-01 00:00:00

abstract：:Two Gram-positive, rod-shaped, spore-forming and moderately halophilic bacteria (strains 28-1T, 28-4), isolated from a soil sample from a neutral salt lake in Xin-Jiang, China, were characterized polyphasically. On the basis of fasta (ungapped) analyses of 16S rRNA gene sequences, strains 28-1T and 28-4 were shown to ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ren PG,Zhou PJ

更新日期：2005-01-01 00:00:00

abstract：:A rod-shaped, Gram-staining-negative, strictly aerobic, non-motile bacterium with no flexirubin-type pigment, designated as W201ET, was isolated from an intertidal sandy beach in Antarctica. The organism formed faintly yellow, round colonies on marine agar 2216E. The strain required sea salts for growth and grew optim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ren Q,Yu M,Li Y,Zhang Y,Shi X,Wu Y,Su Y,Wang Y,Wang X,Zhang XH

更新日期：2018-03-01 00:00:00

abstract：:A Gram-negative, rod-shaped, motile and aerobic bacterium, designated strain HJ51(T), was isolated from a seawater sample from the East Sea, near South Korea. The isolate grew slowly at 4 °C, was able to grow at 40 °C, required NaCl and grew optimally at pH 6.5-7.0. The G+C content of the genomic DNA was 41.8 mol%. Th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oh YS,Park AR,Lee JK,Lim CS,Yoo JS,Roh DH

更新日期：2011-02-01 00:00:00

abstract：:A polyphasic approach was used to clarify the taxonomy of the water-bloom-forming oscillatorioid cyanobacteria. Seventy-five strains of oscillatorioid cyanobacteria were characterized by 16S rDNA sequence analysis, DNA base composition, DNA-DNA hybridization, fatty acid composition, phycobilin pigment composition, com...

journal_title：International journal of systematic and evolutionary microbiology

authors： Suda S,Watanabe MM,Otsuka S,Mahakahant A,Yongmanitchai W,Nopartnaraporn N,Liu Y,Day JG

更新日期：2002-09-01 00:00:00

abstract：:A bacterial strain, designated an-8(T), was isolated from a freshwater shrimp culture pond in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain an-8(T) were Gram-reaction-negative, aerobic, rod-shaped and non-motile, formed yellow-pigmented colonies and grew at 15-30 °C (optimum 25 °C), p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Chiu TF,Young CC,Arun AB,Chen WM

更新日期：2011-06-01 00:00:00

abstract：:The phylogeny of the class Actinobacteria remains controversial, essentially because it is very sensitive to the choice of dataset and phylogenetic methods. We used a test proposed recently, based on complete genome data, which chooses among candidate species phylogenies based on the number of lateral gene transfers (...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sen A,Daubin V,Abrouk D,Gifford I,Berry AM,Normand P

更新日期：2014-11-01 00:00:00

abstract：:Strains MWH-EgelM1-30-B4T and MWH-Feld-100T were isolated from the water columns of two freshwater systems. Both strains represent delicate bacteria not easy to work with in laboratory experiments. Phylogenetic analyses of the 16S rRNA genes suggested that both strains were affiliated with the genus Polynucleobacter. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Koll U,Schmidt J,Huymann LR,Karbon G,Lang E

更新日期：2018-08-01 00:00:00

abstract：:Thirteen strains of a novel spore-forming, Gram-positive, mesophilic heterotrophic bacterium were isolated from spacecraft surfaces (Mars Odyssey Orbiter) and assembly-facility surfaces at the Jet Propulsion Laboratory in California and the Kennedy Space Center in Florida. Phylogenetic analysis of 16S rRNA gene sequen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Satomi M,La Duc MT,Venkateswaran K

更新日期：2006-08-01 00:00:00

abstract：:A novel bacterial strain, designed Q4-3T, was isolated from a soil sample obtained from Qilian grassland, Qinghai, China. Phylogenetic, phenotypic, chemotaxonomic and molecular analyses were performed on the new isolate. Cells were Gram-stain-positive, facultatively anaerobic, spore-forming, motile rods with peritrich...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhuang J,Xin D,Zhang YQ,Guo J,Zhang J

更新日期：2017-11-01 00:00:00

abstract：:A thallium-tolerant, aerobic bacterium, designated strain SK200a-9(T), isolated from a garden soil sample was characterized using a polyphasic approach. Comparative analysis of 16S rRNA gene sequences revealed that strain SK200a-9(T) was affiliated with an uncultivated lineage within the Alphaproteobacteria and the ne...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bao Z,Sato Y,Fujimura R,Ohta H

更新日期：2014-03-01 00:00:00

abstract：:A Gram-negative, non-motile bacterium, designated MJ17(T), was isolated from sludge at the Daejeon sewage disposal plant in South Korea. Comparative 16S rRNA gene sequence analysis showed that strain MJ17(T) belonged to the genus Paracoccus in the family Rhodobacteraceae of the class Alphaproteobacteria. 16S rRNA gene...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee M,Woo SG,Park G,Kim MK

更新日期：2011-08-01 00:00:00

abstract：:Strain GAM6-1T is a novel, strictly anaerobic, non-spore-forming, Gram-stain-positive bacterium that was isolated from the faeces of a healthy individual. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain GAM6-1T was most closely related to Blautia producta ATCC 27340T (95.7 % sequence simil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park SK,Kim MS,Roh SW,Bae JW

更新日期：2012-04-01 00:00:00

abstract：:Five Mycoplasma strains have been isolated from the oropharynx of southern sea otters (Enhydra lutris nereis) from the Central California Coast, USA. These strains were phenotypically and genetically characterized and compared to other established Mycoplasma species. All five strains hydrolysed arginine but not urea, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Volokhov DV,Batac F,Gao Y,Miller M,Chizhikov VE

更新日期：2019-02-01 00:00:00

abstract：:Genome comparisons based on average nucleotide identity (ANI) values of four strains currently classified as Polynucleobacter necessarius subsp. asymbioticus resulted in ANI values of 75.7-78.4 %, suggesting that each of those strains represents a separate species. The species P. necessarius was proposed by Heckmann a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Schmidt J,Pitt A,Taipale SJ,Lang E

更新日期：2016-08-01 00:00:00

abstract：:A Gram-stain negative, pink-pigmented, strictly aerobic, non-motile and coccoid-shaped bacterial strain, designated TG-679T, was isolated from a deep-sea water sample collected from the South China Sea. Cells of strain TG-679T were catalase- and oxidase-positive, lacked bacteriochlorophyll a and carotenoid. Strain TG-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ren Y,Chen C,Ye Y,Wang R,Han S,Zhao Z,Zhang R,Zhang G,Wu M,Xu J

更新日期：2019-02-01 00:00:00

abstract：:Nineteen strains of Gram-positive, non-motile, non-spore-forming, catalase-positive, rod-shaped bacteria isolated from pigs were characterized by using biochemical, molecular chemical and molecular genetic methods. Two distinct groups of organisms were discerned, based on their colonial morphology, CAMP (Christie-Atki...

journal_title：International journal of systematic and evolutionary microbiology

authors： Vela AI,Mateos A,Collins MD,Briones V,Hutson RA,Domínguez L,Fernández-Garayzábal JF

更新日期：2003-11-01 00:00:00

abstract：:Two novel siderophore-producing strains designated CC-CFT023(T) and CC-CFT034(T), isolated from a rusty iron plate, are characterized in this study. Cells of both strains were catalase- and oxidase-positive. Strain CC-CFT023(T) showed a high pairwise 16S rRNA gene sequence similarity to Aureimonas altamirensis LMG 233...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Hameed A,Liu YC,Hsu YH,Lai WA,Shen FT,Young LS,Tsai CF,Young CC

更新日期：2013-07-01 00:00:00

abstract：:A strictly aerobic, non-motile, rod-shaped actinomycete, designated strain JC2056(T), was isolated from a sediment sample of getbol, the tidal flat of Korea. Results of 16S rRNA gene sequence analysis indicated that the isolate belonged to the genus Nocardioides, with the highest similarity being to Nocardioides luteu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yi H,Chun J

更新日期：2004-11-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, motile, rod-shaped, endospore-forming bacterium, designated strain R55T, was isolated from the liverwort Herbertus sendtneri growing at Gawalong glacier, Tibet, and characterized by using a polyphasic taxonomic approach. The major fatty acids of strain R55T were anteiso-C15 : 0, C16 : 0...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo GN,Zhou X,Chen ZL,Yang ZW,Li XD,Li YH

更新日期：2016-02-01 00:00:00

abstract：:The halophilic archaeal strain, YC82(T), was isolated from Yuncheng salt lake in Shanxi, PR China. Cells from strain YC82(T) were Gram-stain negative, pleomorphic rods, which lysed in distilled water and formed light-red colonies on solid media. Strain YC82(T) grew at 25-50 °C (optimum 37 °C), in 1.4-4.8 M NaCl (optim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yuan PP,Zhang WJ,Han D,Cui HL

更新日期：2015-03-01 00:00:00

abstract：:A Gram-staining-negative, rod-shaped and non-motile bacterium, designated CL-SS4T, was isolated from crude-oil-contaminated seawater from the west coast of Korea and was investigated by means of a polyphasic taxonomic approach. Strain CL-SS4T grew optimally at 25-30 degrees C, at pH 6.8-7.7 and in the presence of 2-3%...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hwang CY,Kim MH,Bae GD,Zhang GI,Kim YH,Cho BC

更新日期：2009-08-01 00:00:00

abstract：:'Caulobacter leidyi' DSM 4733(T) has been shown to be affiliated with the family Sphingomonadaceae instead of the Caulobacteraceae, and due to its poor characterization has been omitted from the current edition of Bergey's Manual of Systematic Bacteriology and removed to limbo. We isolated a novel sphingoglycolipid-co...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen H,Jogler M,Rohde M,Klenk HP,Busse HJ,Tindall BJ,Spröer C,Overmann J

更新日期：2012-12-01 00:00:00

abstract：:A Gram-stain-negative, yellow-pigmented, non-spore-forming, non-motile, rod-shaped, catalase-positive, strictly aerobic bacterial strain, designated CAU 1491T, was isolated from seawater and its taxonomic position was examined using a polyphasic approach. Cells of strain CAU 1491T grew optimally at 30 °C, pH 7.5 and i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Janthra T,Baek J,Kim JH,Yoon JH,Sukhoom A,Kim W

更新日期：2020-08-01 00:00:00

abstract：:Thirty-two protein-encoding genes that are distributed widely among bacterial genomes were tested for the potential usefulness of their DNA sequences in assigning bacterial strains to species. From publicly available data, it was possible to make 49 pairwise comparisons of whole bacterial genomes that were related at ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zeigler DR

更新日期：2003-11-01 00:00:00

abstract：:During the taxonomic investigation of exopolymer-producing halophilic bacteria, a rod-shaped, motile, Gram-stain-negative, halophilic bacterium, designated strain N4T, was isolated from a saline soil located in northern Morocco. Optimal growth of the isolate was at 30-37 ºC and at pH 7.0-8.0, in the presence of 5-7 % ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Boujida N,Palau M,Charfi S,Manresa À,Skali Senhaji N,Abrini J,Miñana-Galbis D

更新日期：2019-01-01 00:00:00

abstract：:Four strains of a hitherto unknown bacterium isolated from vacuum-packaged refrigerated beef were characterized by using phenotypic and phylogenetic methods. The novel strains were Gram-positive, catalase-negative, psychrophilic, rod-shaped bacteria with lactic acid-homofermentative mechanism. Comparative 16S rDNA gen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sakala RM,Kato Y,Hayashidani H,Murakami M,Kaneuchi C,Ogawa M

更新日期：2002-07-01 00:00:00

abstract：:Five strains, designated WS 4672T, WS 4998, WS 4992T, WS 4997 and WS 5000, isolated from bovine raw milk formed two individual groups in a phylogenetic analysis. The most similar species on the basis of 16S rRNA gene sequences were Pseudomonas azotoformans IAM 1603T, Pseudomonas gessardii CIP 105469T and Pseudomonas l...

journal_title：International journal of systematic and evolutionary microbiology

authors： von Neubeck M,Huptas C,Glück C,Krewinkel M,Stoeckel M,Stressler T,Fischer L,Hinrichs J,Scherer S,Wenning M

更新日期：2017-06-01 00:00:00

abstract：:A Gram-negative, strictly aerobic, non-motile and non-spore-forming rod that produced white, viscous colonies, designated QH(T), was isolated from bulking sludge collected from a municipal wastewater treatment plant in Beijing, China. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain QH(T) belo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jin D,Wang P,Bai Z,Jin B,Yu Z,Wang X,Zhuang G,Zhang H

更新日期：2013-05-01 00:00:00

abstract：:A coccal strain isolated from fresh broccoli was initially identified as Enterococcus saccharolyticus; however, molecular identification and phenotypic traits did not support this identification. DNA-DNA hybridization with the type strain of E. saccharolyticus (76.4 % relatedness), DNA G+C content (35.7 mol%), phyloge...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Lin YH,Pan SF,Ji SH,Chang YC,Yu CR,Liou MS,Wu HC,Otoguro M,Yanagida F,Liao CC,Chiu CM,Huang BQ

更新日期：2013-12-01 00:00:00