Impact of recurrent gene duplication on adaptation of plant genomes.

abstract：BACKGROUND:Zinc (Zn) deficiency is one of the most widespread mineral nutritional problems that affect normal development in plants. Because Zn cannot passively diffuse across cell membranes, it must be transported into intracellular compartments for all biological processes where Zn is required. Several members of the...

journal_title：BMC plant biology

authors： Gainza-Cortés F,Pérez-Dïaz R,Pérez-Castro R,Tapia J,Casaretto JA,González S,Peña-Cortés H,Ruiz-Lara S,González E

更新日期：2012-07-23 00:00:00

abstract：BACKGROUND:Plant biologists have long speculated about the mechanisms that guide pollen tubes to ovules. Although there is now evidence that ovules emit a diffusible attractant, little is known about how this attractant mediates interactions between the pollen tube and the ovules. RESULTS:We employ a semi-in vitro ass...

journal_title：BMC plant biology

authors： Stewman SF,Jones-Rhoades M,Bhimalapuram P,Tchernookov M,Preuss D,Dinner AR

更新日期：2010-02-22 00:00:00

abstract：BACKGROUND:The acid component of grape berries, originating in the metabolism of malate and tartrate, the latter being less well-known than the former, is a key factor at play in the microbiological stability of wines destined for distillation. Grape acidity is increasingly affected by climate changes. The ability to c...

journal_title：BMC plant biology

authors： Cholet C,Claverol S,Claisse O,Rabot A,Osowsky A,Dumot V,Ferrari G,Gény L

更新日期：2016-06-28 00:00:00

abstract：BACKGROUND:Guar, Cyamopsis tetragonoloba (L.) Taub, is a member of the Leguminosae (Fabaceae) family and is economically the most important of the four species in the genus. The endosperm of guar seed is a rich source of mucilage or gum, which forms a viscous gel in cold water, and is used as an emulsifier, thickener a...

journal_title：BMC plant biology

authors： Naoumkina M,Torres-Jerez I,Allen S,He J,Zhao PX,Dixon RA,May GD

更新日期：2007-11-23 00:00:00

abstract：BACKGROUND:Until recently, only a small number of low- and mid-throughput methods have been used for single nucleotide polymorphism (SNP) discovery and genotyping in grapevine (Vitis vinifera L.). However, following completion of the sequence of the highly heterozygous genome of Pinot Noir, it has been possible to iden...

journal_title：BMC plant biology

authors： Pindo M,Vezzulli S,Coppola G,Cartwright DA,Zharkikh A,Velasco R,Troggio M

更新日期：2008-01-28 00:00:00

abstract：BACKGROUND:An interesting seed protein family with a role in preventing insect herbivory is the multi-gene, APA family encoding the alpha-amylase inhibitor, phytohemagglutinin and arcelin proteins of common bean (Phaseolus vulgaris). Variability for this gene family exists and has been exploited to breed for insect res...

journal_title：BMC plant biology

authors： Blair MW,Prieto S,Díaz LM,Buendía HF,Cardona C

更新日期：2010-04-29 00:00:00

abstract：BACKGROUND:Two component systems (TCS) are phosphotransfer-based signal transduction pathways first discovered in bacteria, where they perform most of the sensing tasks. They present a highly modular structure, comprising a receptor with histidine kinase activity and a response regulator which regulates gene expression...

journal_title：BMC plant biology

authors： Muñiz LM,Royo J,Gómez E,Baudot G,Paul W,Hueros G

更新日期：2010-05-07 00:00:00

abstract：BACKGROUND:Transcription factor HaDREB2 was identified in sunflower (Helianthus annuus L.) as a drought-responsive element-binding factor 2 (DREB2) with unique properties. HaDREB2 and the sunflower Heat Shock Factor A9 (HaHSFA9) co-activated the Hahsp17.6G1 promoter in sunflower embryos. Both factors could be involved ...

journal_title：BMC plant biology

authors： Almoguera C,Prieto-Dapena P,Díaz-Martín J,Espinosa JM,Carranco R,Jordano J

更新日期：2009-06-19 00:00:00

abstract：BACKGROUND:Photoperiodism refers to the ability of plants to measure day length to determine the season. This ability enables plants to coordinate internal biological activities with external changes to ensure normal growth. However, the influence of the photoperiod on maize flowering and stress responses under long-da...

journal_title：BMC plant biology

authors： Ku L,Tian L,Su H,Wang C,Wang X,Wu L,Shi Y,Li G,Wang Z,Wang H,Song X,Dou D,Ren Z,Chen Y

更新日期：2016-11-03 00:00:00

abstract：BACKGROUND:In cereal crops such as wheat, an optimal timing of developmental transitions is required to maximize grain yield. Many of these developmental changes are precisely regulated by changes in the duration, intensity or quality of light. Phytochromes are dimeric photoreceptors that absorb light maximally in the ...

journal_title：BMC plant biology

authors： Pearce S,Kippes N,Chen A,Debernardi JM,Dubcovsky J

更新日期：2016-06-21 00:00:00

abstract：BACKGROUND:Somatic embryogenesis is the preferred method for cell to plant regeneration in Vitis vinifera L. However, low frequencies of plant embryo conversion are commonly found. In a previous work we obtained from cut-seeds of a grapevine infected with the Grapevine leafroll associated viruses 1 and 3 (GLRaV-1 and G...

journal_title：BMC plant biology

authors： San Pedro T,Gammoudi N,Peiró R,Olmos A,Gisbert C

更新日期：2017-11-29 00:00:00

abstract：BACKGROUND:Extremely high temperatures are becoming an increasingly severe threat to crop yields. It is well documented that salicylic acid (SA) can enhance the stress tolerance of plants; however, its effect on the reproductive organs of rice plants has not been described before. To investigate the mechanism underlyin...

journal_title：BMC plant biology

authors： Feng B,Zhang C,Chen T,Zhang X,Tao L,Fu G

更新日期：2018-10-19 00:00:00

abstract：BACKGROUND:Angiosperm sex chromosomes, where present, are generally recently evolved. The key step in initiating the development of sex chromosomes from autosomes is the establishment of a sex-determining locus within a region of non-recombination. To better understand early sex chromosome evolution, it is important to...

journal_title：BMC plant biology

authors： Pilkington SM,Tahir J,Hilario E,Gardiner SE,Chagné D,Catanach A,McCallum J,Jesson L,Fraser LG,McNeilage MA,Deng C,Crowhurst RN,Datson PM,Zhang Q

更新日期：2019-04-30 00:00:00

abstract：BACKGROUND:Cannabis possesses a rich spectrum of phytochemicals i.e. cannabinoids, terpenes and phenolic compounds of industrial and medicinal interests. Most of these high-value plant products are synthesised in the disk cells and stored in the secretory cavity in glandular trichomes. Conventional trichome analysis wa...

journal_title：BMC plant biology

authors： Ebersbach P,Stehle F,Kayser O,Freier E

更新日期：2018-11-12 00:00:00

abstract：BACKGROUND:Salt stress is one of the major abiotic stresses affecting plant growth and productivity. Vacuolar H+-pyrophosphatase (H+-PPase) genes play an important role in salt stress tolerance in multiple species. RESULTS:In this study, the promoter from the vacuolar H+-pyrophosphatase from Thellungiella halophila (T...

journal_title：BMC plant biology

authors： Sun Q,Gao F,Zhao L,Li K,Zhang J

更新日期：2010-05-18 00:00:00

abstract：BACKGROUND:In nature, orchid plants depend completely on symbiotic fungi for their nutrition at the germination and the subsequent seedling (protocorm) stages. However, only limited quantitative methods for evaluating the orchid-fungus interactions at the protocorm stage are currently available, which greatly constrain...

journal_title：BMC plant biology

authors： Yamamoto T,Miura C,Fuji M,Nagata S,Otani Y,Yagame T,Yamato M,Kaminaka H

更新日期：2017-02-21 00:00:00

abstract：BACKGROUND:Wheat grain avenin-like proteins (ALPs) belong to a recently discovered class of wheat grain storage protein. ALPs in wheat grains not only have beneficial effects on dough quality but also display antifungal activities, which is a novel observation for wheat storage proteins. Previous studies have shown tha...

journal_title：BMC plant biology

authors： Zhang Y,Hu X,Juhasz A,Islam S,Yu Z,Zhao Y,Li G,Ding W,Ma W

更新日期：2020-01-29 00:00:00

abstract：BACKGROUND:Pear fruit exhibit a single sigmoid pattern during development, while peach and strawberry fruits exhibit a double sigmoid pattern. However, little is known about the differences between these two patterns. RESULTS:In this study, fruit weights were measured and paraffin sections were made from fruitlet to m...

journal_title：BMC plant biology

authors： Pei MS,Cao SH,Wu L,Wang GM,Xie ZH,Gu C,Zhang SL

更新日期：2020-03-06 00:00:00

abstract：BACKGROUND:Plant phloem consists of an interdependent cell pair, the sieve element/companion cell complex. Sucrose transporters are localized to enucleate sieve elements (SE), despite being transcribed in companion cells (CC). Due to the high turnover of SUT1, sucrose transporter mRNA or protein must traffic from CC to...

journal_title：BMC plant biology

authors： Lalonde S,Weise A,Walsh RP,Ward JM,Frommer WB

更新日期：2003-12-11 00:00:00

abstract：BACKGROUND:The production of heather (Calluna vulgaris) in Germany is highly dependent on cultivars with mutated flower morphology, the so-called diplocalyx bud bloomers. So far, this unique flower type of C. vulgaris has not been reported in any other plant species. The flowers are characterised by an extremely extend...

journal_title：BMC plant biology

authors： Behrend A,Borchert T,Hohe A

更新日期：2015-01-21 00:00:00

abstract：BACKGROUND:Roots play a central role in plant response to water stress (WS). They are involved in its perception and signalling to the leaf as well as in allowing the plant to adapt to maintaining an adequate water balance. Only a few studies have investigated the molecular/biochemical responses to WS in roots of peren...

journal_title：BMC plant biology

authors： Prinsi B,Negri AS,Failla O,Scienza A,Espen L

更新日期：2018-06-20 00:00:00

abstract：BACKGROUND:Plant cell walls are complex dynamic structures that play a vital role in coordinating the directional growth of plant tissues. The rapid elongation of the inflorescence stem in the model plant Arabidopsis thaliana is accompanied by radical changes in cell wall structure and chemistry, but analysis of the un...

journal_title：BMC plant biology

authors： Hall H,Ellis B

更新日期：2013-01-25 00:00:00

abstract：BACKGROUND:Transcription factors play the crucial rule of regulating gene expression and influence almost all biological processes. Systematically identifying and annotating transcription factors can greatly aid further understanding their functions and mechanisms. In this article, we present SoyDB, a user friendly dat...

journal_title：BMC plant biology

authors： Wang Z,Libault M,Joshi T,Valliyodan B,Nguyen HT,Xu D,Stacey G,Cheng J

更新日期：2010-01-18 00:00:00

abstract：BACKGROUND:NADP-malic enzyme (NAPD-ME), and pyruvate orthophosphate dikinase (PPDK) are important enzymes that participate in C4 photosynthesis. However, the evolutionary history and forces driving evolution of these genes in C4 plants are not completely understood. RESULTS:We identified 162 NADP-ME and 35 PPDK genes ...

journal_title：BMC plant biology

authors： Shi W,Yue L,Guo J,Wang J,Yuan X,Dong S,Guo J,Guo P

更新日期：2020-03-30 00:00:00

abstract：BACKGROUND:Sesame (Sesamum indicum L., 2n = 2x = 26) is an important oilseed crop with high oil content but small seed size. To reveal the genetic loci of the quantitative seed-related traits, we constructed a high-density single nucleotide polymorphism (SNP) linkage map of an F2 population by using specific length amp...

journal_title：BMC plant biology

authors： Du H,Zhang H,Wei L,Li C,Duan Y,Wang H

更新日期：2019-12-27 00:00:00

abstract：BACKGROUND:Cold stress causes dynamic changes in gene expression that are partially caused by small non-coding RNAs since they regulate protein coding transcripts and act in epigenetic gene silencing pathways. Thus, a detailed analysis of transcriptional changes of small RNAs (sRNAs) belonging to all known sRNA classes...

journal_title：BMC plant biology

authors： Tiwari B,Habermann K,Arif MA,Weil HL,Garcia-Molina A,Kleine T,Mühlhaus T,Frank W

更新日期：2020-06-29 00:00:00

abstract：BACKGROUND:The genus Citrus encompasses major cultivated plants such as sweet orange, mandarin, lemon and grapefruit, among the world's most economically important fruit crops. With increasing volumes of transcriptomics data available for these species, Gene Co-expression Network (GCN) analysis is a viable option for p...

journal_title：BMC plant biology

authors： Wong DC,Sweetman C,Ford CM

更新日期：2014-07-15 00:00:00

abstract：BACKGROUND:The arbuscular mycorrhizal symbiosis is characterized by the presence of different symbiotic structures and stages within a root system. Therefore tools allowing the analysis of molecular changes at a cellular level are required to reveal insight into arbuscular mycorrhizal (AM) symbiosis development and fun...

journal_title：BMC plant biology

authors： Gaude N,Bortfeld S,Erban A,Kopka J,Krajinski F

更新日期：2015-09-30 00:00:00

abstract：BACKGROUND:The sweet, floral flavor typical of Muscat varieties (Muscats), due to high levels of monoterpenoids (geraniol, linalool and nerol), is highly distinct and has been greatly appreciated both in table grapes and in wine since ancient times. Muscat flavor determination in grape (Vitis vinifera L.) has up to now...

journal_title：BMC plant biology

authors： Emanuelli F,Battilana J,Costantini L,Le Cunff L,Boursiquot JM,This P,Grando MS

更新日期：2010-11-09 00:00:00

abstract：BACKGROUND:Fusarium graminearum, one of the causal agents of Fusarium Head Blight (FHB, scab), leads to severe losses in grain yield and quality due to the production of mycotoxins which are harmful to human and livestock. Different traits for FHB resistance in wheat were identified for common wheat (Triticum aestivum ...

journal_title：BMC plant biology

authors： Lionetti V,Giancaspro A,Fabri E,Giove SL,Reem N,Zabotina OA,Blanco A,Gadaleta A,Bellincampi D

更新日期：2015-01-19 00:00:00