Whole exome sequencing in dominant cataract identifies a new causative factor, CRYBA2, and a variety of novel alleles in known genes.

Abstract:

:Pediatric cataracts are observed in 1-15 per 10,000 births with 10-25 % of cases attributed to genetic causes; autosomal dominant inheritance is the most commonly observed pattern. Since the specific cataract phenotype is not sufficient to predict which gene is mutated, whole exome sequencing (WES) was utilized to concurrently screen all known cataract genes and to examine novel candidate factors for a disease-causing mutation in probands from 23 pedigrees affected with familial dominant cataract. Review of WES data for 36 known cataract genes identified causative mutations in nine pedigrees (39 %) in CRYAA, CRYBB1, CRYBB3, CRYGC (2), CRYGD, GJA8 (2), and MIP and an additional likely causative mutation in EYA1; the CRYBB3 mutation represents the first dominant allele in this gene and demonstrates incomplete penetrance. Examination of crystallin genes not yet linked to human disease identified a novel cataract gene, CRYBA2, a member of the βγ-crystallin superfamily. The p.(Val50Met) mutation in CRYBA2 cosegregated with disease phenotype in a four-generation pedigree with autosomal dominant congenital cataracts with incomplete penetrance. Expression studies detected cryba2 transcripts during early lens development in zebrafish, supporting its role in congenital disease. Our data highlight the extreme genetic heterogeneity of dominant cataract as the eleven causative/likely causative mutations affected nine different genes, and the majority of mutant alleles were novel. Furthermore, these data suggest that less than half of dominant cataract can be explained by mutations in currently known genes.

journal_name

Hum Genet

journal_title

Human genetics

authors

Reis LM,Tyler RC,Muheisen S,Raggio V,Salviati L,Han DP,Costakos D,Yonath H,Hall S,Power P,Semina EV

doi

10.1007/s00439-013-1289-0

subject

Has Abstract

pub_date

2013-07-01 00:00:00

pages

761-70

issue

7

eissn

0340-6717

issn

1432-1203

journal_volume

132

pub_type

临床试验,杂志文章
  • Analysis of 15 primary open-angle glaucoma families from Australia identifies a founder effect for the Q368STOP mutation of myocilin.

    abstract::Primary open-angle glaucoma (POAG) is a leading cause of blindness in the world. A number of mutations in the myocilin gene have been identified that predispose to glaucoma. The most frequent of these is the Glutamine368STOP (Q368STOP) mutation. It has been postulated that individuals with the Q368STOP mutation are de...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-002-0865-5

    authors: Baird PN,Craig JE,Richardson AJ,Ring MA,Sim P,Stanwix S,Foote SJ,Mackey DA

    更新日期:2003-02-01 00:00:00

  • ASP--a simulation-based power calculator for genetic linkage studies of qualitative traits, using sib-pairs.

    abstract::An easy-to-use, simulation-based power calculator (ASP) for linkage analysis using sib-pair designs (concordant or discordant) has been developed and made publicly available via the Internet. The program employs a diallelic model for the trait locus, at which parental/offspring genotypes are simulated, assuming Hardy-...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-001-0634-x

    authors: Krawczak M

    更新日期:2001-12-01 00:00:00

  • Linkage analysis of neurofibromatosis type 1. Study of a homogeneous North Italian population with five DNA markers of chromosome 17.

    abstract::The authors report the results of a genetic analysis performed in 34 neurofibromatosis type 1 (NF1) Italian families using five loci tightly linked to NF1: D17S33, D17S82, D17S83, D17S37, and D17S36. A two-point linkage analysis was performed with the LINKAGE and the CRI-MAP programs. The map of the region was constru...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF01213101

    authors: Clementi M,Murgia A,Anglani F,Tenconi R,Turolla L,Picci L,Zacchello F

    更新日期:1991-05-01 00:00:00

  • New genomic region for Wegener's granulomatosis as revealed by an extended association screen with 202 apoptosis-related genes.

    abstract::Wegener's granulomatosis (WG) is a systemic disease with complex genetic background. It is characterized by necrotizing granulomatous inflammation of the upper and lower respiratory tract, glomerulonephritis, vasculitis and the presence of antineutrophil cytoplasmatic autoantibodies (C-ANCAs) in sera of patients. Here...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-004-1092-z

    authors: Jagiello P,Gencik M,Arning L,Wieczorek S,Kunstmann E,Csernok E,Gross WL,Epplen JT

    更新日期:2004-04-01 00:00:00

  • Assessment of autosome and gonosome disomy in human sperm nuclei by chromosome painting.

    abstract::Disomy and diploidy frequencies for autosomes 1-22 and the gonosomes were assessed in 299,442 sperm nuclei from four normal fertile men by chromosome painting. This novel approach allowed us to perform a specific and sensitive detection of each chromosome. A minimum of 5000 sperm nuclei per subject were evaluated for ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s004390050751

    authors: Rives N,Mazurier S,Bellet D,Joly G,Macé B

    更新日期:1998-06-01 00:00:00

  • Chromosome abnormalities and clinical and morphologic manifestations of chronic myeloid leukemia.

    abstract::Forty cases of chronic myeloid leukemia (CML) were studied and subgroups of cases with similar chromosomal abnormalities in terminal stage were defined. Certain correlations were observed between the type of chromosomal changes, and clinical and morphologic manifestations of the disease: (1) It seems that, in cases wi...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00273096

    authors: Prigogina EL,Fleischman EW,Volkova MA,Frenkel MA

    更新日期:1978-03-17 00:00:00

  • Lipoprotein lipase gene is in linkage with blood pressure phenotypes in Chinese pedigrees.

    abstract::To elucidate the mechanism of lipid metabolism in the genesis of essential hypertension (EH), we linked blood pressure (BP) phenotypes with the lipoprotein lipase (LPL) gene. Variance component and sib-pair linkage models were used to test the relationship of the polymorphisms in the LPL gene region and EH in 148 Chin...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-004-1108-8

    authors: Yang W,Huang J,Ge D,Yao C,Duan X,Shen Y,Qiang B,Gu D

    更新日期:2004-06-01 00:00:00

  • A new locus for split hand/foot malformation with long bone deficiency (SHFLD) at 2q14.2 identified from a chromosome translocation.

    abstract::Split hand/foot malformation (SHFM) with long bone deficiency (SHFLD) is a distinct entity in the spectrum of ectrodactylous limb malformations characterised by associated tibial a/hypoplasia. Pedigrees with multiple individuals affected by SHFLD often include non-penetrant intermediate relatives, making genetic mappi...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-007-0390-7

    authors: Babbs C,Heller R,Everman DB,Crocker M,Twigg SR,Schwartz CE,Giele H,Wilkie AO

    更新日期:2007-09-01 00:00:00

  • Hunter syndrome: presence of material cross-reacting with antibodies against iduronate sulfatase.

    abstract::Polyclonal antibodies were obtained from rabbits by injection of iduronate sulfatase purified 35,000-fold from human placenta, after elution of the enzyme from sodium dodecyl sulfate (SDS) polyacrylamide gels. The specificity of these antibodies towards iduronate sulfatase was demonstrated by immunoprecipitation of en...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00281065

    authors: Daniele A,Di Natale P

    更新日期:1987-03-01 00:00:00

  • Glucokinase regulatory protein gene polymorphism affects postprandial lipemic response in a dietary intervention study.

    abstract::Postprandial triglyceridemia is an emerging risk factor for cardiovascular disease. However, most of the genes that influence postprandial triglyceridemia are not known. We evaluated whether a common nonsynonymous SNP rs1260326/P446L in the glucokinase regulatory protein (GCKR) gene influenced variation in the postpra...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-009-0700-3

    authors: Shen H,Pollin TI,Damcott CM,McLenithan JC,Mitchell BD,Shuldiner AR

    更新日期:2009-10-01 00:00:00

  • The T-->C mutation at position +96 of the untranslated region 3' to the terminating codon of the beta-globin gene is a rare polymorphism that does not cause a beta-thalassemia as previously ascribed.

    abstract::We have observed a T-->C mutation at position +96 of the untranslated region 3' to the terminating codon of the beta-globin gene in members of two Czech families and one black family. Data from initial studies suggested that this change was the cause of a beta-thalassemia, but continued analyses have provided convinci...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00218918

    authors: Divoky V,Baysal E,Oner R,Cürük MA,Walker EL 3rd,Indrak K,Huisman TH

    更新日期:1994-01-01 00:00:00

  • A girl with the Prader-Willi syndrome and Robertsonian translocation 45,XX,t(14;15)(p11;q11) which was present in three normal family members.

    abstract::A 21-year-old girl with classical Prader-Willi Syndrome was found to have a 14;15 Robertsonian translocation--45,XX,t(14;15)(p11;q11). This type of Robertsonian translocation was not found in any patient from 8 surveys covering 6144 patients with mental retardation. Chromosome 15 has been involved in translocations in...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00291777

    authors: Smith A,Noel M

    更新日期:1980-01-01 00:00:00

  • Hypomagnesemia with secondary hypocalcemia in a female with balanced X;9 translocation: mapping of the Xp22 chromosome breakpoint.

    abstract::Magnesium-dependent hypocalcaemia (HSH), a rare inherited disease, is caused by selective disorders of magnesium absorption. Both X-linked and autosomal recessive modes of inheritance have been reported for HSH; this suggests a genetically heterogeneous condition. A balanced de novo t(X;9)(p22;q12) translocation has b...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00202829

    authors: Chery M,Biancalana V,Philippe C,Malpuech G,Carla H,Gilgenkrantz S,Mandel JL,Hanauer A

    更新日期:1994-05-01 00:00:00

  • Mutation analysis of the coding sequence of the MECP2 gene in infantile autism.

    abstract::Mutations in the coding region of the methyl-CpG-binding protein 2 ( MECP2) gene cause Rett syndrome and have also been reported in a number of X-linked mental retardation syndromes. Furthermore, such mutations have recently been described in a few autistic patients. In this study, a large sample of individuals with a...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-002-0786-3

    authors: Beyer KS,Blasi F,Bacchelli E,Klauck SM,Maestrini E,Poustka A,International Molecular Genetic Study of Autism Consortium (IMGSAC).

    更新日期:2002-10-01 00:00:00

  • Kalirin: a novel genetic risk factor for ischemic stroke.

    abstract::Cerebrovascular and cardiovascular diseases are the leading causes of death and disability worldwide. They are complex disorders resulting from the interplay of genetic and environmental factors, and may share several susceptibility genes. Several recent studies have implicated variants of the Kalirin (KALRN) gene wit...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-010-0790-y

    authors: Krug T,Manso H,Gouveia L,Sobral J,Xavier JM,Albergaria I,Gaspar G,Correia M,Viana-Baptista M,Simões RM,Pinto AN,Taipa R,Ferreira C,Fontes JR,Silva MR,Gabriel JP,Matos I,Lopes G,Ferro JM,Vicente AM,Oliveira SA

    更新日期:2010-03-01 00:00:00

  • Electrophoretic variants of blood proteins in Japanese. III. Triosephosphate isomerase.

    abstract::A total of 15,387 individuals living in Hiroshima and Nagasaki, of whom 10,864 are unrelated, were examined for erythrocyte triosephosphate isomerase (TPI) by starch gel electrophoresis using TEMM buffer, pH 7.4. Four kinds of new variants, one having a cathodal migration and three having anodal migrations, were encou...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00279312

    authors: Asakawa J,Satoh C,Takahashi N,Fujita M,Kaneko J,Goriki K,Hazama R,Kageoka T

    更新日期:1984-01-01 00:00:00

  • Flies deficient in Muscleblind protein model features of myotonic dystrophy with altered splice forms of Z-band associated transcripts.

    abstract::Myotonic dystrophy (DM) is a dominantly inherited neuromuscular disorder characterised by muscle weakness and wasting. There are two forms of DM; both of which are caused by the expansion of repeated DNA sequences. DM1 is associated with a CTG repeat located in the 3' untranslated region of a gene, DMPK and DM2 with a...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-006-0228-8

    authors: Machuca-Tzili L,Thorpe H,Robinson TE,Sewry C,Brook JD

    更新日期:2006-11-01 00:00:00

  • Variability of X chromosome inactivation: effect on levels of TIMP1 RNA and role of DNA methylation.

    abstract::X chromosome inactivation results in dosage equivalency for X-linked gene expression between males and females. However, some X-linked genes show variable X inactivation, being expressed from the inactive X in some females but subject to inactivation in other women. The human tissue inhibitor of metalloproteinases-1 (...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-002-0676-8

    authors: Anderson CL,Brown CJ

    更新日期:2002-03-01 00:00:00

  • Highly polymorphic dinucleotide repeat at the NF2 gene.

    abstract::A highly polymorphic CA repeat was identified in a cosmid containing the 5' end of the NF2 tumour suppressor gene. This marker has proved useful in presymptomatic diagnosis in affected families. ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00209494

    authors: Bourn D,Strachan T

    更新日期:1995-06-01 00:00:00

  • Nature and frequency of mutations in the argininosuccinate synthetase gene that cause classical citrullinemia.

    abstract::Citrullinemia is an autosomal recessive disorder caused by a genetic deficiency of argininosuccinate synthetase (ASS). So far 20 mutations in ASS mRNA have been identified in human classical citrullinemia, including 14 single base changes causing missense mutations in the coding sequence of the enzyme, 4 mutations ass...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00191806

    authors: Kobayashi K,Kakinoki H,Fukushige T,Shaheen N,Terazono H,Saheki T

    更新日期:1995-10-01 00:00:00

  • A case of autism and uniparental disomy of chromosome 1.

    abstract::We report a male child with autism found to have maternal uniparental disomy (UPD) of chromosome 1. The child met diagnostic criteria for the three symptom domains of autism: language impairment, deficient social communication and excessively rigid and repetitive behaviours. He also had a variety of features often ass...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-005-1257-4

    authors: Wassink TH,Losh M,Frantz RS,Vieland VJ,Goedken R,Piven J,Sheffield VC

    更新日期:2005-07-01 00:00:00

  • DGGE screening of PKD1 gene reveals novel mutations in a large cohort of 146 unrelated patients.

    abstract::Autosomal dominant polycystic kidney disease (ADPKD) is one of the most commonly inherited renal diseases. ADPKD is a genetically heterogeneous disorder involving at least three different genes. PKD1, the major locus mapped to chromosome 16p13.3 accounts for approximately 85% of ADPKD cases. The search for mutations i...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s004390051094

    authors: Perrichot RA,Mercier B,Simon PM,Whebe B,Cledes J,Ferec C

    更新日期:1999-09-01 00:00:00

  • Meiotic arrest at first spermatocyte level: a new inherited infertility disorder.

    abstract::Three 46,XY phenotypically male, azoospermic brothers out of thirteen sibs from a consanguineous marriage were studied and found to have a unique pattern of testicular histology with arrest of spermatogenesis at the pachytene stage of primary spermatocytes. Endocrinological evaluation showed elevated plasma luteinizin...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00295476

    authors: Cantú JM,Rivas F,Hernández-Jáuregui P,Díaz M,Cortés-Gallegos V,Vaca G,Velázquez A,Ibarra B

    更新日期:1981-01-01 00:00:00

  • Linkage and sequence analysis indicate that CCBE1 is mutated in recessively inherited generalised lymphatic dysplasia.

    abstract::Generalised lymphatic dysplasia (GLD) is characterised by extensive peripheral lymphoedema with visceral involvement. In some cases, it presents in utero with hydrops fetalis. Autosomal dominant and recessive inheritance has been reported. A large, non-consanguineous family with three affected siblings with generalise...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-009-0766-y

    authors: Connell F,Kalidas K,Ostergaard P,Brice G,Homfray T,Roberts L,Bunyan DJ,Mitton S,Mansour S,Mortimer P,Jeffery S,Lymphoedema Consortium.

    更新日期:2010-02-01 00:00:00

  • A female infant with monosomy 21.

    abstract::A female infant with total monosomy 21 identified by Q banding is described. The main clinical features were hypertonia, prominent occiput, hypertelorism, antimongoloid slant of the eyes, broad nose, "antimongoloid", character of dermatoglyphics. Both parents are phenotypically as well as karyotypically normal. ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00270866

    authors: Dziuba P,Dziekanowska D,Hübner H

    更新日期:1976-03-12 00:00:00

  • CRISPR/Cas9-mediated somatic and germline gene correction to restore hemostasis in hemophilia B mice.

    abstract::Hemophilia B (HB) is an X-linked disorder caused by defects of F9 encoded coagulation factor IX, which is an ideal model for gene therapy. Most existing HB gene therapies are based on viral mediated gene supplementation, which could increase immunoreaction. In this study, CRISPR/Cas9 system was used for gene correctio...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-017-1801-z

    authors: Huai C,Jia C,Sun R,Xu P,Min T,Wang Q,Zheng C,Chen H,Lu D

    更新日期:2017-07-01 00:00:00

  • Genetic heterogeneity of severe von Willebrand disease type III in the German population.

    abstract::The genetic heterogeneity of severe von Willebrand disease (vWd) type III was estimated by analysing extended haplotypes of eleven intragenic restriction fragment length polymorphisms and one variable number of tandem repeat polymorphism in 32 patients from 28 families from Germany or of German origin. All patients we...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00206958

    authors: Schneppenheim R,Krey S,Bergmann F,Bock D,Budde U,Lange M,Linde R,Mittler U,Meili E,Mertes G

    更新日期:1994-12-01 00:00:00

  • Breakpoint mapping and haplotype analysis of three reciprocal translocations identify a novel recurrent translocation in two unrelated families: t(4;11)(p16.2;p15.4).

    abstract::The majority of constitutional reciprocal translocations appear to be unique rearrangements arising from independent events. However, a small number of translocations are recurrent, most significantly the t(11;22)(q23;q11). Among large series of translocations there may be multiple independently ascertained cases with...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-008-0611-8

    authors: Thomas NS,Maloney V,Bryant V,Huang S,Brewer C,Lachlan K,Jacobs PA

    更新日期:2009-03-01 00:00:00

  • Osteogenesis imperfecta due to recurrent point mutations at CpG dinucleotides in the COL1A1 gene of type I collagen.

    abstract::Most individuals with osteogenesis imperfecta (OI) are heterozygous for dominant mutations in one of the genes that encode the chains of type I collagen. Each of the more than 30 mutations characterized to date has been unique to the affected member(s) of the family. We have determined that two individuals with a prog...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF01213088

    authors: Pruchno CJ,Cohn DH,Wallis GA,Willing MC,Starman BJ,Zhang XM,Byers PH

    更新日期:1991-05-01 00:00:00

  • Cytologic observations in 35 individuals with a 5p- karyotype.

    abstract::Chromosome investigation of 35 individuals with a 5p- karyotype and their families revealed the presence of 27 apparently terminal deletions, four interstitial deletions, and four translocations, including two familial cases. Four of the probands with simple deletions and one of the mother were mosaics. Unusual chromo...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00283634

    authors: Niebuhr E

    更新日期:1978-06-09 00:00:00