Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris.

abstract：BACKGROUND:Plant microRNAs (miRNAs) are a class of small, non-coding RNAs that play an important role in development and environmental responses. Hundreds of plant miRNAs have been identified to date, mainly from the model species for which there are available genome sequences. The current challenge is to characterise ...

journal_title：BMC plant biology

authors： Varkonyi-Gasic E,Gould N,Sandanayaka M,Sutherland P,MacDiarmid RM

更新日期：2010-08-04 00:00:00

abstract：BACKGROUND:Cultivated rice species (Oryza sativa L. and O. glaberrima Steud.) are generally considered among the crop species most sensitive to salt stress. A handful of lines are known to be tolerant, and a small number of these have been used extensively as donors in breeding programs. However, these donors use many ...

journal_title：BMC plant biology

authors： Platten JD,Egdane JA,Ismail AM

更新日期：2013-02-27 00:00:00

abstract：BACKGROUND:Because flavonoids and trichomes play crucial roles in plant defence, their formation requires fine transcriptional control by multiple transcription factor families. However, little is known regarding the mechanism of the R2R3-MYB transcription factors that regulate both flavonoid metabolism and trichome de...

journal_title：BMC plant biology

authors： Huang Y,Wu Q,Wang S,Shi J,Dong Q,Yao P,Shi G,Xu S,Deng R,Li C,Chen H,Zhao H

更新日期：2019-06-18 00:00:00

abstract：BACKGROUND:Photosynthesis plays a vital role as an energy source for plant metabolism, and its efficiency may be drastically reduced owing to abiotic stresses. Moso bamboo (Phyllostachys edulis), is a renewable and versatile resource with significant ecological and economic value, which encounters high light stress wit...

journal_title：BMC plant biology

authors： Zhao H,Lou Y,Sun H,Li L,Wang L,Dong L,Gao Z

更新日期：2016-01-28 00:00:00

abstract：BACKGROUND:Good establishment is important for rapid leaf area development in wheat crops. Poor establishment results in fewer, later-emerging plants, reduced leaf area and tiller number. In addition, poorly established crops suffer from increased soil moisture loss through evaporation and greater competition from weed...

journal_title：BMC plant biology

authors： Bovill WD,Hyles J,Zwart AB,Ford BA,Perera G,Phongkham T,Brooks BJ,Rebetzke GJ,Hayden MJ,Hunt JR,Spielmeyer W

更新日期：2019-07-29 00:00:00

abstract：BACKGROUND:Mitogen-activated protein kinase kinase kinases (MAPKKKs; MAP3Ks) are important components of MAPK cascades, which are highly conserved signal transduction pathways in animals, yeast and plants, play important roles in plant growth and development. MAPKKKs have been investigated on their evolution and expres...

journal_title：BMC plant biology

authors： Wang G,Lovato A,Polverari A,Wang M,Liang YH,Ma YC,Cheng ZM

更新日期：2014-08-27 00:00:00

abstract：BACKGROUND:Identification of loci for grain yield (GY) and related traits, and dissection of the genetic architecture are important for yield improvement through marker-assisted selection (MAS). Two genome-wide association study (GWAS) methods were used on a diverse panel of 166 elite wheat varieties from the Yellow an...

journal_title：BMC plant biology

authors： Li F,Wen W,Liu J,Zhang Y,Cao S,He Z,Rasheed A,Jin H,Zhang C,Yan J,Zhang P,Wan Y,Xia X

更新日期：2019-04-29 00:00:00

abstract：BACKGROUND:Little information is available on the amelioration of boron (B) on aluminum (Al)-induced photosynthesis inhibition. Sour pummelo (Citrus grandis) seedlings were irrigated for 18 weeks with nutrient solution containing 4 B levels (2.5, 10, 25 and 50 microM H3BO3) x 2 Al levels (0 and 1.2 mM AlCl3.6H2O). The ...

journal_title：BMC plant biology

authors： Jiang HX,Tang N,Zheng JG,Chen LS

更新日期：2009-08-01 00:00:00

abstract：BACKGROUND:Among various pests, the brown planthopper (BPH) that damages rice is the major destructive pests. Understanding resistance mechanisms is a critical step toward effective control of BPH. This study investigates the proteomics of BPH interactions with three rice cultivars: the first resistant (PR) to BPH, the...

journal_title：BMC plant biology

authors： Zhang X,Yin F,Xiao S,Jiang C,Yu T,Chen L,Ke X,Zhong Q,Cheng Z,Li W

更新日期：2019-01-18 00:00:00

abstract：BACKGROUND:Restriction-site associated DNA sequencing (RADseq) technology was recently employed to identify a large number of single nucleotide polymorphisms (SNP) for linkage mapping of a North American and Eastern Asian Populus species. However, there is also the need for high-density genetic linkage maps for the Eur...

journal_title：BMC plant biology

authors： Zhigunov AV,Ulianich PS,Lebedeva MV,Chang PL,Nuzhdin SV,Potokina EK

更新日期：2017-11-14 00:00:00

abstract：BACKGROUND:Whole-genome physical maps facilitate genome sequencing, sequence assembly, mapping of candidate genes, and the design of targeted genetic markers. An automated protocol was used to construct a Vitis vinifera 'Cabernet Sauvignon' physical map. The quality of the result was addressed with regard to the effect...

journal_title：BMC plant biology

authors： Moroldo M,Paillard S,Marconi R,Fabrice L,Canaguier A,Cruaud C,De Berardinis V,Guichard C,Brunaud V,Le Clainche I,Scalabrin S,Testolin R,Di Gaspero G,Morgante M,Adam-Blondon AF

更新日期：2008-06-13 00:00:00

abstract：BACKGROUND:Fusarium verticillioides is a common maize pathogen causing ear rot (FER) and contamination of the grains with the fumonisin B1 (FB1) mycotoxin. Resistance to FER and FB1 contamination are quantitative traits, affected by environmental conditions, and completely resistant maize genotypes to the pathogen are ...

journal_title：BMC plant biology

authors： Maschietto V,Colombi C,Pirona R,Pea G,Strozzi F,Marocco A,Rossini L,Lanubile A

更新日期：2017-01-21 00:00:00

abstract：BACKGROUND:Symptoms of grapevine leafroll disease (GLRD) in red-fruited wine grape (Vitis vinifera L.) cultivars consist of green veins and red and reddish-purple discoloration of inter-veinal areas of leaves. The reddish-purple color of symptomatic leaves may be due to the accumulation of anthocyanins and could reflec...

journal_title：BMC plant biology

authors： Gutha LR,Casassa LF,Harbertson JF,Naidu RA

更新日期：2010-08-23 00:00:00

abstract：BACKGROUND:Dissecting the genetic basis and regulatory mechanisms for the biosynthesis and accumulation of nutrients in maize could lead to the improved nutritional quality of this crop. Gene expression is regulated at the genomic, transcriptional, and post-transcriptional levels, all of which can produce diversity amo...

journal_title：BMC plant biology

authors： Xu X,Wang M,Li L,Che R,Li P,Pei L,Li H

更新日期：2017-10-16 00:00:00

abstract：BACKGROUND:Drought is a major abiotic stress factors that reduces agricultural productivity. GRAS transcription factors are plant-specific proteins that play diverse roles in plant development. However, the functions of a number of GRAS genes identified in rice are unknown, especially the GRAS genes related to rice dro...

journal_title：BMC plant biology

authors： Xu K,Chen S,Li T,Ma X,Liang X,Ding X,Liu H,Luo L

更新日期：2015-06-13 00:00:00

abstract：BACKGROUND:Grapevine powdery mildew Erysiphe necator is a major fungal disease in all grape growing countries worldwide. Breeding for resistance to this disease is crucial to avoid extensive fungicide applications that are costly, labor intensive and may have detrimental effects on the environment. In the past decade, ...

journal_title：BMC plant biology

authors： Pap D,Riaz S,Dry IB,Jermakow A,Tenscher AC,Cantu D,Oláh R,Walker MA

更新日期：2016-07-29 00:00:00

abstract：BACKGROUND:The normal growth of Rehmannia glutinosa, a widely used medicinal plant in China, is severely disturbed by replant disease. The formation of replant disease commonly involves interactions among plants, allelochemicals and microbes; however, these relationships remain largely unclear. As a result, no effectiv...

journal_title：BMC plant biology

authors： Li M,Yang Y,Feng F,Zhang B,Chen S,Yang C,Gu L,Wang F,Zhang J,Chen A,Lin W,Chen X,Zhang Z

更新日期：2017-07-10 00:00:00

abstract：BACKGROUND:Arabidopsis ovules comprise four morphologically distinct parts: the nucellus, which contains the embryo sac, two integuments that become the seed coat, and the funiculus that anchors the ovule within the carpel. Analysis of developmental mutants has shown that ovule morphogenesis relies on tightly regulated...

journal_title：BMC plant biology

authors： Skinner DJ,Gasser CS

更新日期：2009-03-16 00:00:00

abstract：BACKGROUND:The roles in photosystem I (PSI) assembly of the nucleus-encoded thylakoid protein Y3IP1 who interacts with the plastid-encoded Ycf3 protein that has been well-characterized in plants. However, its function and potential mechanisms in other aspects remain poorly understood. RESULTS:We identified the apple M...

journal_title：BMC plant biology

authors： Yu JQ,Wang JH,Sun CH,Zhang QY,Hu DG,Hao YJ

更新日期：2018-01-20 00:00:00

abstract：BACKGROUND:Drought conditions adversely affect soybean growth, resulting in severe yield losses worldwide. Increasing experimental evidence indicates miRNAs are important post-transcriptional regulators of gene expression. However, the drought-responsive molecular mechanism underlying miRNA-mRNA interactions remains la...

journal_title：BMC plant biology

authors： Zhou Y,Liu W,Li X,Sun D,Xu K,Feng C,Kue Foka IC,Ketehouli T,Gao H,Wang N,Dong Y,Wang F,Li H

更新日期：2020-05-05 00:00:00

abstract：BACKGROUND:Berry size is considered as one of the main selection criteria in table grape breeding programs. However, this is a quantitative and polygenic trait, and its genetic determination is still poorly understood. Considering its economic importance, it is relevant to determine its genetic architecture and elucida...

journal_title：BMC plant biology

authors： Muñoz-Espinoza C,Di Genova A,Correa J,Silva R,Maass A,González-Agüero M,Orellana A,Hinrichsen P

更新日期：2016-04-26 00:00:00

abstract：BACKGROUND:CRISPR/Cas9 gene editing has become a revolutionary technique for crop improvement as it can facilitate fast and efficient genetic changes without the retention of transgene components in the final plant line. Lack of robust bioinformatics tools to facilitate the design of highly specific functional guide RN...

journal_title：BMC plant biology

authors： Cram D,Kulkarni M,Buchwaldt M,Rajagopalan N,Bhowmik P,Rozwadowski K,Parkin IAP,Sharpe AG,Kagale S

更新日期：2019-11-06 00:00:00

abstract：BACKGROUND:The identification of QTL involved in heterosis formation is one approach to unravel the not yet fully understood genetic basis of heterosis - the improved agronomic performance of hybrid F1 plants compared to their inbred parents. The identification of candidate genes underlying a QTL is important both for ...

journal_title：BMC plant biology

authors： Thiemann A,Fu J,Seifert F,Grant-Downton RT,Schrag TA,Pospisil H,Frisch M,Melchinger AE,Scholten S

更新日期：2014-04-02 00:00:00

abstract：BACKGROUND:Jasmonates play an important role in plant stress and defence responses and are also involved in the regulation of anthocyanin synthesis in response to sucrose availability. Here we explore the signalling interactions between sucrose and jasmonates in response to cold stress in Arabidopsis. RESULTS:Sucrose ...

journal_title：BMC plant biology

authors： Wingler A,Tijero V,Müller M,Yuan B,Munné-Bosch S

更新日期：2020-04-22 00:00:00

abstract：BACKGROUND:The ripening of grape berry is generally regulated by abscisic acid (ABA), and has no relationship with ethylene function. However, functional interaction and synergism between ABA and ethylene during the beginning of grape berry ripening (véraison) has been found recently. RESULTS:The expressions of VvNCED...

journal_title：BMC plant biology

authors： Sun L,Zhang M,Ren J,Qi J,Zhang G,Leng P

更新日期：2010-11-22 00:00:00

abstract：BACKGROUND:Homeostasis of the proteome is critical to the development of chloroplasts and also affects the expression of certain nuclear genes. CLPC1 facilitates the translocation of chloroplast pre-proteins and mediates protein degradation. RESULTS:We found that proteins involved in photosynthesis are dramatically de...

journal_title：BMC plant biology

authors： Zhang S,Zhang H,Xia Y,Xiong L

更新日期：2018-09-12 00:00:00

abstract：BACKGROUND:Abscisic acid (ABA) and sucrose act as molecular signals in response to abiotic stress. However, how their synergy regulates the source-sink relationship has rarely been studied. This study aimed to reveal the mechanism underlying the synergy between ABA and sucrose on assimilates allocation to improve grain...

journal_title：BMC plant biology

authors： Chen T,Li G,Islam MR,Fu W,Feng B,Tao L,Fu G

更新日期：2019-11-27 00:00:00

abstract：BACKGROUND:Recurrent gene duplication and retention played an important role in angiosperm genome evolution. It has been hypothesized that these processes contribute significantly to plant adaptation but so far this hypothesis has not been tested at the genome scale. RESULTS:We studied available sequenced angiosperm g...

journal_title：BMC plant biology

authors： Fischer I,Dainat J,Ranwez V,Glémin S,Dufayard JF,Chantret N

更新日期：2014-05-31 00:00:00

abstract：BACKGROUND:Brassica includes many successfully cultivated crop species of polyploid origin, either by ancestral genome triplication or by hybridization between two diploid progenitors, displaying complex repetitive sequences and transposons. The U's triangle, which consists of three diploids and three amphidiploids, is...

journal_title：BMC plant biology

authors： Jiang J,Wang Y,Zhu B,Fang T,Fang Y,Wang Y

更新日期：2015-01-27 00:00:00

abstract：BACKGROUND:A large number of genetic variations have been identified in rice. Such variations must in many cases control phenotypic differences in abiotic stress tolerance and other traits. A single feature polymorphism (SFP) is an oligonucleotide array-based polymorphism which can be used for identification of SNPs or...

journal_title：BMC plant biology

authors： Kim SH,Bhat PR,Cui X,Walia H,Xu J,Wanamaker S,Ismail AM,Wilson C,Close TJ

更新日期：2009-05-29 00:00:00