Mutations in 3 genes (MKS3, CC2D2A and RPGRIP1L) cause COACH syndrome (Joubert syndrome with congenital hepatic fibrosis).

Abstract:

OBJECTIVE:To identify genetic causes of COACH syndrome BACKGROUND:COACH syndrome is a rare autosomal recessive disorder characterised by Cerebellar vermis hypoplasia, Oligophrenia (developmental delay/mental retardation), Ataxia, Coloboma, and Hepatic fibrosis. The vermis hypoplasia falls in a spectrum of mid-hindbrain malformation called the molar tooth sign (MTS), making COACH a Joubert syndrome related disorder (JSRD). METHODS:In a cohort of 251 families with JSRD, 26 subjects in 23 families met criteria for COACH syndrome, defined as JSRD plus clinically apparent liver disease. Diagnostic criteria for JSRD were clinical findings (intellectual impairment, hypotonia, ataxia) plus supportive brain imaging findings (MTS or cerebellar vermis hypoplasia). MKS3/TMEM67 was sequenced in all subjects for whom DNA was available. In COACH subjects without MKS3 mutations, CC2D2A, RPGRIP1L and CEP290 were also sequenced. RESULTS:19/23 families (83%) with COACH syndrome carried MKS3 mutations, compared to 2/209 (1%) with JSRD but no liver disease. Two other families with COACH carried CC2D2A mutations, one family carried RPGRIP1L mutations, and one lacked mutations in MKS3, CC2D2A, RPGRIP1L and CEP290. Liver biopsies from three subjects, each with mutations in one of the three genes, revealed changes within the congenital hepatic fibrosis/ductal plate malformation spectrum. In JSRD with and without liver disease, MKS3 mutations account for 21/232 families (9%). CONCLUSIONS:Mutations in MKS3 are responsible for the majority of COACH syndrome, with minor contributions from CC2D2A and RPGRIP1L; therefore, MKS3 should be the first gene tested in patients with JSRD plus liver disease and/or coloboma, followed by CC2D2A and RPGRIP1L.

journal_name

J Med Genet

authors

Doherty D,Parisi MA,Finn LS,Gunay-Aygun M,Al-Mateen M,Bates D,Clericuzio C,Demir H,Dorschner M,van Essen AJ,Gahl WA,Gentile M,Gorden NT,Hikida A,Knutzen D,Ozyurek H,Phelps I,Rosenthal P,Verloes A,Weigand H,Chance

doi

10.1136/jmg.2009.067249

subject

Has Abstract

pub_date

2010-01-01 00:00:00

pages

8-21

issue

1

eissn

0022-2593

issn

1468-6244

pii

jmg.2009.067249

journal_volume

47

pub_type

杂志文章
  • Autosomal dominant sacral agenesis: Currarino syndrome.

    abstract::Autosomal dominant sacral agenesis is characterised by a partial agenesis of the sacrum typically involving sacral vertebrae S2-S5 only. Associated features include anorectal malformation, a presacral mass, and urogenital malformation. Together, these features have been defined as the Currarino syndrome. Recently, HLX...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1136/jmg.37.8.561

    authors: Lynch SA,Wang Y,Strachan T,Burn J,Lindsay S

    更新日期:2000-08-01 00:00:00

  • Familial dentinogenesis imperfecta, blue sclerae, and wormian bones without fractures: another type of osteogenesis imperfecta?

    abstract::A unique connective tissue disorder characterised by the triad of dentinogenesis imperfecta, blue sclerae, and multiple wormian bones has been identified in 20 members of three generations of a large kindred of mixed ancestry in South Africa. The skeletons of affected subjects were moderately osteoporotic but, apart f...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.18.2.124

    authors: Beighton P

    更新日期:1981-04-01 00:00:00

  • CCMG practice guideline: laboratory guidelines for next-generation sequencing.

    abstract::PurposeThe purpose of this document is to provide guidance for the use of next-generation sequencing (NGS, also known as massively parallel sequencing or MPS) in Canadian clinical genetic laboratories for detection of genetic variants in genomic DNA and mitochondrial DNA for inherited disorders, as well as somatic var...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2019-106152

    authors: Hume S,Nelson TN,Speevak M,McCready E,Agatep R,Feilotter H,Parboosingh J,Stavropoulos DJ,Taylor S,Stockley TL,Canadian College of Medical Geneticists (CCMG).

    更新日期:2019-12-01 00:00:00

  • Homozygous beta thalassaemia in Liberia.

    abstract::The clinical and haematological findings in 19 Liberians probably homozygous for beta thalassaemia are described. The haemoglobin patterns were similar with Hb F levels in the 30-50% range and a raised level of Hb A2 and, although the clinical severity varied widely, over half the cases were symptomless and even the m...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.12.2.165

    authors: Willcox MC,Weatherall DJ,Clegg JB

    更新日期:1975-06-01 00:00:00

  • Confirmation of mutations in PROSC as a novel cause of vitamin B 6 -dependent epilepsy.

    abstract::Vitamin-B6-dependent epilepsies are a heterogenous group of treatable disorders due to mutations in several genes (ALDH7A1, PNPO, ALPL or ALDH4A1). In neonatal seizures, defects in ALDH7A1 and PNPO explain a major fraction of cases. Very recently biallelic mutations in PROSC were shown to be a novel cause in five fami...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2017-104521

    authors: Plecko B,Zweier M,Begemann A,Mathis D,Schmitt B,Striano P,Baethmann M,Vari MS,Beccaria F,Zara F,Crowther LM,Joset P,Sticht H,Papuc SM,Rauch A

    更新日期:2017-12-01 00:00:00

  • Clinical and molecular features of the immunodysregulation, polyendocrinopathy, enteropathy, X linked (IPEX) syndrome.

    abstract::Immunodysregulation, polyendocrinopathy, enteropathy, X linked (IPEX, OMIM 304790) is a rare, recessive disorder resulting in aggressive autoimmunity and early death. Mutations in FOXP3 have been identified in 13 of 14 patients tested. Research in the mouse model, scurfy, suggests that autoimmunity may stem from a lac...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1136/jmg.39.8.537

    authors: Wildin RS,Smyk-Pearson S,Filipovich AH

    更新日期:2002-08-01 00:00:00

  • Recurrence of the D409H mutation in Spanish Gaucher disease patients: description of a new homozygous patient and haplotype analysis.

    abstract::Gaucher disease results, in most patients, from mutations in the gene encoding glucocerebrosidase. Mutation D409H is the third most frequent in Spanish patients, accounting for 5.7% of all mutated alleles. This allele is associated mainly with the neurological forms of the disease. Recently, homozygosity for the D409H...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.35.9.775

    authors: Chabás A,Gort L,Montfort M,Castelló F,Domínguez MC,Grinberg D,Vilageliu L

    更新日期:1998-09-01 00:00:00

  • A paradigm shift in the delivery of services for diagnosis of inherited retinal disease.

    abstract:OBJECTIVES:Current technologies for delivering gene testing are labour-intensive and expensive. Over the last 3 years, new high-throughput DNA sequencing techniques (next generation sequencing; NGS), with the capability to analyse multiple genes or entire genomes, have been rapidly adopted into research. This study exa...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2012-100847

    authors: O'Sullivan J,Mullaney BG,Bhaskar SS,Dickerson JE,Hall G,O'Grady A,Webster A,Ramsden SC,Black GC

    更新日期:2012-05-01 00:00:00

  • Segregation of mitochondrial DNA mutations in the human placenta: implication for prenatal diagnosis of mtDNA disorders.

    abstract:BACKGROUND:Mitochondrial DNA (mtDNA) disorders have a high clinical variability, mainly explained by variation of the mutant load across tissues. The high recurrence risk of these serious diseases commonly results in requests from at-risk couples for prenatal diagnosis (PND), based on determination of the mutant load o...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2017-104615

    authors: Vachin P,Adda-Herzog E,Chalouhi G,Elie C,Rio M,Rondeau S,Gigarel N,Jabot Hanin F,Monnot S,Borghese R,Bengoa J,Ville Y,Rotig A,Munnich A,Bonnefont JP,Steffann J

    更新日期:2018-02-01 00:00:00

  • De novo partial trisomy 15q (proximal type).

    abstract::This report describes a retarded girl with strabismus, high arched palate, antimongoloid slant, low set ears, hearing loss, micrognathia, short neck, and an anteriorly displaced anus. She was found to have a de novo partial trisomy of the proximal part of the long arm of chromosome 15. ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.25.4.260

    authors: Herweijer TJ,Oorthuys JW,Leschot NJ

    更新日期:1988-04-01 00:00:00

  • Can the diagnosis of NF1 be excluded clinically? A lack of pigmentary findings in families with spinal neurofibromatosis demonstrates a limitation of clinical diagnosis.

    abstract:BACKGROUND:Consensus clinical diagnostic criteria for neurofibromatosis type I (NF1) include café-au-lait macules and skinfold freckling. The former are frequently the earliest manifestation of NF1, and as such are of particular significance when assessing young children at risk of the condition. A phenotype of predomi...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2013-101648

    authors: Burkitt Wright EM,Sach E,Sharif S,Quarrell O,Carroll T,Whitehouse RW,Upadhyaya M,Huson SM,Evans DG

    更新日期:2013-09-01 00:00:00

  • Recessive osteogenesis imperfecta caused by LEPRE1 mutations: clinical documentation and identification of the splice form responsible for prolyl 3-hydroxylation.

    abstract:BACKGROUND:Recessive forms of osteogenesis imperfecta (OI) may be caused by mutations in LEPRE1, encoding prolyl 3-hydroxylase-1 (P3H1) or in CRTAP, encoding cartilage associated protein. These proteins constitute together with cyclophilin B (CyPB) the prolyl 3-hydroxylation complex that hydroxylates the Pro986 residue...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.2008.062729

    authors: Willaert A,Malfait F,Symoens S,Gevaert K,Kayserili H,Megarbane A,Mortier G,Leroy JG,Coucke PJ,De Paepe A

    更新日期:2009-04-01 00:00:00

  • Novel LMNA mutations cause an aggressive atypical neonatal progeria without progerin accumulation.

    abstract:BACKGROUND:Progeroid syndromes are genetic disorders that recapitulate some phenotypes of physiological ageing. Classical progerias, such as Hutchinson-Gilford progeria syndrome (HGPS), are generally caused by mutations in LMNA leading to accumulation of the toxic protein progerin and consequently, to nuclear envelope ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2015-103695

    authors: Soria-Valles C,Carrero D,Gabau E,Velasco G,Quesada V,Bárcena C,Moens M,Fieggen K,Möhrcken S,Owens M,Puente DA,Asensio Ó,Loeys B,Pérez A,Benoit V,Wuyts W,Lévy N,Hennekam RC,De Sandre-Giovannoli A,López-Otín C

    更新日期:2016-11-01 00:00:00

  • Predictive genetic testing in children and adults: a study of emotional impact.

    abstract:AIM:To determine whether, following predictive genetic testing for familial adenomatous polyposis (FAP), children or adults receiving positive results experience clinically significant levels of anxiety or depression, and whether children receiving positive results experience higher levels of anxiety or depression than...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.38.8.519

    authors: Michie S,Bobrow M,Marteau TM

    更新日期:2001-08-01 00:00:00

  • A new locus for autosomal dominant posterior polar cataract in Moroccan Jews maps to chromosome 14q22-23.

    abstract:BACKGROUND:Posterior polar cataract is a clinically distinctive opacity located at the back of the lens. It is commonly acquired in age related cataract, and may infrequently occur in pedigrees with congenital cataract. To date, five loci for autosomal dominant congenital posterior polar cataract have been identified. ...

    journal_title:Journal of medical genetics

    pub_type: 信件

    doi:10.1136/jmg.2005.034876

    authors: Pras E,Mahler O,Kumar V,Frydman M,Gefen N,Pras E,Hejtmancik JF

    更新日期:2006-10-01 00:00:00

  • Cardio-facio-cutaneous and Noonan syndromes due to mutations in the RAS/MAPK signalling pathway: genotype-phenotype relationships and overlap with Costello syndrome.

    abstract::Cardio-facio-cutaneous (CFC) syndrome, Noonan syndrome (NS), and Costello syndrome (CS) are clinically related developmental disorders that have been recently linked to mutations in the RAS/MEK/ERK signalling pathway. This study was a mutation analysis of the KRAS, BRAF, MEK1 and MEK2 genes in a total of 130 patients ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.2007.050450

    authors: Nava C,Hanna N,Michot C,Pereira S,Pouvreau N,Niihori T,Aoki Y,Matsubara Y,Arveiler B,Lacombe D,Pasmant E,Parfait B,Baumann C,Héron D,Sigaudy S,Toutain A,Rio M,Goldenberg A,Leheup B,Verloes A,Cavé H

    更新日期:2007-12-01 00:00:00

  • Consensus for genes to be included on cancer panel tests offered by UK genetics services: guidelines of the UK Cancer Genetics Group.

    abstract::Genetic testing for hereditary cancer predisposition has evolved rapidly in recent years with the discovery of new genes, but there is much debate over the clinical utility of testing genes for which there are currently limited data regarding the degree of associated cancer risk. To address the discrepancies that have...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2017-105188

    authors: Taylor A,Brady AF,Frayling IM,Hanson H,Tischkowitz M,Turnbull C,Side L,UK Cancer Genetics Group (UK-CGG).

    更新日期:2018-06-01 00:00:00

  • Familial congenital laryngeal abductor paralysis: different expression in a family with one male and three females affected.

    abstract::A brother and two sisters of remotely consanguineous parents had congenital laryngeal abductor paralysis and moderate mental retardation. In the two older sibs, mental deficiency could have resulted from birth asphyxia, but the youngest girl was already microcephalic at birth and had no apparent asphyxia. The mother, ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.27.11.715

    authors: Schinzel A,Hof E,Dangel P,Robinson W

    更新日期:1990-11-01 00:00:00

  • An X chromosome-wide association analysis identifies variants in GPR174 as a risk factor for Graves' disease.

    abstract:BACKGROUND:Graves' disease is a female preponderant autoimmune illness and the contribution of the X chromosome to its risk has long been appreciated. However, no X-linked susceptibility loci have been indentified from recent genome-wide association studies (GWAS). METHODS:We re-examined the X chromosome data from our...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2013-101595

    authors: Chu X,Shen M,Xie F,Miao XJ,Shou WH,Liu L,Yang PP,Bai YN,Zhang KY,Yang L,Hua Q,Liu WD,Dong Y,Wang HF,Shi JX,Wang Y,Song HD,Chen SJ,Chen Z,Huang W

    更新日期:2013-07-01 00:00:00

  • Genome-wide association study identifies new disease loci for isolated clubfoot.

    abstract:BACKGROUND:Clubfoot is a common congenital birth defect with complex inheritance patterns. Currently, the genetic and morphological basis of clubfoot is poorly understood. To identify genetic risk factors associated with clubfoot, we performed a genome-wide association study of common genetic variants. METHODS:The DNA...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmedgenet-2014-102303

    authors: Zhang TX,Haller G,Lin P,Alvarado DM,Hecht JT,Blanton SH,Stephens Richards B,Rice JP,Dobbs MB,Gurnett CA

    更新日期:2014-05-01 00:00:00

  • The phenotypic features of osteogenesis imperfecta resulting from a mutation of the carboxyl-terminal pro alpha 1 (I) propeptide that impairs the assembly of type I procollagen and formation of the extracellular matrix.

    abstract::The features of a baby with lethal perinatal osteogenesis imperfecta (OI-II), resulting from the substitution of tryptophan 94 by cysteine in the carboxyl-terminal propeptide of pro alpha 1 (I) chains of type I procollagen, were studied. The limbs and torso were of normal length, shape, and proportion. Similarly, all ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.33.11.965

    authors: Cole WG,Chow CW,Bateman JF,Sillence DO

    更新日期:1996-11-01 00:00:00

  • Identification of loss-of-function mutations of SLC35D1 in patients with Schneckenbecken dysplasia, but not with other severe spondylodysplastic dysplasias group diseases.

    abstract:BACKGROUND:Schneckenbecken dysplasia (SBD) is an autosomal recessive lethal skeletal dysplasia that is classified into the severe spondylodysplastic dysplasias (SSDD) group in the international nosology for skeletal dysplasias. The radiological hallmark of SBD is the snail-like configuration of the hypoplastic iliac bo...

    journal_title:Journal of medical genetics

    pub_type: 信件

    doi:10.1136/jmg.2008.065201

    authors: Furuichi T,Kayserili H,Hiraoka S,Nishimura G,Ohashi H,Alanay Y,Lerena JC,Aslanger AD,Koseki H,Cohn DH,Superti-Furga A,Unger S,Ikegawa S

    更新日期:2009-08-01 00:00:00

  • Constitutional mismatch repair deficiency syndrome: clinical description in a French cohort.

    abstract:BACKGROUND:Constitutional mismatch repair deficiency (CMMRD) syndrome is a childhood cancer predisposition syndrome involving biallelic germline mutations of MMR genes, poorly recognised by clinicians so far. METHODS:Retrospective review of all 31 patients with CMMRD diagnosed in French genetics laboratories in order ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1136/jmedgenet-2015-103299

    authors: Lavoine N,Colas C,Muleris M,Bodo S,Duval A,Entz-Werle N,Coulet F,Cabaret O,Andreiuolo F,Charpy C,Sebille G,Wang Q,Lejeune S,Buisine MP,Leroux D,Couillault G,Leverger G,Fricker JP,Guimbaud R,Mathieu-Dramard M,Jedra

    更新日期:2015-11-01 00:00:00

  • De novo HRAS and KRAS mutations in two siblings with short stature and neuro-cardio-facio-cutaneous features.

    abstract::Mutations in genes involved in Ras signalling cause Noonan syndrome and other disorders characterised by growth disturbances and variable neuro-cardio-facio-cutaneous features. We describe two sisters, 46 and 31 years old, who presented with dysmorphic features, hypotonia, feeding difficulties, retarded growth and psy...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.2007.049361

    authors: Søvik O,Schubbert S,Houge G,Steine SJ,Norgård G,Engelsen B,Njølstad PR,Shannon K,Molven A

    更新日期:2007-07-01 00:00:00

  • Retrospective natural history of thymidine kinase 2 deficiency.

    abstract:BACKGROUND:Thymine kinase 2 (TK2) is a mitochondrial matrix protein encoded in nuclear DNA and phosphorylates the pyrimidine nucleosides: thymidine and deoxycytidine. Autosomal recessive TK2 mutations cause a spectrum of disease from infantile onset to adult onset manifesting primarily as myopathy. OBJECTIVE:To perfor...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章,多中心研究

    doi:10.1136/jmedgenet-2017-105012

    authors: Garone C,Taylor RW,Nascimento A,Poulton J,Fratter C,Domínguez-González C,Evans JC,Loos M,Isohanni P,Suomalainen A,Ram D,Hughes MI,McFarland R,Barca E,Lopez Gomez C,Jayawant S,Thomas ND,Manzur AY,Kleinsteuber K,Marti

    更新日期:2018-08-01 00:00:00

  • Gene deletion in an Italian haemophilia B subject.

    abstract::DNA from 20 Italian haemophilia B patients was analysed by the Southern blotting technique and hybridisation to a factor IX cDNA probe. A large deletion of factor IX gene was detected in one patient with antibodies to the infused factor; the EcoRI pattern of the other 19 subjects examined was normal. ...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.22.4.305

    authors: Bernardi F,del Senno L,Barbieri R,Buzzoni D,Gambari R,Marchetti G,Conconi F,Panicucci F,Positano M,Pitruzzello S

    更新日期:1985-08-01 00:00:00

  • Episodic ataxia and hemiplegia caused by the 8993T->C mitochondrial DNA mutation.

    abstract::The m.8993T-->C MTATP6 mutation of mitochondrial DNA (mtDNA) usually causes mitochondrial disease in childhood, but was recently described in a family with adult onset ataxia and polyneuropathy. Cytochrome c oxidase muscle histochemistry, which is the standard clinical investigation for mitochondrial disease in adults...

    journal_title:Journal of medical genetics

    pub_type: 信件

    doi:10.1136/jmg.2007.052902

    authors: Craig K,Elliott HR,Keers SM,Lambert C,Pyle A,Graves TD,Woodward C,Sweeney MG,Davis MB,Hanna MG,Chinnery PF

    更新日期:2007-12-01 00:00:00

  • A 5' splice site mutation in fucosidosis.

    abstract::Fucosidosis is a rare, autosomal recessive, lysosomal storage disease, resulting from a deficiency of the enzyme alpha-fucosidase (EC 3.2.1.51). It is characterised clinically by progressive mental and motor deterioration, growth retardation, coarse facies, and often recurrent infections, but the course of the disease...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.30.3.218

    authors: Williamson M,Cragg H,Grant J,Kretz K,O'Brien J,Willems PJ,Young E,Winchester B

    更新日期:1993-03-01 00:00:00

  • Shifting genetic patterns in anencephaly and spina bifida.

    abstract::The long-term decline in the incidence of the neural tube malformations, anencephaly and spina bifida (ASB), ended in the mid-1950's in New York State. Since that time, the rate of these birth defects has remained between 1 and 1.5/1000 births. In this low incidence population, we tested the basic tenets which support...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.15.2.101

    authors: Janerich DT,Piper J

    更新日期:1978-04-01 00:00:00

  • BRCA1 and BRCA2 mutation analysis in 86 early onset breast/ovarian cancer patients.

    abstract::Eighty-six women fulfilling specific selection criteria were studied for germline mutations in two breast cancer susceptibility genes, BRCA1 and BRCA2, using the protein truncation test (PTT). Nine germline mutations were identified, six in BRCA1 and three in BRCA2. Of the six BRCA1 mutations, three have previously be...

    journal_title:Journal of medical genetics

    pub_type: 杂志文章

    doi:10.1136/jmg.34.12.990

    authors: Garvin AM,Attenhofer-Haner M,Scott RJ

    更新日期:1997-12-01 00:00:00