Phylogenetic taxonomy of the family Chlorobiaceae on the basis of 16S rRNA and fmo (Fenna-Matthews-Olson protein) gene sequences.

abstract：:A non-motile, rod-shaped, red-pigmented bacterium, designated strain BZ33r(T), was isolated from soil of an industrial site. Cells stained Gram-negative and were aerobic and psychrophilic, showing good growth at 1-20 °C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BZ33r(T) was related to ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang DC,Busse HJ,Liu HC,Zhou YG,Schinner F,Margesin R

更新日期：2011-04-01 00:00:00

abstract：:Similarities in phylogeny and metabolic properties between the type species of two monospecific genera of thermophilic anaerobic bacteria, Carboxydothermus hydrogenoformans and Thermoterrabacterium ferrireducens, and analysis of their recently available 16S rRNA gene sequences warranted clarification of their taxonomi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Slobodkin AI,Sokolova TG,Lysenko AM,Wiegel J

更新日期：2006-10-01 00:00:00

abstract：:Advances in DNA sequencing and the increasing number of sequences available in databases have greatly enhanced the bacterial identification process. Several species within the genus Mycobacterium cause serious human and animal diseases. In order to assess their relative positions in the evolutionary process, four gene...

journal_title：International journal of systematic and evolutionary microbiology

authors： Devulder G,de Montclos MP,Flandrois JP

更新日期：2005-01-01 00:00:00

abstract：:A novel mineral-weathering bacterium was isolated from weathered rock (potassic trachyte) surfaces collected from Nanjing (Jiangsu, PR China). Cells of strain JN246(T) were Gram-stain-negative, rod-shaped and non-motile. Strain JN246(T) was aerobic, catalase- and oxidase-positive, and grew optimally at 28 °C and pH 7....

journal_title：International journal of systematic and evolutionary microbiology

authors： Cheng C,Wang Q,He LY,Huang Z,Sheng XF

更新日期：2015-01-01 00:00:00

abstract：:Four Gram-positive, non-motile, non-spore-forming bacterial strains, LC4(T), LC6(T), LC10(T) and LC13(T), were isolated from a filtration substrate made from trass, a volcanic rock, and their taxonomic positions were investigated by a polyphasic taxonomic approach. The novel strains grew over a temperature range of 5-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ding L,Hirose T,Yokota A

更新日期：2009-04-01 00:00:00

abstract：:A Gram-stain-positive, endospore-forming, rod-shaped, motile and strictly aerobic strain, designated T3-209T, was isolated from sediment sampled at a water depth of 1206 m of the southern Okinawa Trough at station T1 (25.07° N, 122.58° E) near the Tangyin hydrothermal vent during an expedition on the R/V Kexue in May ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu Y,Yu M,Zhang XH

更新日期：2018-04-01 00:00:00

abstract：:A taxonomic study was carried out on strain F44-8(T), which was isolated from a crude-oil-degrading consortium, enriched from marine sediment of the Beibu Gulf, PR China. The 16S rRNA gene sequence of strain F44-8(T) showed highest similarities to those of Flavobacterium frigoris LMG 21922(T) (93.3 %), Flavobacterium ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Fu Y,Tang X,Lai Q,Zhang C,Zhong H,Li W,Liu Y,Chen L,Sun F,Shao Z

更新日期：2011-01-01 00:00:00

abstract：:A study was undertaken to determine the prevalence and diversity of species of the genus Arcobacter in pig and dairy cattle manure, which led to the identification of strains AF1440T, AF1430 and AF1581. Initially identified as Arcobacter butzleri based on colony morphology and initial PCR-confirmation tests, analyses ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Whiteduck-Léveillée K,Whiteduck-Léveillée J,Cloutier M,Tambong JT,Xu R,Topp E,Arts MT,Chao J,Adam Z,André Lévesque C,Lapen DR,Villemur R,Talbot G,Khan IUH

更新日期：2015-08-01 00:00:00

abstract：:A novel actinobacterium, designated strain NEAU-QY2T, was isolated from the leaves of Sonchus oleraceus L. specimen, collected from Wuchang, Heilongjiang Province, China. A polyphasic study was carried out to establish the taxonomic position of this strain. The organism formed single spores with rough surfaces on subs...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ma Z,Liu C,Fan J,He H,Li C,Li J,Zhao S,Xiang W,Wang X

更新日期：2015-12-01 00:00:00

abstract：:Strains of Gram-stain-negative, anaerobic, rod-shaped bacteria were isolated from chinchilla (Chinchilla lanigera) faeces, and strain ST166(T) was investigated taxonomically. Phylogenetic analyses of 16S rRNA gene sequences revealed that strain ST166(T) belonged to the genus Parabacteroides. Strain ST166(T) formed a d...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kitahara M,Sakamoto M,Tsuchida S,Kawasumi K,Amao H,Benno Y,Ohkuma M

更新日期：2013-09-01 00:00:00

abstract：:A mesophilic anaerobic bacterium, designated KHALHBd91T was isolated from the moderately hot spring of Hammam Biadha, Tunisia. The strain was Gram-staining-negative, non-sporulating, non-motile and rod-shaped, appearing singly (0.5-2.0×0.5-1 µm). It grew anaerobically at temperatures between 20 and 50 °C (optimum 37 °...

journal_title：International journal of systematic and evolutionary microbiology

authors： Fadhlaoui K,Ben Hania W,Postec A,Hamdi M,Ollivier B,Fardeau ML

更新日期：2016-11-01 00:00:00

abstract：:A novel, strictly aerobic, Gram-negative, yellow-orange-pigmented, motile, catalase-positive, oxidase-negative bacterium, RW262(T), was isolated from water of the River Taff, Cardiff, UK, during January 2000. Phylogenetic analysis of the 16S rRNA gene indicated that strain RW262(T) was a member of the family Cryomorph...

journal_title：International journal of systematic and evolutionary microbiology

authors： O'Sullivan LA,Rinna J,Humphreys G,Weightman AJ,Fry JC

更新日期：2005-09-01 00:00:00

abstract：:Following phylogenetic analysis based on 16S rRNA gene sequences, together with DNA G+C contents and differential chemotaxonomic and physiological characteristics, a new genus with the name Aliiglaciecola gen. nov. is proposed to more appropriately accommodate two recognized species of the genera Glaciecola and Aestua...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jean WD,Hsu CY,Huang SP,Chen JS,Lin S,Su MH,Shieh WY

更新日期：2013-08-01 00:00:00

abstract：:Genetic diversity in tropical rhizobial species is still poorly known. With the aim of increasing this knowledge, three ribosomal regions of 119 strains belonging to the official Brazilian culture collection of rhizobia and classified as Bradyrhizobium based on morphological and physiological characteristics in vitro ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Germano MG,Menna P,Mostasso FL,Hungria M

更新日期：2006-01-01 00:00:00

abstract：:A Gram-reaction-positive, rod-shaped, non-motile, non-spore-forming bacterium (strain BX5-10(T)) was isolated from the soil of a ginseng field on Baekdu Mountain in Jilin district, China. The taxonomic position of this bacterium was determined in an investigation based on a polyphasic approach. On the basis of 16S rRN...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SH,Liu QM,Lee ST,Kim SC,Im WT

更新日期：2012-03-01 00:00:00

abstract：:A bacterial strain, B5-2T, was isolated from an ice core drilled from Muztagh Glacier, China. Strain B5-2T was a Gram-stain-negative, short rod-shaped, motile by polar flagella, aerobic bacterium. The major fatty acids of strain B5-2T were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c) and iso-C13 : 0. The G+C conten...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo B,Liu Y,Gu Z,Shen L,Liu K,Xing T,Wang N,Liu H,Zhou Y,Li J

更新日期：2017-02-01 00:00:00

abstract：:Two novel facultatively anaerobic bacterial strains, BL-34(T) and BL-35, isolated from groundwater contaminated by a mixture of chlorosolvents were characterized using a polyphasic approach. The two strains exhibited essentially identical taxonomic features except for a vitamin B(12) requirement by strain BL-35 for op...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bae HS,Moe WM,Yan J,Tiago I,da Costa MS,Rainey FA

更新日期：2006-08-01 00:00:00

abstract：:A Gram-negative bacterium, designated strain EMB71(T), was isolated from activated sludge used for enhanced biological phosphorus removal in a sequencing batch reactor. The cells of the isolate were facultatively aerobic, motile rods with single polar flagella. Growth was observed to occur at 15-35 degrees C (optimall...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chung BS,Ryu SH,Park M,Jeon Y,Chung YR,Jeon CO

更新日期：2007-05-01 00:00:00

abstract：:A strictly aerobic, halotolerant, Gram-stain-negative, rod-shaped bacterium, designated strain DG1253(T), was isolated from a laboratory culture of the marine dinoflagellate Lingulodinium polyedrum (CCAP 1121/2). The strain was able to degrade two- and three-ring polycyclic aromatic hydrocarbons. It exhibited a narrow...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gutierrez T,Green DH,Whitman WB,Nichols PD,Semple KT,Aitken MD

更新日期：2012-11-01 00:00:00

abstract：:Strain CCUG 50899, a Gram-negative, rod-shaped, non-spore-forming, motile bacterium isolated from industrial environment in Sweden and tentatively assigned to the species Ochrobactrum anthropi, was studied in order to clarify its taxonomic status. 16S rRNA gene sequence similarities placed the strain in the genus Ochr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Huber B,Scholz HC,Kämpfer P,Falsen E,Langer S,Busse HJ

更新日期：2010-02-01 00:00:00

abstract：:A recent taxonomic study confirmed the synonymy of Rhodococcus equi (Magnusson 1923) Goodfellow and Alderson 1977 and Corynebacterium hoagii (Morse 1912) Eberson 1918. As a result, both R. equi and C. hoagii were reclassified as Rhodococcus hoagii comb. nov. in application of the principle of priority of the Prokaryot...

journal_title：International journal of systematic and evolutionary microbiology

authors： Vázquez-Boland JA,Scortti M,Meijer WG

更新日期：2020-05-01 00:00:00

abstract：:Two unusual, Gram-negative, catalase- and oxidase-positive rods, designated C2(T) and C5, were isolated from compost samples. Comparative 16S rRNA gene sequencing studies demonstrated that both isolates were members of the genus Pseudomonas and belonged to the Pseudomonas aeruginosa group. Strain C2(T) was most closel...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gibello A,Vela AI,Martín M,Mengs G,Alonso PZ,Garbi C,Fernández-Garayzábal JF

更新日期：2011-12-01 00:00:00

abstract：:Yersinia kristensenii consists of phenotypically heterogeneous strains. This is reflected by the existence of strains with various multilocus enzyme electrophoresis and 16S rRNA gene sequence types. Strains originally phenotyped as members of Y. kristensenii were studied using 16S rRNA gene sequencing, DNA-DNA hybridi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sprague LD,Neubauer H

更新日期：2005-03-01 00:00:00

abstract：:A thermophilic actinomycete, strain LA5(T), was isolated from a hot spring in Yunnan province, People's Republic of China. The isolate grew aerobically at temperatures of 50-75 degrees C. Aerobic mycelia were not observed. Single spores were produced along the substrate hypha. Strain LA5(T) was characterized chemotaxo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang YX,Dong C,Biao S

更新日期：2007-08-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, non-motile, rod-shaped bacterial strain, THG-A18(T), was isolated from soil of Gwangju province in South Korea. Strain THG-A18(T) grew optimally at 25-30 °C, at pH 7.0-8.0 and in the absence of NaCl. Strain THG-A18(T) displayed β-glucosidase activity, which enabled it to conver...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park YJ,Son HM,Lee EH,Kim JH,Mavlonov GT,Choi KJ,Shin HS,Kook M,Yi TH

更新日期：2013-12-01 00:00:00

abstract：:A novel chemolithoautotrophic and hyperthermophilic member of the genus Ignicoccus was isolated from a submarine hydrothermal system at the Kolbeinsey Ridge, to the north of Iceland. The new isolate showed high similarity to the two species described to date, Ignicoccus islandicus and Ignicoccus pacificus, in its phys...

journal_title：International journal of systematic and evolutionary microbiology

authors： Paper W,Jahn U,Hohn MJ,Kronner M,Näther DJ,Burghardt T,Rachel R,Stetter KO,Huber H

更新日期：2007-04-01 00:00:00

abstract：:Analysis of 16S rRNA gene sequences has been the method generally used to study the evolution and phylogeny of bacteria. Phylogenetic analysis of the 16S rRNA gene has shown the position of the genus Helicobacter in the epsilon-subclass of the Proteobacteria. Because 16S rRNA-based phylogeny does not always correspond...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mikkonen TP,Kärenlampi RI,Hänninen ML

更新日期：2004-05-01 00:00:00

abstract：:This listing of names published in a previous issue of the IJSEM is provided as a service to bacteriology to assist in the recognition of new names and new combinations. This procedure was proposed by the Judicial Commission [Minute 11(ii), Int J Syst Bacteriol 41 (1991), p. 185]. The names given herein are listed acc...

journal_title：International journal of systematic and evolutionary microbiology

authors：

更新日期：2004-09-01 00:00:00

abstract：:A novel Gram-stain-negative, flagellated, rod-shaped, yellow-pigmented aerobic bacterium, strain SA925T, that is capable of degrading 1-methylphenanthrene was isolated from oil-polluted soil collected from a refinery located in Guangzhou, China. Phylogenetic analysis based on the 16S rRNA gene sequence demonstrated th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sha S,Zhong J,Chen B,Lin L,Luan T

更新日期：2017-02-01 00:00:00

abstract：:A Gram-stain-negative, non-spore-forming, aerobic, motile, ovoid or short rod shaped bacterium, designed strain B17T, was isolated from the culture broth of Picochlorum sp. 122. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain B17T forms a stable cluster with Oceanicolagranulosus MCCC 1A105...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang G,Xu S,Su H,Chen B,Liang J,Huang W,Wang Y,Yu K

更新日期：2019-02-01 00:00:00