Identification and characterization of a novel gene Saf transcribed from the opposite strand of Fas.

Abstract:

:Apoptosis is a morphologically distinct form of cell death involved in many physiological and pathological processes. The regulation of Fas/Apo-1 involved in membrane-mediated apoptosis has also been known to play crucial roles in many systems. More and more naturally occurring antisense RNAs are now known to regulate, at least in part, a growing number of eukaryotic genes. In this report, we describe the findings of a novel RNA transcribed from the opposite strand of the intron 1 of the human Fas gene. Using orientation-specific RT-PCR and northern blot analysis, we show that this transcript is 1.5 kb in length and was expressed in several human tissues and cell lines. This transcript was cloned by 5'- and 3'-RACE (rapid amplification of cDNA ends) and the transcription start site was determined by primer extension. This novel gene was named Saf. To assess the functions of Saf, Jurkat cells transfected with human Saf or control vector was prepared. The stable Saf-transfectant was highly resistant to Fas-mediated but not to TNF-alpha-mediated apoptosis. Although the overall mRNA expression level of Fas was not affected, expression of some novel forms of Fas transcripts was increased in Saf-transfectant, especially the inhibitory soluble forms. These findings collectively suggest that Saf might protect T lymphocytes from Fas-mediated apoptosis by blocking the binding of FasL or its agonistic Fas antibody. Saf might regulate the expression of Fas alternative splice forms through pre-mRNA processing.

journal_name

Hum Mol Genet

journal_title

Human molecular genetics

authors

Yan MD,Hong CC,Lai GM,Cheng AL,Lin YW,Chuang SE

doi

10.1093/hmg/ddi156

subject

Has Abstract

pub_date

2005-06-01 00:00:00

pages

1465-74

issue

11

eissn

0964-6906

issn

1460-2083

pii

ddi156

journal_volume

14

pub_type

杂志文章
  • The transcriptional factor LBP-1c/CP2/LSF gene on chromosome 12 is a genetic determinant of Alzheimer's disease.

    abstract::Although the varepsilon4 allele of the apolipoprotein E gene appears as an important biological marker for Alzheimer's disease (AD) susceptibility, other genetic determinants are clearly implicated in the AD process. Here, we propose that a genetic variation in the transcriptional factor LBP-1c/CP2/LSF gene, located c...

    journal_title:Human molecular genetics

    pub_type: 杂志文章,多中心研究

    doi:10.1093/oxfordjournals.hmg.a018918

    authors: Lambert JC,Goumidi L,Vrièze FW,Frigard B,Harris JM,Cummings A,Coates J,Pasquier F,Cottel D,Gaillac M,St Clair D,Mann DM,Hardy J,Lendon CL,Amouyel P,Chartier-Harlin MC

    更新日期:2000-09-22 00:00:00

  • Distal axonopathy in an alsin-deficient mouse model.

    abstract::Mutations in Alsin are associated with chronic juvenile amyotrophic lateral sclerosis (ALS2), juvenile primary lateral sclerosis and infantile-onset ascending spastic paralysis. The primary pathology and pathogenic mechanism of the disease remain largely unknown. Here we show that alsin-deficient mice have motor impai...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddm251

    authors: Deng HX,Zhai H,Fu R,Shi Y,Gorrie GH,Yang Y,Liu E,Dal Canto MC,Mugnaini E,Siddique T

    更新日期:2007-12-01 00:00:00

  • Fragile sites and human disease.

    abstract::A relationship between fragile sites, specific genomic regions visible as gaps or breaks on cultivated chromosomes, and human disease has been proposed many years ago. Evidence for a role of the ubiquitously expressed common fragile sites characterized by peculiar genome architecture in cancer has been accumulated ove...

    journal_title:Human molecular genetics

    pub_type: 杂志文章,评审

    doi:10.1093/hmg/ddm136

    authors: Debacker K,Kooy RF

    更新日期:2007-10-15 00:00:00

  • Filamin B mutations cause chondrocyte defects in skeletal development.

    abstract::Filamin B (FLNB) is a cytoplasmic protein that regulates the cytoskeletal network by cross-linking actin, linking cell membrane to the cytoskeleton and regulating intracellular signaling pathways responsible for skeletal development (Stossel, T.P., Condeelis, J., Cooley, L., Hartwig, J.H., Noegel, A., Schleicher, M. a...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddm114

    authors: Lu J,Lian G,Lenkinski R,De Grand A,Vaid RR,Bryce T,Stasenko M,Boskey A,Walsh C,Sheen V

    更新日期:2007-07-15 00:00:00

  • Complete loss-of-function of the heart/muscle-specific adenine nucleotide translocator is associated with mitochondrial myopathy and cardiomyopathy.

    abstract::Multiple mitochondrial DNA deletions are associated with clinically heterogeneous disorders transmitted as mendelian traits. Dominant missense mutations were found in the gene encoding the heart and skeletal muscle-specific isoform of the adenine nucleotide translocator (ANT1) in families with autosomal dominant progr...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddi341

    authors: Palmieri L,Alberio S,Pisano I,Lodi T,Meznaric-Petrusa M,Zidar J,Santoro A,Scarcia P,Fontanesi F,Lamantea E,Ferrero I,Zeviani M

    更新日期:2005-10-15 00:00:00

  • The apical ectodermal ridge of the mouse model of ectrodactyly Dlx5;Dlx6-/- shows altered stratification and cell polarity, which are restored by exogenous Wnt5a ligand.

    abstract::The congenital malformation split hand/foot (SHFM) is characterized by missing central fingers and dysmorphology or fusion of the remaining ones. Type-1 SHFM is linked to deletions/rearrangements of the DLX5-DLX6 locus and point mutations in the DLX5 gene. The ectrodactyly phenotype is reproduced in mice by the double...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddv514

    authors: Conte D,Garaffo G,Lo Iacono N,Mantero S,Piccolo S,Cordenonsi M,Perez-Morga D,Orecchia V,Poli V,Merlo GR

    更新日期:2016-02-15 00:00:00

  • Translational readthrough by the aminoglycoside geneticin (G418) modulates SMN stability in vitro and improves motor function in SMA mice in vivo.

    abstract::Proximal spinal muscular atrophy (SMA) is a neuromuscular disorder for which there is no available therapy. SMA is caused by loss or mutation of the survival motor neuron 1 gene, SMN1, with retention of a nearly identical copy gene, SMN2. In contrast to SMN1, most SMN2 transcripts lack exon 7. This alternatively splic...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddp030

    authors: Heier CR,DiDonato CJ

    更新日期:2009-04-01 00:00:00

  • Disrupted-in-Schizophrenia-1 (Disc1) is necessary for migration of the pyramidal neurons during mouse hippocampal development.

    abstract::The hippocampus has a highly ordered structure and is composed of distinct layers. Neuronal migration is an essential part of the process of the layer formation because neurons are primarily generated near the ventricle and must migrate to arrive at their final locations during brain development. Impairment of brain d...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddr194

    authors: Tomita K,Kubo K,Ishii K,Nakajima K

    更新日期:2011-07-15 00:00:00

  • A variant in MRPS14 (uS14m) causes perinatal hypertrophic cardiomyopathy with neonatal lactic acidosis, growth retardation, dysmorphic features and neurological involvement.

    abstract::Dysfunction of mitochondrial translation is an increasingly important molecular cause of human disease, but structural defects of mitochondrial ribosomal subunits are rare. We used next-generation sequencing to identify a homozygous variant in the mitochondrial small ribosomal protein 14 (MRPS14, uS14m) in a patient m...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddy374

    authors: Jackson CB,Huemer M,Bolognini R,Martin F,Szinnai G,Donner BC,Richter U,Battersby BJ,Nuoffer JM,Suomalainen A,Schaller A

    更新日期:2019-02-15 00:00:00

  • miR-132/212 deficiency impairs tau metabolism and promotes pathological aggregation in vivo.

    abstract::Alzheimer's disease (AD) and related tauopathies comprise a large group of neurodegenerative diseases associated with the pathological aggregation of tau protein. While much effort has focused on understanding the function of tau, little is known about the endogenous mechanisms regulating tau metabolism in vivo and ho...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddv377

    authors: Smith PY,Hernandez-Rapp J,Jolivette F,Lecours C,Bisht K,Goupil C,Dorval V,Parsi S,Morin F,Planel E,Bennett DA,Fernandez-Gomez FJ,Sergeant N,Buée L,Tremblay MÈ,Calon F,Hébert SS

    更新日期:2015-12-01 00:00:00

  • A YAC clone map spanning 7.5 megabases of human chromosome band Xq28.

    abstract::Xq28 has been of special interest in human genetics because a large number of diseases map to this region. As a step in the molecular analysis of the as yet uncloned disease genes, and as a test for the detailed analysis of larger regions of the genome, we have constructed YAC clone contigs covering the 7.5 Mb region ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/3.12.2137

    authors: Rogner UC,Kioschis P,Wilke K,Gong W,Pick E,Dietrich A,Zechner U,Hameister H,Pragliola A,Herman GE

    更新日期:1994-12-01 00:00:00

  • Genetic and epigenetic mechanisms combine to control MMP1 expression and its association with preterm premature rupture of membranes.

    abstract::Degradation of fibrillar collagens is believed to be involved in the rupture of the fetal membranes during normal parturition and when the membranes rupture prematurely. Matrix metalloproteinase 1 (MMP1) is a key enzyme involved in extracellular matrix turnover, and genetic variation in the MMP1 promoter is associated...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddm381

    authors: Wang H,Ogawa M,Wood JR,Bartolomei MS,Sammel MD,Kusanovic JP,Walsh SW,Romero R,Strauss JF 3rd

    更新日期:2008-04-15 00:00:00

  • The sarcoglycan complex in the six autosomal recessive limb-girdle muscular dystrophies.

    abstract::To enhance our understanding of the autosomal recessive limb-girdle muscular dystrophy (LGMD), patients from six genetically distinct forms (LGMD2A to LGMD2F) were studied with antibodies directed against four sarcoglycan subunits (alpha-, beta-, gamma-, delta-SG), dystrophin, beta-dystroglycan (beta-DG) and merosin. ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/5.12.1963

    authors: Vainzof M,Passos-Bueno MR,Canovas M,Moreira ES,Pavanello RC,Marie SK,Anderson LV,Bonnemann CG,McNally EM,Nigro V,Kunkel LM,Zatz M

    更新日期:1996-12-01 00:00:00

  • Genetic and cellular defects contributing to benign tumor formation in neurofibromatosis type 1.

    abstract::Neurofibromatosis type 1 (NF1) is a common inherited cancer predisposition syndrome. The NF1 gene product, neurofibromin, is hypothesized to function as a tumor suppressor and nearly all NF1 patients develop benign peripheral nerve tumors. These neurofibromas presumably arise from NF1 inactivation in S100(+)Schwann ce...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/9.7.1059

    authors: Rutkowski JL,Wu K,Gutmann DH,Boyer PJ,Legius E

    更新日期:2000-04-12 00:00:00

  • Allelic imbalance in BRCA1 and BRCA2 gene expression is associated with an increased breast cancer risk.

    abstract::The contribution of BRCA1 and BRCA2 to familial and non-familial forms of breast cancer has been difficult to accurately estimate because of the myriad of potential genetic and epigenetic mechanisms that can ultimately influence their expression and involvement in cellular activities. As one of these potential mechani...

    journal_title:Human molecular genetics

    pub_type: 临床试验,杂志文章

    doi:10.1093/hmg/ddn022

    authors: Chen X,Weaver J,Bove BA,Vanderveer LA,Weil SC,Miron A,Daly MB,Godwin AK

    更新日期:2008-05-01 00:00:00

  • Point mutations at the carboxy terminus of the human dystrophin gene: implications for an association with mental retardation in DMD patients.

    abstract::Duchenne and Becker muscular dystrophies (DMD/BMD) are caused by mutations in the human dystrophin gene. About two-thirds of DMD/BMD patients exhibit gross rearrangements in the gene whereas the mutations in the remaining one third are thought to be point mutations or minor structural lesions. By means of various prog...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/2.11.1877

    authors: Lenk U,Hanke R,Thiele H,Speer A

    更新日期:1993-11-01 00:00:00

  • The heritability and patterns of DNA methylation in normal human colorectum.

    abstract::DNA methylation (DNAm) has been linked to changes in chromatin structure, gene expression and disease. The DNAm level can be affected by genetic variation; although, how this differs by CpG dinucleotide density and genic location of the DNAm site is not well understood. Moreover, the effect of disease causing variants...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddw072

    authors: Rowlatt A,Hernández-Suárez G,Sanabria-Salas MC,Serrano-López M,Rawlik K,Hernandez-Illan E,Alenda C,Castillejo A,Soto JL,Haley CS,Tenesa A

    更新日期:2016-06-15 00:00:00

  • Fibulin-5 mutations: mechanisms of impaired elastic fiber formation in recessive cutis laxa.

    abstract::To elucidate the molecular mechanisms of impaired elastic fiber formation in recessive cutis laxa, we have investigated two disease-causing missense substitutions in fibulin-5, C217R and S227P. Pulse-chase immunoprecipitation experiments indicated that S227P mutant fibulin-5 was synthesized and secreted by skin fibrob...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddl414

    authors: Hu Q,Loeys BL,Coucke PJ,De Paepe A,Mecham RP,Choi J,Davis EC,Urban Z

    更新日期:2006-12-01 00:00:00

  • Inactivation of the mouse Magel2 gene results in growth abnormalities similar to Prader-Willi syndrome.

    abstract::Prader-Willi syndrome (PWS) is an imprinted genetic obesity disorder characterized by abnormalities of growth and metabolism. Multiple mouse models with deficiency of one or more PWS candidate genes have partially correlated individual genes with aspects of the PWS phenotype, although the genetic origin of defects in ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddm225

    authors: Bischof JM,Stewart CL,Wevrick R

    更新日期:2007-11-15 00:00:00

  • Construction of a YAC contig and a STS map spanning at least seven megabasepairs in chromosome 5q34-35.

    abstract::We have constructed a YAC contig containing 54 clones and a minimum of 7 Mbp of human DNA, that maps to bands q34-35 on chromosome 5. The contig was nucleated using FISH mapped cosmid clones shown to flank the t(2;5)(p23;q35) translocation breakpoint in a CD30-positive large cell lymphoma cell line. Thirty of the 54 Y...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/3.1.99

    authors: Lu-Kuo JM,Le Paslier D,Weissenbach J,Chumakov I,Cohen D,Ward DC

    更新日期:1994-01-01 00:00:00

  • A histone deacetylase inhibitor improves hypothyroidism caused by a TRα1 mutant.

    abstract::Mutations of the thyroid hormone receptor α gene (THRA) cause hypothyroidism in patients with growth and developmental retardation, and skeletal dysplasia. Genetic evidence indicates that the dominant negative activity of TRα1 mutants underlies pathological manifestations. Using a mouse model of hypothyroidism caused ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddt660

    authors: Kim DW,Park JW,Willingham MC,Cheng SY

    更新日期:2014-05-15 00:00:00

  • Neuregulin 1 type III improves peripheral nerve myelination in a mouse model of congenital hypomyelinating neuropathy.

    abstract::Myelin sheath thickness is precisely regulated and essential for rapid propagation of action potentials along myelinated axons. In the peripheral nervous system, extrinsic signals from the axonal protein neuregulin 1 (NRG1) type III regulate Schwann cell fate and myelination. Here we ask if modulating NRG1 type III le...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddy420

    authors: Belin S,Ornaghi F,Shackleford G,Wang J,Scapin C,Lopez-Anido C,Silvestri N,Robertson N,Williamson C,Ishii A,Taveggia C,Svaren J,Bansal R,Schwab MH,Nave K,Fratta P,D'Antonio M,Poitelon Y,Feltri ML,Wrabetz L

    更新日期:2019-04-15 00:00:00

  • Functionally oriented analysis of cardiometabolic traits in a trans-ethnic sample.

    abstract::Interpretation of genetic association results is difficult because signals often lack biological context. To generate hypotheses of the functional genetic etiology of complex cardiometabolic traits, we estimated the genetically determined component of gene expression from common variants using PrediXcan (1) and determ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddy435

    authors: Petty LE,Highland HM,Gamazon ER,Hu H,Karhade M,Chen HH,de Vries PS,Grove ML,Aguilar D,Bell GI,Huff CD,Hanis CL,Doddapaneni H,Munzy DM,Gibbs RA,Ma J,Parra EJ,Cruz M,Valladares-Salgado A,Arking DE,Barbeira A,Im HK

    更新日期:2019-04-01 00:00:00

  • Homozygous alpha6 integrin mutation in junctional epidermolysis bullosa with congenital duodenal atresia.

    abstract::Junctional epidermolysis bullosa with congenital pyloric or duodenal atresia is a distinct variant within this group of autosomal recessive blistering skin diseases. In this study we demonstrate, for the first time, a homozygous mutation in the alpha6 integrin gene (ITGA6) in a family with three affected individuals. ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/6.5.669

    authors: Pulkkinen L,Kimonis VE,Xu Y,Spanou EN,McLean WH,Uitto J

    更新日期:1997-05-01 00:00:00

  • Loss of p300 and CBP disrupts histone acetylation at the mouse Sry promoter and causes XY gonadal sex reversal.

    abstract::CREB-binding protein (CBP, CREBBP, KAT3A) and its closely related paralogue p300 (EP300, KAT3B), together termed p300/CBP, are histone/lysine acetyl-transferases that control gene expression by modifying chromatin-associated proteins. Here, we report roles for both of these chromatin-modifying enzymes in mouse sex det...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddx398

    authors: Carré GA,Siggers P,Xipolita M,Brindle P,Lutz B,Wells S,Greenfield A

    更新日期:2018-01-01 00:00:00

  • Novel mutations in lysosomal neuraminidase identify functional domains and determine clinical severity in sialidosis.

    abstract::Lysosomal neuraminidase is the key enzyme for the intralysosomal catabolism of sialylated glycoconjugates and is deficient in two neurodegenerative lysosomal disorders, sialidosis and galactosialidosis. Here we report the identification of eight novel mutations in the neuraminidase gene of 11 sialidosis patients with ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/9.18.2715

    authors: Bonten EJ,Arts WF,Beck M,Covanis A,Donati MA,Parini R,Zammarchi E,d'Azzo A

    更新日期:2000-11-01 00:00:00

  • Common variation at 2q22.3 (ZEB2) influences the risk of renal cancer.

    abstract::Genome-wide association studies (GWASs) of renal cell cancer (RCC) have identified four susceptibility loci thus far. To identify an additional RCC common susceptibility locus, we conducted a GWAS and performed a meta-analysis with published GWASs (totalling 2215 cases and 8566 controls of European background) and fol...

    journal_title:Human molecular genetics

    pub_type: 杂志文章,meta分析

    doi:10.1093/hmg/dds489

    authors: Henrion M,Frampton M,Scelo G,Purdue M,Ye Y,Broderick P,Ritchie A,Kaplan R,Meade A,McKay J,Johansson M,Lathrop M,Larkin J,Rothman N,Wang Z,Chow WH,Stevens VL,Ryan Diver W,Gapstur SM,Albanes D,Virtamo J,Wu X,Bre

    更新日期:2013-02-15 00:00:00

  • A genetic risk factor for mouse neural tube defects: defining the embryonic basis.

    abstract::Genetic polymorphisms are thought to play an important role in determining susceptibility to neural tube defects (NTDs), for example between different ethnic groups, but the embryonic manifestation of these polymorphic genetic influences is unclear. We have used a mouse model to test experimentally whether polymorphic...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/9.4.575

    authors: Fleming A,Copp AJ

    更新日期:2000-03-01 00:00:00

  • Identification of Btk mutations in 20 unrelated patients with X-linked agammaglobulinaemia (XLA).

    abstract::X-linked agammaglobulinaemia (XLA) is an inherited immunodeficiency resulting from mutations in the gene for a cytoplasmic protein tyrosine kinase (Btk). We have utilised reverse-transcription-based PCR in combination with the chemical cleavage and mismatch technique (CCM) to screen for Btk mutations in 42 unrelated p...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/4.4.693

    authors: Jin H,Webster AD,Vihinen M,Sideras P,Vorechovsky I,Hammarstróm L,Bernatowska-Matuszkiewicz E,Smith CI,Bobrow M,Vetrie D

    更新日期:1995-04-01 00:00:00

  • Cellular interference in craniofrontonasal syndrome: males mosaic for mutations in the X-linked EFNB1 gene are more severely affected than true hemizygotes.

    abstract::Craniofrontonasal syndrome (CFNS), an X-linked disorder caused by loss-of-function mutations of EFNB1, exhibits a paradoxical sex reversal in phenotypic severity: females characteristically have frontonasal dysplasia, craniosynostosis and additional minor malformations, but males are usually more mildly affected with ...

    journal_title:Human molecular genetics

    pub_type: 杂志文章

    doi:10.1093/hmg/ddt015

    authors: Twigg SR,Babbs C,van den Elzen ME,Goriely A,Taylor S,McGowan SJ,Giannoulatou E,Lonie L,Ragoussis J,Sadighi Akha E,Knight SJ,Zechi-Ceide RM,Hoogeboom JA,Pober BR,Toriello HV,Wall SA,Rita Passos-Bueno M,Brunner HG,Mathi

    更新日期:2013-04-15 00:00:00