De novo copy number variants and parental age: Is there an association?

Abstract:

PURPOSE:To investigate whether increased parental age is associated with an increased risk for de novo copy number variant (CNV) formation in offspring. METHODS:CNV calls from 2323 individuals referred to Signature Genomic Laboratories for clinical microarray-based comparative genomic hybridization were investigated; 17% of the samples were prenatal and 83% were postnatal. The de novo CNV data were further split into de novo CNVs bound by low copy repeats (LCRs) and those not bound by LCRs. RESULTS:No association was found between CNV occurrence and paternal age in both the prenatal (p = 0.6795) and postnatal (p = 0.1741) cohorts. Maternal age was significantly higher with de novo CNV occurrence in our postnatal cohort (p = 0.0126), an effect which may be driven by formation of de novo CNVs that are bound by LCRs (p = 0.0026). Furthermore, a significant positive correlation was observed between maternal age and de novo CNVs (Point-Biserial R2 = 0.0503, p = 0.0152). CONCLUSIONS:This large-scale study did not find any evidence for the influence of increased paternal age on de novo CNV formation, while increased maternal age appeared to increase risk for de novo, non-complex CNV occurrence in offspring with intellectual disability/developmental delay. Further studies and continued technological advances will help yield more information on the risk factors for de novo CNVs.

journal_name

Eur J Med Genet

authors

Wadhawan I,Hai Y,Foyouzi Yousefi N,Guo X,Graham JM Jr,Rosenfeld JA

doi

10.1016/j.ejmg.2019.103829

subject

Has Abstract

pub_date

2020-04-01 00:00:00

pages

103829

issue

4

eissn

1769-7212

issn

1878-0849

pii

S1769-7212(18)30701-8

journal_volume

63

pub_type

杂志文章
  • A compound heterozygosity of Tecrl gene confirmed in a catecholaminergic polymorphic ventricular tachycardia family.

    abstract::Catecholaminergic polymorphic ventricular tachycardia (CPVT) is one of the most common causes of sudden cardiac death (SCD) during childhood and in adolescence. Trans-2, 3-enoyl-CoA reductase-like (Tecrl) gene mutations (Arg196Gln and c.331+1G > A splice site mutation) were first reported in CPVT. Tecrl homozygous c.3...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2019.01.018

    authors: Xie L,Hou C,Jiang X,Zhao J,Li Y,Xiao T

    更新日期:2019-07-01 00:00:00

  • Neuroblastoma Amplified Sequence (NBAS) mutation in recurrent acute liver failure: Confirmatory report in a sibship with very early onset, osteoporosis and developmental delay.

    abstract:BACKGROUND:Recently, biallelic mutations in the Neuroblastoma Amplified Sequence NBAS gene have been identified in ten patients that present recurrent acute liver failure (RALF) in early infancy. In addition to severe liver dysfunction, some of these individuals also suffered from other comorbidities including cardiomy...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2015.11.005

    authors: Capo-Chichi JM,Mehawej C,Delague V,Caillaud C,Khneisser I,Hamdan FF,Michaud JL,Kibar Z,Mégarbané A

    更新日期:2015-12-01 00:00:00

  • Genetic polymorphisms in the DNA repair gene, XRCC1 associate with non-Hodgkin lymphoma susceptibility: A systematic review and meta-analysis.

    abstract::A DNA repair protein, X-ray repair cross-complementing group 1 (XRCC1), has been implicated in the development of multiple cancers, including non-Hodgkin lymphoma (NHL). Recent studies evaluating the association between XRCC1 polymorphisms and NHL risk have been published. However, the published studies are controvers...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,meta分析,评审

    doi:10.1016/j.ejmg.2015.12.011

    authors: Li Y,Bai O,Cui J,Li W

    更新日期:2016-02-01 00:00:00

  • Two siblings with a novel nonsense variant provide further delineation of the spectrum of recessive KLHL7 diseases.

    abstract::Mutations in Kelch-like family member 7 (KLHL7) have recently been described as a cause of a constellation of clinical findings with descriptions of both a Crisponi syndrome (CS)/cold-induced sweating syndrome type 1 (CISS1)-like, as well as a Bohring-Opitz syndrome (BOS)-like presentation. Here we report two siblings...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2018.10.003

    authors: Jeffries L,Olivieri JE,Ji W,Spencer-Manzon M,Bale A,Konstantino M,Lakhani SA

    更新日期:2019-09-01 00:00:00

  • A further contribution to the delineation of the 17q21.31 microdeletion syndrome: central nervous involvement in two Italian patients.

    abstract::The 17q21.31 microdeletion syndrome is a genetic disorder characterized by intellectual disability, facial dysmorphisms and a typical behavioral phenotype. Patients are usually described as friendly and cooperative but they can also show behavioral problems such as hyperactivity, bad humor, temper tantrums and poor in...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2012.04.010

    authors: Terrone G,D'Amico A,Imperati F,Carella M,Palumbo O,Gentile M,Canani RB,Melis D,Romano A,Parente I,Riccitelli M,Del Giudice E

    更新日期:2012-08-01 00:00:00

  • Novel homozygous mutations in Desert hedgehog gene in patients with 46,XY complete gonadal dysgenesis and prediction of its structural and functional implications by computational methods.

    abstract::Male to female sex reversal in patients with 46,XY karyotype results from the failure of development of testis which may be due to mutations in the SRY gene. Only 10-15% of cases of 46,XY gonadal dysgenesis are accounted for by different types of mutations in the SRY gene. Hence, majority of such patients may have mut...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2011.04.010

    authors: Das DK,Sanghavi D,Gawde H,Idicula-Thomas S,Vasudevan L

    更新日期:2011-11-01 00:00:00

  • Molecular genetic analysis of trinucleotide repeat disorders (TRDs) in Indian population and application of repeat primed PCR.

    abstract::Trinucleotide repeat disorders (TRDs) are a set of genetic disorders caused by trinucleotide repeat expansion in certain genes that exceed the normal, stable threshold, which varies from gene to gene. A dynamic mutation in a healthy gene may increase the repeat count and result in a defective gene. At present there ar...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2014.12.010

    authors: Das Bhowmik A,Rangaswamaiah S,Srinivas G,Dalal AB

    更新日期:2015-03-01 00:00:00

  • The genetic basis of inherited anomalies of the teeth. Part 1: clinical and molecular aspects of non-syndromic dental disorders.

    abstract::The genetic control of dental development represents a complex series of events, which can very schematically be divided in two pathways: specification of type, size and position of each dental organ, and specific processes for the formation of enamel and dentin. Several genes linked with early tooth positioning and d...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2008.02.009

    authors: Bailleul-Forestier I,Molla M,Verloes A,Berdal A

    更新日期:2008-07-01 00:00:00

  • A de novo 8q22.2-24.3 duplication in a patient with mild phenotype.

    abstract::We report a new case of 8q interstitial duplication in a patient with dysmorphic features, umbilical hernia, cryptorchidism, short stature, congenital heart defect and mild mental retardation (MR). Chromosome analysis with high resolution QFQ bands showed 46,XY, 8q+, which was interpreted as a partial duplication of t...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2011.09.001

    authors: Concolino D,Iembo MA,Moricca MT,Rapsomaniki M,Marotta R,Galesi O,Fichera M,Romano C,Strisciuglio P

    更新日期:2012-01-01 00:00:00

  • Rare homozygous nonsense variant in AIMP1 causing Early Onset Epileptic Encephalopathy with Burst Suppression (EOEE-BS).

    abstract::Pathogenic variants in AIMP1 gene are rare causes of neurologic disorders. Homozygous frameshift and nonsense variants in AIMP1 have been described in severe neurodegenerative disease. This is the third report of a homozygous nonsense variant in AIMP1 [c.115 C > T (p.Gln39*)] in a girl with severe neonatal onset epile...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2020.103970

    authors: Gupta S,Schwab M,Valdez-Gonzalez K,Segal E

    更新日期:2020-09-01 00:00:00

  • RORB gene and 9q21.13 microdeletion: report on a patient with epilepsy and mild intellectual disability.

    abstract::Copy number variants represent an important cause of neurodevelopmental disorders including epilepsy, which is genetically determined in 40% of cases. Epilepsy is caused by chromosomal imbalances or mutations in genes encoding subunits of neuronal voltage- or ligand-gated ion channels or proteins related to neuronal m...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2013.12.001

    authors: Baglietto MG,Caridi G,Gimelli G,Mancardi M,Prato G,Ronchetto P,Cuoco C,Tassano E

    更新日期:2014-01-01 00:00:00

  • A new mutation in COG7 extends the spectrum of COG subunit deficiencies.

    abstract::We describe a patient homozygous for a novel mutation in COG7, coding for one of the subunits of the Conserved Oligomeric Golgi complex, involved in retrograde vesicular trafficking. His brother showed a similar clinical syndrome and glycosylation defect but no DNA could be obtained from this patient. This mutation, c...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2009.06.006

    authors: Zeevaert R,Foulquier F,Cheillan D,Cloix I,Guffon N,Sturiale L,Garozzo D,Matthijs G,Jaeken J

    更新日期:2009-09-01 00:00:00

  • Post-axial polydactyly type A2, overgrowth and autistic traits associated with a chromosome 13q31.3 microduplication encompassing miR-17-92 and GPC5.

    abstract::Genomic rearrangements at chromosome 13q31.3q32.1 have been associated with digital anomalies, dysmorphic features, and variable degree of mental disability. Microdeletions leading to haploinsufficiency of miR17∼92, a cluster of micro RNA genes closely linked to GPC5 in both mouse and human genomes, has recently been ...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2013.06.001

    authors: Kannu P,Campos-Xavier AB,Hull D,Martinet D,Ballhausen D,Bonafé L

    更新日期:2013-08-01 00:00:00

  • Neonatal hyperinsulinemic hypoglycemia in a patient with 9p deletion syndrome.

    abstract::We report the clinical and neuroradiological findings in a young boy harboring the 9p deletion syndrome including the novel findings of thalamic infarction and germinal matrix haemorrhage and neonatal hyperinsulinemic hypoglycemia. Both the hypoglycemic events and the ventriculomegaly found in this patient have previo...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2018.03.009

    authors: Bayat A,Kirchhoff M,Madsen CG,Kreiborg S

    更新日期:2018-08-01 00:00:00

  • Clinico-pathological manifestations of variant late infantile neuronal ceroid lipofuscinosis (vLINCL) caused by a novel mutation in MFSD8 gene.

    abstract::Neuronal ceroid lipofuscinosis (NCL) refers to a growing heterogeneous group of neurodegenerative disorders characterized by lysosomal accumulation of abnormal autofluorescent material. NCLs are traditionally classified clinically according to their age of onset. Variable late infantile NCL (vLINCL) is the most geneti...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2014.09.004

    authors: Mandel H,Cohen Katsanelson K,Khayat M,Chervinsky I,Vladovski E,Iancu TC,Indelman M,Horovitz Y,Sprecher E,Shalev SA,Spiegel R

    更新日期:2014-11-01 00:00:00

  • Synophrys.

    abstract:INTRODUCTION:Meeting of the medial eyebrows in the midline (synophrys) may serve as a cutaneous marker lesion for syndromal disorders (e.g. Cornelia de Lange syndrome). CASE PRESENTATION:A 31-year-old man showed supercilia forming a single band of terminal hairs between left and right lateral orbital rim. Medical exam...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2010.02.001

    authors: Möhrenschlager M,Lauenstein M,Ring J,Steiner C

    更新日期:2010-07-01 00:00:00

  • Genotype-phenotype analysis of 18q12.1-q12.2 copy number variation in autism.

    abstract::Autism Spectrum Disorders (ASD) are complex neurodevelopmental conditions characterized by delays in social interactions and communication as well as displays of restrictive/repetitive interests. DNA copy number variants have been identified as a genomic susceptibility factor in ASDs and imply significant genetic hete...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2013.05.006

    authors: Wang P,Carrion P,Qiao Y,Tyson C,Hrynchak M,Calli K,Lopez-Rangel E,Andrieux J,Delobel B,Duban-Bedu B,Thuresson AC,Annerén G,Liu X,Rajcan-Separovic E,Suzanne Lewis ME

    更新日期:2013-08-01 00:00:00

  • Ring chromosome 12 with inverted microduplication of 12p13.3 involving the Von Willebrand Factor gene associated with cryptogenic stroke in a young adult male.

    abstract::We report a 35-year-old male with a ring chromosome 12 originally diagnosed 20 years prior to presentation with an ischemic stroke. Array CGH analysis revealed a sub-microscopic microdeletion and microduplication within 12p13.3 and a microdeletion in 12q24.33. FISH analysis further revealed that the duplication was in...

    journal_title:European journal of medical genetics

    pub_type: 信件

    doi:10.1016/j.ejmg.2010.09.014

    authors: Nik-Zainal S,Cotter PE,Willatt LR,Abbott K,O'Brien EW

    更新日期:2011-01-01 00:00:00

  • Exome sequencing identifies a novel homozygous variant in NDRG4 in a family with infantile myofibromatosis.

    abstract::Infantile myofibromatosis (IM) is a rare disorder characterized by the development of benign tumors in the skin, muscle, bone, and viscera. The incidence is 1/150,000 live births and the disease is the most common cause of fibrous tumors in infancy. Cases which lack visceral involvement generally have a more benign co...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2014.08.010

    authors: Linhares ND,Freire MC,Cardenas RG,Pena HB,Bahia M,Pena SD

    更新日期:2014-11-01 00:00:00

  • Determination of the deletion breakpoints in two patients with contiguous gene syndrome encompassing CYBB gene.

    abstract::X-linked chronic granulomatous disease is a primary immunodeficiency caused by mutations in CYBB. Although large deletions involving CYBB are known to cause contiguous gene syndrome (CGS), only a few patients have been studied precisely at the molecular levels. Our study determined the deletion breakpoints in two pati...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2010.08.003

    authors: Yamada M,Arai T,Oishi T,Hatano N,Kobayashi I,Kubota M,Suzuki N,Yoda M,Kawamura N,Ariga T

    更新日期:2010-11-01 00:00:00

  • A de novo mutation in ZMYND11, a candidate gene for 10p15.3 deletion syndrome, is associated with syndromic intellectual disability.

    abstract::We report a boy with severe syndromic intellectual disability who has a de novo mutation in the ZMYND11 gene. Arguments for pathogenicity of this mutation are found in cases from the literature, especially several with 10p15.3 deletions, harbouring ZMYND11. Additional reports of ZMYND11 mutations in cases with syndrom...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2014.09.002

    authors: Cobben JM,Weiss MM,van Dijk FS,De Reuver R,de Kruiff C,Pondaag W,Hennekam RC,Yntema HG

    更新日期:2014-11-01 00:00:00

  • Duplication of the Wolf-Hirschhorn syndrome critical region causes neurodevelopmental delay.

    abstract::Wolf-Hirschhorn Syndrome (WHS) is caused by deletions on chromosome 4p and is clinically well defined. Genotype-phenotype correlations of patients with WHS point to a critical locus to be responsible for the main characteristics of this disorder. Submicroscopic duplications of this region, however, are not known. Here...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2010.02.004

    authors: Hannes F,Drozniewska M,Vermeesch JR,Haus O

    更新日期:2010-05-01 00:00:00

  • Mayer-Rokitansky-Künster-Hauser syndrome due to 2q12.1q14.1 deletion: PAX8 the causing gene?

    abstract::Mayer-Rokitansky-Küster-Hauser syndrome (MRKH) is a rare malformative disorder, characterized by congenital aplasia of the uterus and the upper two thirds of the vagina (MIM #277000). For a majority of patients, the disorder remained without identified genetic cause. However, four recurrent microdeletions, i.e. 1q21.1...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2019.103812

    authors: Smol T,Ribero-Karrouz W,Edery P,Gorduza DB,Catteau-Jonard S,Manouvrier-Hanu S,Ghoumid J

    更新日期:2020-04-01 00:00:00

  • Current state of knowledge in Chorea-Acanthocytosis as core Neuroacanthocytosis syndrome.

    abstract::Neuroacanthocytosis (NA) syndromes are a group of rare diseases characterized by neurological disorders and misshaped spiky red blood cells (acanthocytes) including Chorea-Acanthocytosis (ChAc), McLeod syndrome (MLS), Huntington disease-like 2 (HDL 2), pantothenate kinase-associated neurodegeneration (PKAN), abeta- an...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2017.12.007

    authors: Peikert K,Danek A,Hermann A

    更新日期:2018-11-01 00:00:00

  • Clinical and genetic study of two patients with Zimmermann-Laband syndrome and literature review.

    abstract::Zimmermann-Laband syndrome (ZLS) is a rare MCA/MR condition mainly characterized by gingival hypertrophy, hypo/aplastic nails and distal phalanges, hypertrichosis and intellectual disability. The molecular basis of ZLS is unknown. Most patients are sporadic, although familial aggregation is also observed with differen...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2013.08.004

    authors: Castori M,Valiante M,Pascolini G,Leuzzi V,Pizzuti A,Grammatico P

    更新日期:2013-10-01 00:00:00

  • Non-mosaic uniparental trisomy 16 presenting with asplenia syndrome and placental abruption: a case report and literature review.

    abstract::Non-mosaic trisomy 16 is rarely seen in later gestation. Herein, we report a fetus with uniparental complete trisomy 16 manifesting with asplenia syndrome, left hand deformity (only 3 deformed fingers on the left hand) and a left low-set ear. The pregnancy ended in severe placental abruption and resultant fetal demise...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ejmg.2013.01.010

    authors: Su MT,Liang YL,Chen JC,Sun HS,Chang FM,Kuo PL

    更新日期:2013-04-01 00:00:00

  • Finger creases lend a hand in Kabuki syndrome.

    abstract::Kabuki syndrome (KS) is a rare syndrome associating malformations with intellectual deficiency and numerous visceral, orthopedic, endocrinological, immune and autoimmune complications. The early establishment of a diagnostic of KS leads to better care of the patients and therefore prevents complications such as percep...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2013.07.005

    authors: Michot C,Corsini C,Sanlaville D,Baumann C,Toutain A,Philip N,Busa T,Holder M,Faivre L,Odent S,Delrue MA,Till M,Jacquemont ML,Cordier MP,Goldenberg A,Sanchez E,Alix E,Poisson S,Kayirangwa H,Lacombe D,Gilbert-Dussar

    更新日期:2013-10-01 00:00:00

  • Expanding the clinical spectrum of SPG11 gene mutations in recessive hereditary spastic paraplegia with thin corpus callosum.

    abstract::Hereditary spastic paraplegia (HSP) represents a large group of neurological disorders characterized by progressive spasticity of the lower limbs. One subtype of HSP shows an autosomal recessive form of inheritance with thin corpus callosum (ARHSP-TCC), and displays genetic heterogeneity with four known loci. We ident...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2010.10.006

    authors: Abdel Aleem A,Abu-Shahba N,Swistun D,Silhavy J,Bielas SL,Sattar S,Gleeson JG,Zaki MS

    更新日期:2011-01-01 00:00:00

  • Genetic analysis of Charcot-Marie-Tooth disease in Denmark and the implementation of a next generation sequencing platform.

    abstract::Charcot-Marie-Tooth disease (CMT) is a heterogeneous group of hereditary polyneuropathies. Variants in more than 80 different genes have been associated with the disorder. In recent years, the introduction of next generation sequencing (NGS) techniques have completely changed the genetic diagnostic approach from the a...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2018.04.003

    authors: Vaeth S,Christensen R,Dunø M,Lildballe DL,Thorsen K,Vissing J,Svenstrup K,Hertz JM,Andersen H,Jensen UB

    更新日期:2019-01-01 00:00:00

  • Humanity and human DNA.

    abstract::Genetics has marked the second half of the 20th century by addressing such formidable problems as the identification of our genes and their role, their interaction with the environment, and even their therapeutic uses. The identification of genes raises questions about differences between humans and non-humans, as wel...

    journal_title:European journal of medical genetics

    pub_type: 杂志文章

    doi:10.1016/j.ejmg.2012.05.007

    authors: Mattei JF

    更新日期:2012-10-01 00:00:00