Evolutionary biology and biodiversity research at BGRS-2018.

Abstract:

:

journal_name

BMC Evol Biol

journal_title

BMC evolutionary biology

authors

Orlov YL,Baranova AV,Kolchanov NA,Moroz LL

doi

10.1186/s12862-019-1368-5

subject

pub_date

2019-02-26 00:00:00

pages

43

issue

Suppl 1

issn

1471-2148

pii

10.1186/s12862-019-1368-5

journal_volume

19

pub_type

  • The explosive radiation of Cheirolophus (Asteraceae, Cardueae) in Macaronesia.

    abstract:BACKGROUND:Considered a biodiversity hotspot, the Canary Islands have been the key subjects of numerous evolutionary studies concerning a large variety of organisms. The genus Cheirolophus (Asteraceae) represents one of the largest plant radiations in the Canarian archipelago. In contrast, only a few species occur in t...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-14-118

    authors: Vitales D,Garnatje T,Pellicer J,Vallès J,Santos-Guerra A,Sanmartín I

    更新日期:2014-06-02 00:00:00

  • Tracing the origin of functional and conserved domains in the human proteome: implications for protein evolution at the modular level.

    abstract:BACKGROUND:The functional repertoire of the human proteome is an incremental collection of functions accomplished by protein domains evolved along the Homo sapiens lineage. Therefore, knowledge on the origin of these functionalities provides a better understanding of the domain and protein evolution in human. The lack ...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-6-91

    authors: Pal LR,Guda C

    更新日期:2006-11-07 00:00:00

  • Beneficial laggards: multilevel selection, cooperative polymorphism and division of labour in threshold public good games.

    abstract:BACKGROUND:The origin and stability of cooperation is a hot topic in social and behavioural sciences. A complicated conundrum exists as defectors have an advantage over cooperators, whenever cooperation is costly so consequently, not cooperating pays off. In addition, the discovery that humans and some animal populatio...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-10-336

    authors: Boza G,Számadó S

    更新日期:2010-11-02 00:00:00

  • The mitochondrial phylogeny of an ancient lineage of ray-finned fishes (Polypteridae) with implications for the evolution of body elongation, pelvic fin loss, and craniofacial morphology in Osteichthyes.

    abstract:BACKGROUND:The family Polypteridae, commonly known as "bichirs", is a lineage that diverged early in the evolutionary history of Actinopterygii (ray-finned fish), but has been the subject of far less evolutionary study than other members of that clade. Uncovering patterns of morphological change within Polypteridae pro...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-10-21

    authors: Suzuki D,Brandley MC,Tokita M

    更新日期:2010-01-25 00:00:00

  • Neutral genomic signatures of host-parasite coevolution.

    abstract:BACKGROUND:Coevolution is a selective process of reciprocal adaptation in hosts and parasites or in mutualistic symbionts. Classic population genetics theory predicts the signatures of selection at the interacting loci of both species, but not the neutral genome-wide polymorphism patterns. To bridge this gap, we build ...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-019-1556-3

    authors: Živković D,John S,Verin M,Stephan W,Tellier A

    更新日期:2019-12-19 00:00:00

  • Phylogeographic history of flat periwinkles, Littorina fabalis and L. obtusata.

    abstract:BACKGROUND:The flat periwinkles, Littorina fabalis and L. obtusata, are two sister species widely distributed throughout the Northern Atlantic shores with high potential to inform us about the process of ecological speciation in the intertidal. However, whether gene flow has occurred during their divergence is still a ...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-019-1561-6

    authors: Sotelo G,Duvetorp M,Costa D,Panova M,Johannesson K,Faria R

    更新日期:2020-02-10 00:00:00

  • The role of positive selection in determining the molecular cause of species differences in disease.

    abstract:BACKGROUND:Related species, such as humans and chimpanzees, often experience the same disease with varying degrees of pathology, as seen in the cases of Alzheimer's disease, or differing symptomatology as in AIDS. Furthermore, certain diseases such as schizophrenia, epithelial cancers and autoimmune disorders are far m...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-8-273

    authors: Vamathevan JJ,Hasan S,Emes RD,Amrine-Madsen H,Rajagopalan D,Topp SD,Kumar V,Word M,Simmons MD,Foord SM,Sanseau P,Yang Z,Holbrook JD

    更新日期:2008-10-06 00:00:00

  • General functions to transform associate data to host data, and their use in phylogenetic inference from sequences with intra-individual variability.

    abstract:BACKGROUND:Amongst the most commonly used molecular markers for plant phylogenetic studies are the nuclear ribosomal internal transcribed spacers (ITS). Intra-individual variability of these multicopy regions is a very common phenomenon in plants, the causes of which are debated in literature. Phylogenetic reconstructi...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-8-86

    authors: Göker M,Grimm GW

    更新日期:2008-03-18 00:00:00

  • Does negative auto-regulation increase gene duplicability?

    abstract:BACKGROUND:A prerequisite for a duplication to spread through and persist in a given population is retaining expression of both gene copies. Yet changing a gene's dosage is frequently detrimental to fitness. Consequently, dosage-sensitive genes are less likely to duplicate. However, in cases where the level of gene pro...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-9-193

    authors: Warnecke T,Wang GZ,Lercher MJ,Hurst LD

    更新日期:2009-08-07 00:00:00

  • Evolution of plant senescence.

    abstract:BACKGROUND:Senescence is integral to the flowering plant life-cycle. Senescence-like processes occur also in non-angiosperm land plants, algae and photosynthetic prokaryotes. Increasing numbers of genes have been assigned functions in the regulation and execution of angiosperm senescence. At the same time there has bee...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-9-163

    authors: Thomas H,Huang L,Young M,Ougham H

    更新日期:2009-07-14 00:00:00

  • Tubulin evolution in insects: gene duplication and subfunctionalization provide specialized isoforms in a functionally constrained gene family.

    abstract:BACKGROUND:The completion of 19 insect genome sequencing projects spanning six insect orders provides the opportunity to investigate the evolution of important gene families, here tubulins. Tubulins are a family of eukaryotic structural genes that form microtubules, fundamental components of the cytoskeleton that media...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-10-113

    authors: Nielsen MG,Gadagkar SR,Gutzwiller L

    更新日期:2010-04-27 00:00:00

  • Distribution of events of positive selection and population differentiation in a metabolic pathway: the case of asparagine N-glycosylation.

    abstract:BACKGROUND:Asparagine N-Glycosylation is one of the most important forms of protein post-translational modification in eukaryotes. This metabolic pathway can be subdivided into two parts: an upstream sub-pathway required for achieving proper folding for most of the proteins synthesized in the secretory pathway, and a d...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-12-98

    authors: Dall'Olio GM,Laayouni H,Luisi P,Sikora M,Montanucci L,Bertranpetit J

    更新日期:2012-06-25 00:00:00

  • A genome-wide scan for genes under balancing selection in Drosophila melanogaster.

    abstract:BACKGROUND:In the history of population genetics balancing selection has been considered as an important evolutionary force, yet until today little is known about its abundance and its effect on patterns of genetic diversity. Several well-known examples of balancing selection have been reported from humans, mice, plant...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-016-0857-z

    authors: Croze M,Wollstein A,Božičević V,Živković D,Stephan W,Hutter S

    更新日期:2017-01-13 00:00:00

  • Genomic sequence analyses of classical and non-classical lamprey progesterone receptor genes and the inference of homologous gene evolution in metazoans.

    abstract:BACKGROUND:Nuclear progesterone receptor (nPR) is an evolutionary innovation in vertebrates that mediates genomic responses to progesterone. Vertebrates also respond to progesterone via membrane progesterone receptors (mPRs) or membrane associated progesterone receptors (MAPRs) through rapid nongenomic mechanisms. Lamp...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-019-1463-7

    authors: Ren J,Chung-Davidson YW,Jia L,Li W

    更新日期:2019-07-01 00:00:00

  • Globins in the marine annelid Platynereis dumerilii shed new light on hemoglobin evolution in bilaterians.

    abstract:BACKGROUND:How vascular systems and their respiratory pigments evolved is still debated. While many animals present a vascular system, hemoglobin exists as a blood pigment only in a few groups (vertebrates, annelids, a few arthropod and mollusk species). Hemoglobins are formed of globin sub-units, belonging to multigen...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-020-01714-4

    authors: Song S,Starunov V,Bailly X,Ruta C,Kerner P,Cornelissen AJM,Balavoine G

    更新日期:2020-12-29 00:00:00

  • Phylogeny, structural evolution and functional diversification of the plant PHOSPHATE1 gene family: a focus on Glycine max.

    abstract:BACKGROUND:PHOSPHATE1 (PHO1) gene family members have diverse roles in plant growth and development, and they have been studied in Arabidopsis, rice, and Physcomitrella. However, it has yet to be described in other plants. Therefore, we surveyed the evolutionary patterns of genomes within the plant PHO1 gene family, fo...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-13-103

    authors: He L,Zhao M,Wang Y,Gai J,He C

    更新日期:2013-05-24 00:00:00

  • Environment-dependent microevolution in a Mediterranean pine (Pinus pinaster Aiton).

    abstract:BACKGROUND:A central question for understanding the evolutionary responses of plant species to rapidly changing environments is the assessment of their potential for short-term (in one or a few generations) genetic change. In our study, we consider the case of Pinus pinaster Aiton (maritime pine), a widespread Mediterr...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-014-0200-5

    authors: Alía R,Chambel R,Notivol E,Climent J,González-Martínez SC

    更新日期:2014-09-23 00:00:00

  • Molecular evidence for ten species and Oligo-Miocene vicariance within a nominal Australian gecko species (Crenadactylus ocellatus, Diplodactylidae).

    abstract:BACKGROUND:Molecular studies have revealed that many putative 'species' are actually complexes of multiple morphologically conservative, but genetically divergent 'cryptic species'. In extreme cases processes such as non-adaptive diversification (speciation without divergent selection) could mask the existence of ancie...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-10-386

    authors: Oliver PM,Adams M,Doughty P

    更新日期:2010-12-15 00:00:00

  • The serendipitous origin of chordate secretin peptide family members.

    abstract:BACKGROUND:The secretin family is a pleotropic group of brain-gut peptides with affinity for class 2 G-protein coupled receptors (secretin family GPCRs) proposed to have emerged early in the metazoan radiation via gene or genome duplications. In human, 10 members exist and sequence and functional homologues and ligand-...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-10-135

    authors: Cardoso JC,Vieira FA,Gomes AS,Power DM

    更新日期:2010-05-06 00:00:00

  • The evolution of heat shock protein sequences, cis-regulatory elements, and expression profiles in the eusocial Hymenoptera.

    abstract:BACKGROUND:The eusocial Hymenoptera have radiated across a wide range of thermal environments, exposing them to significant physiological stressors. We reconstructed the evolutionary history of three families of Heat Shock Proteins (Hsp90, Hsp70, Hsp40), the primary molecular chaperones protecting against thermal damag...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-015-0573-0

    authors: Nguyen AD,Gotelli NJ,Cahan SH

    更新日期:2016-01-19 00:00:00

  • Motion dazzle and the effects of target patterning on capture success.

    abstract:BACKGROUND:Stripes and other high contrast patterns found on animals have been hypothesised to cause "motion dazzle", a type of defensive coloration that operates when in motion, causing predators to misjudge the speed and direction of object movement. Several recent studies have found some support for this idea, but l...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-014-0201-4

    authors: Hughes AE,Troscianko J,Stevens M

    更新日期:2014-09-13 00:00:00

  • Early Miocene origin and cryptic diversification of South American salamanders.

    abstract:BACKGROUND:The currently recognized species richness of South American salamanders is surprisingly low compared to North and Central America. In part, this low richness may be due to the salamanders being a recent arrival to South America. Additionally, the number of South American salamander species may be underestima...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-13-59

    authors: Elmer KR,Bonett RM,Wake DB,Lougheed SC

    更新日期:2013-03-04 00:00:00

  • Reconstruction of the ancestral marsupial karyotype from comparative gene maps.

    abstract:BACKGROUND:The increasing number of assembled mammalian genomes makes it possible to compare genome organisation across mammalian lineages and reconstruct chromosomes of the ancestral marsupial and therian (marsupial and eutherian) mammals. However, the reconstruction of ancestral genomes requires genome assemblies to ...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-13-258

    authors: Deakin JE,Delbridge ML,Koina E,Harley N,Alsop AE,Wang C,Patel VS,Graves JA

    更新日期:2013-11-21 00:00:00

  • Female responses to experimental removal of sexual selection components in Drosophila melanogaster.

    abstract:BACKGROUND:Despite the common assumption that multiple mating should in general be favored in males, but not in females, to date there is no consensus on the general impact of multiple mating on female fitness. Notably, very little is known about the genetic and physiological features underlying the female response to ...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-014-0239-3

    authors: Innocenti P,Flis I,Morrow EH

    更新日期:2014-11-19 00:00:00

  • Acetylcholinesterase alterations reveal the fitness cost of mutations conferring insecticide resistance.

    abstract:BACKGROUND:Insecticide resistance is now common in insects due to the frequent use of chemicals to control them, which provides a useful tool to study the adaptation of eukaryotic genome to new environments. Although numerous potential mutations may provide high level of resistance, only few alleles are found in insect...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-4-5

    authors: Shi MA,Lougarre A,Alies C,Frémaux I,Tang ZH,Stojan J,Fournier D

    更新日期:2004-02-06 00:00:00

  • Evolutionary profiling reveals the heterogeneous origins of classes of human disease genes: implications for modeling disease genetics in animals.

    abstract:BACKGROUND:The recent expansion of whole-genome sequence data available from diverse animal lineages provides an opportunity to investigate the evolutionary origins of specific classes of human disease genes. Previous studies have observed that human disease genes are of particularly ancient origin. While this suggests...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-014-0212-1

    authors: Maxwell EK,Schnitzler CE,Havlak P,Putnam NH,Nguyen AD,Moreland RT,Baxevanis AD

    更新日期:2014-10-04 00:00:00

  • Natural selection drove metabolic specialization of the chromatophore in Paulinella chromatophora.

    abstract:BACKGROUND:Genome degradation of host-restricted mutualistic endosymbionts has been attributed to inactivating mutations and genetic drift while genes coding for host-relevant functions are conserved by purifying selection. Unlike their free-living relatives, the metabolism of mutualistic endosymbionts and endosymbiont...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-017-0947-6

    authors: Valadez-Cano C,Olivares-Hernández R,Resendis-Antonio O,DeLuna A,Delaye L

    更新日期:2017-04-14 00:00:00

  • Cooperators Unite! Assortative linking promotes cooperation particularly for medium sized associations.

    abstract:BACKGROUND:Evolution of cooperative behaviour is widely studied in different models where interaction is heterogeneous, although static among individuals. However, in nature individuals can often recognize each other and chose, besides to cooperate or not, to preferentially associate with or to avoid certain individual...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-10-173

    authors: Kun A,Boza G,Scheuring I

    更新日期:2010-06-11 00:00:00

  • Phylogeny of Myzostomida (Annelida) and their relationships with echinoderm hosts.

    abstract:BACKGROUND:Myzostomids are marine annelids, nearly all of which live symbiotically on or inside echinoderms, chiefly crinoids, and to a lesser extent asteroids and ophiuroids. These symbionts possess a variety of adult body plans and lifestyles. Most described species live freely on the exterior of their hosts as adult...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/s12862-014-0170-7

    authors: Summers MM,Rouse GW

    更新日期:2014-08-28 00:00:00

  • Structural and functional divergence of two fish aquaporin-1 water channels following teleost-specific gene duplication.

    abstract:BACKGROUND:Teleost radiation in the oceans required specific physiological adaptations in eggs and early embryos to survive in the hyper-osmotic seawater. Investigating the evolution of aquaporins (AQPs) in these vertebrates should help to elucidate how mechanisms for water homeostasis evolved. The marine teleost gilth...

    journal_title:BMC evolutionary biology

    pub_type: 杂志文章

    doi:10.1186/1471-2148-8-259

    authors: Tingaud-Sequeira A,Chauvigné F,Fabra M,Lozano J,Raldúa D,Cerdà J

    更新日期:2008-09-23 00:00:00