Genetic identification of istiophorid larvae from the Gulf of Mexico based on the analysis of mitochondrial DNA control region sequences.

Abstract:

:Assigning relative importance of spawning and nursery habitats for threatened and endangered teleosts, such as those seen in the Gulf of Mexico (GoM), relies on the proper identification of the early life-history stages of the species of concern. Here, sequencing a portion of the mitochondrial DNA (mtDNA) control region (CR) I as barcodes is recommended to identify istiophorid (billfish) larvae in the Atlantic Ocean because of its high resolution and the intrinsic value of the levels of genetic variation that can be extracted from these data. The universality of the primers employed here demonstrates their utility for not only the positive identification of istiophorids in the GoM, but for any larval teleost occurring in areas recognized as larval hotspots worldwide.

journal_name

J Fish Biol

journal_title

Journal of fish biology

authors

McKenzie JL,Alvarado Bremer JR

doi

10.1111/jfb.13212

subject

Has Abstract

pub_date

2017-03-01 00:00:00

pages

1070-1079

issue

3

eissn

0022-1112

issn

1095-8649

journal_volume

90

pub_type

杂志文章
  • New records of coastal fishes in the northern Rio de Janeiro State, Brazil, with comments on the biogeography of the south-western Atlantic Ocean.

    abstract::The distribution limits in the Atlantic of Callorhinchus callorynchus (Callorhinchidae) and Odontesthes argentinensis (Atherinopsidae) are extended northwards to 22° 22' S and 22° 31' S, respectively, whereas that of Lile piquitinga (Clupeidae) is extended southwards to 22° 22' S. Their occurrence in the north of Rio ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.03035.x

    authors: Di Dario F,Petry AC,Mincarone MM,Pereira MM,dos Santos RM

    更新日期:2011-08-01 00:00:00

  • Using scale characteristics and water temperature to reconstruct growth rates of juvenile steelhead Oncorhynchus mykiss.

    abstract::Juvenile steelhead Oncorhynchus mykiss from a northern California Central Valley population were reared in a controlled laboratory experiment. Significantly different rates of growth were observed among fish reared under two ration treatments and three temperature treatments (8, 14 and 20°C). Wider circulus spacing an...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12254

    authors: Beakes MP,Sharron S,Charish R,Moore JW,Satterthwaite WH,Sturm E,Wells BK,Sogard SM,Mangel M

    更新日期:2014-01-01 00:00:00

  • Parental identity influences progeny responses to incubation thermal stress in sockeye salmon Onchorhynchus nerka.

    abstract::The influence of individual parentage on progeny responses to early developmental temperature stress was examined in a cross-fertilization experiment using sockeye salmon Oncorhynchus nerka. Differences in survival, hatch timing and size were examined among five paternally linked and five maternally linked offspring f...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.03190.x

    authors: Burt JM,Hinch SG,Patterson DA

    更新日期:2012-02-01 00:00:00

  • Anadromy and heterogenous population of a tropical shad Tenualosa ilisha in Malaysia, as revealed by otolith microchemistry and molecular evidence.

    abstract::Tenualosa ilisha was found recently in the Perak River in western Peninsular Malaysia. Molecular phylogenetic and haplotype network analyses suggest that T. ilisha has two genetically distinct populations/groups: (i) Peninsular Malaysia (Malaysia population), and (ii) Peninsular Malaysia, Thailand, India and Banglades...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.14154

    authors: Arai T,Taha H,Amalina R,Iizuka Y,Chang CW

    更新日期:2019-12-01 00:00:00

  • Dietary variations within a family of ambush predators (Platycephalidae) occupying different habitats and environments in the same geographical region.

    abstract::This study has determined the extents and basis for variations in the composition of the prey ingested by the abundant species of a family highly adapted for ambush predation, i.e. Platycephalidae, in a region (south-western Australia) where that family is found in different habitats and environments. Dietary data wer...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12612

    authors: Coulson PG,Platell ME,Clarke KR,Potter IC

    更新日期:2015-03-01 00:00:00

  • Hemiodus bimaculatus, a new species of Hemiodontidae from the Rio Tapajós drainage, Brazil (Ostariophysi: Characiformes).

    abstract::Hemiodus bimaculatus sp. nov., is described from tributaries of the Rio Juruena and Rio Teles Pires in the upper Rio Tapajós basin. The new species is diagnosed from most congeners, except Hemiodus jatuarana, by having a conspicuous circular or horizontally elongate dark blotch on the caudal peduncle (v. inconspicuous...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13972

    authors: Nogueira AF,Langeani F,Netto-Ferreira AL

    更新日期:2019-05-01 00:00:00

  • Twenty-four hours in the life of Zingel asper.

    abstract::For the first time, radio-tracking observations were made over 24 h cycles during the growing season to quantify the habitat use and home range of Zingel asper, a critically endangered fish species, endemic to the Rhône River with a high risk of extinction (IUCN). New advances in radio telemetry with regard to the siz...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2009.02315.x

    authors: Cavalli L,Knight CM,Durbec M,Chappaz R,Gozlan RE

    更新日期:2009-08-01 00:00:00

  • Out of the pot and into the fire: Explaining the vulnerability of an endangered small headwater stream fish to black-bass Micropterus spp. invasion.

    abstract::Introduced predatory fishes have had consistently severe consequences for native fishes in stream environments around the world, although the drivers of these effects are often unclear. In the Swartkops River headwaters in South Africa, native Eastern Cape redfin Pseudobarbus afer were always absent from sites occupie...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13562

    authors: Ellender BR,Weyl OLF,Alexander ME,Luger AM,Nagelkerke LAJ,Woodford DJ

    更新日期:2018-04-01 00:00:00

  • Olfactory transduction pathways in the Senegalese sole Solea senegalensis.

    abstract::This study tested whether differences in sensitivity between the upper and lower olfactory epithelia of Solea senegalensis are associated with different odorant receptors and transduction pathways, using the electro-olfactogram. Receptor mechanisms were assessed by cross-adaptation with amino acids (L-cysteine, L-phen...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12185

    authors: Velez Z,Hubbard PC,Barata EN,Canário AV

    更新日期:2013-09-01 00:00:00

  • Functional morphology of the tetra fish Astyanax lacustris differs between divergent habitats in the Pantanal wetlands.

    abstract::This study investigated whether the body morphology of the tetra fish Astyanax lacustris (previously Astyanax asuncionensis) varied between populations inhabiting one lagoon (a lentic, shallow environment, with great habitat complexity created by aquatic macrophytes) and an adjacent river (a deeper, lotic environment ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13026

    authors: Costa-Pereira R,Araújo MS,Paiva F,Tavares LE

    更新日期:2016-08-01 00:00:00

  • Geographical variability in life-history traits of a midslope dogfish: the brier shark Deania calcea.

    abstract::Deania calcea (n = 420) were collected from the catch of deep-water trawlers in the southern and eastern scalefish and shark fishery in southern Australia during the years 2008-2011. The total length (LT ) range varied between sexes, females being larger (n = 264; 280-1530 mm) than males (n = 156; 310-921 mm). The rep...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12756

    authors: Rochowski BE,Walker TI,Day RW

    更新日期:2015-09-01 00:00:00

  • Effect of recreational-fisheries management on fish biodiversity in gravel pit lakes, with contrasts to unmanaged lakes.

    abstract::Gravel pit lakes are novel ecosystems that can be colonized by fish through natural or anthropogenic pathways. In central Europe, many of them are managed by recreational anglers and thus experience regular fish stocking. However, also unmanaged gravel pits may be affected by stocking, either through illegal fish intr...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13989

    authors: Matern S,Emmrich M,Klefoth T,Wolter C,Nikolaus R,Wegener N,Arlinghaus R

    更新日期:2019-06-01 00:00:00

  • Comparing anadromous brown trout Salmo trutta in small, neighbouring catchments across contrasting landscapes: What is the role of environment in determining life-history characteristics?

    abstract::Study of anadromous brown trout Salmo trutta in Orkney, U.K., burns (small streams) with a common-garden sea in Scapa Flow supports the key role of nutrient availability in fresh water, independent of day length, as a determinant of smolt age, with a systematic increase in mean smolt age from 1 to 3 years related inve...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13543

    authors: Thomson M,Lyndon AR

    更新日期:2018-03-01 00:00:00

  • Body shape and robustness response to water flow during development of brown trout Salmo trutta parr.

    abstract::Domesticated brown trout Salmo trutta parr were subjected to increased, variable flow under controlled experimental conditions. Using geometric morphometric analyses, K ¯ ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13772

    authors: Fenkes M,Shiels HA,Nudds RL

    更新日期:2018-08-01 00:00:00

  • A robust flow-cytometric protocol for assessing growth rate of hatchery-reared barramundi Lates calcarifer larvae.

    abstract::In this study, a flow-cytometric cell cycle analysis method to assess instantaneous growth rate of whole larvae of the Australian barramundi Lates calcarifer was developed and validated. High-resolution DNA measurements of either fresh, frozen or RNAlater-preserved larvae (gap0-gap1, G(0) -G(1), coefficient of variati...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2012.03278.x

    authors: Domingos JA,Fromm P,Smith-Keune C,Jerry DR

    更新日期:2012-05-01 00:00:00

  • Size-dependent reproductive success of wild zebrafish Danio rerio in the laboratory.

    abstract::Size-dependent reproductive success of wild zebrafish Danio rerio was studied under controlled conditions in the laboratory to further understand the influence of spawner body size on reproductive output and egg and larval traits. Three different spawner size categories attained by size-selective harvesting of the F(1...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2010.02698.x

    authors: Uusi-Heikkilä S,Wolter C,Meinelt T,Arlinghaus R

    更新日期:2010-08-01 00:00:00

  • Interdecadal changes in the community, population and individual levels of the fish fauna of an extensively modified estuary.

    abstract::This study examined inter-period changes over two to three decades in the fish fauna of an urbanized estuary experiencing rapid population growth and a drying climate (Swan-Canning Estuary, Western Australia). Responses were compared at the fish community level (species composition; 1978-2009 in the shallows and 1993-...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13263

    authors: Valesini FJ,Cottingham A,Hallett CS,Clarke KR

    更新日期:2017-05-01 00:00:00

  • Freshwater fish faunas, habitats and conservation challenges in the Caribbean river basins of north-western South America.

    abstract::The remarkable fish diversity in the Caribbean rivers of north-western South America evolved under the influences of the dramatic environmental changes of neogene northern South America, including the Quechua Orogeny and Pleistocene climate oscillations. Although this region is not the richest in South America, endemi...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13018

    authors: Jiménez-Segura LF,Galvis-Vergara G,Cala-Cala P,García-Alzate CA,López-Casas S,Ríos-Pulgarín MI,Arango GA,Mancera-Rodríguez NJ,Gutiérrez-Bonilla F,Álvarez-León R

    更新日期:2016-07-01 00:00:00

  • Domperidone treatment attenuates stress-induced suppression of reproduction in viviparous mosquitofish Gambusia affinis.

    abstract::The aim of this study was to determine the effect of stress on reproduction and the possible involvement of dopaminergic systems in the reproductive stress response in the mosquitofish Gambusia affinis. Exposure of fish to aquaculture stressors (four 10 min episodes of stress, each corresponding to a different stresso...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.14183

    authors: Bhat SK,Ganesh CB

    更新日期:2020-01-01 00:00:00

  • Behavioural and physiological effects of methadone in the perioperative period on the Nile tilapia Oreochromis niloticus.

    abstract::Through the analysis of behavioural changes, this study demonstrates that methadone has behavioural, but not analgesic, effects on Oreochromis niloticus. It provides information that suggests the drug has sedative abilities, as the recovery time was shorter in the fish receiving methadone. Future research, with differ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13959

    authors: Crivelaro RM,Thiesen R,Aldrovani M,Silva PES,Barros Sobrinho AAF,Moraes PC

    更新日期:2019-05-01 00:00:00

  • Development of intestinal ion-transporting mechanisms during smoltification and seawater acclimation in Atlantic salmon Salmo salar.

    abstract::This study investigated the expression of ion transporters involved in intestinal fluid absorption and presents evidence for developmental changes in abundance and tissue distribution of these transporters during smoltification and seawater (SW) acclimation of Atlantic salmon Salmo salar. Emphasis was placed on Na(+) ...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12531

    authors: Sundh H,Nilsen TO,Lindström J,Hasselberg-Frank L,Stefansson SO,McCormick SD,Sundell K

    更新日期:2014-10-01 00:00:00

  • The DNA barcoding of Mediterranean combtooth blennies suggests the paraphyly of some taxa (Perciformes, Blenniidae).

    abstract::A dataset including novel and publicly available mtDNA COI sequences of 14 Mediterranean combtooth blenny species belonging to nine genera was assembled in order to provide a reference dataset for DNA barcoding studies. Some inconsistencies in the current taxonomy of some genera were observed. In particular, the monop...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13897

    authors: Vecchioni L,Marrone F,Belaiba E,Tiralongo F,Bahri-Sfar L,Arculeo M

    更新日期:2019-02-01 00:00:00

  • Diets of coral-dwelling fishes of the genus Gobiodon with evidence of corallivory.

    abstract::Evidence of facultative corallivory is documented in three species of obligate coral-dwelling gobies (genus Gobiodon) based on the presence of spirocysts in gut contents. Coral-dwelling gobies also consumed a broad range of other items with gut contents dominated by algae, invertebrates and amorphous material. Dietary...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2010.02644.x

    authors: Brooker RM,Munday PL,Ainsworth TD

    更新日期:2010-06-01 00:00:00

  • Utilizing stomach content and faecal DNA analysis techniques to assess the feeding behaviour of largemouth bass Micropterus salmoides and bluegill Lepomis macrochirus.

    abstract::In this study, the feeding behaviour of the non-native invasive predatory fishes largemouth bass Micropterus salmoides and bluegill Lepomis macrochirus was studied in the Ezura River, a northern tributary of Lake Biwa, Japan. Prey composition was estimated based on visual examination of stomach contents and faecal DNA...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12341

    authors: Taguchi T,Miura Y,Krueger D,Sugiura S

    更新日期:2014-05-01 00:00:00

  • Variation in rod spectral sensitivity of fishes is best predicted by habitat and depth.

    abstract::Rod spectral sensitivity data (λmax ), measured by microspectrophotometry, were compiled for 403 species of ray-finned fishes in order to examine four hypothesized predictors of rod spectral sensitivity (depth, habitat, diet and temperature). From this database, a subset of species that were known to be adults and ava...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13859

    authors: Schweikert LE,Caves EM,Solie SE,Sutton TT,Johnsen S

    更新日期:2019-07-01 00:00:00

  • New records of angular rough sharks Oxynotus centrina in the coastal waters of Malta, with observations on post-capture resilience and release behaviour.

    abstract::One male and one female angular rough sharks Oxynotus centrina were caught south-east of Malta between May and June at a depth of 60-100 m < 5 km from shore. The immature female (total length, LT 565 mm) was landed dead but the male (535 mm LT ) was found alive. This communication presents important biological observa...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.13641

    authors: Koehler L

    更新日期:2018-06-01 00:00:00

  • Reproductive biology of cuckoo ray Leucoraja naevus.

    abstract::The present study is the first to provide data on the reproductive biology of cuckoo ray Leucoraja naevus in Portuguese continental waters. No difference in size at maturity was detected between sexes, which was estimated as 56 cm total length. Spawning occurs all year round, but maximum activity was during winter mon...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2012.03412.x

    authors: Maia C,Erzini K,Serra-Pereira B,Figueiredo I

    更新日期:2012-09-01 00:00:00

  • Imprint of monsoonal patterns on the fish assemblage in coastal waters of south-east India: a case study.

    abstract::The composition, species richness and diversity of a coastal fish assemblage from the Kalpakkam coast of south-east India are described along with temporal distribution patterns related to seasonal fluctuations in dissolved oxygen, salinity, pH, chlorophyll-a, phytoplankton and zooplankton species richness and density...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/jfb.12461

    authors: Biswas S,Hussain KJ,Das NP,Russell BC,Satpathy KK,Mishra SS

    更新日期:2014-09-01 00:00:00

  • Patterns in composition, abundance and scarring of whale sharks Rhincodon typus near Holbox Island, Mexico.

    abstract::Photo-identification and conventional tagging were used to estimate population size and structure of the whale shark Rhincodon typus near Holbox Island, Mexico. From 2005 to 2008, photographs of spot patterns behind the last gill slit and in a lateral view on the left side of each animal were used to identify individu...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2012.03258.x

    authors: Ramírez-Macías D,Meekan M,De La Parra-Venegas R,Remolina-Suárez F,Trigo-Mendoza M,Vázquez-Juárez R

    更新日期:2012-04-01 00:00:00

  • Reproductive biology of Zearaja chilensis (Chondrichthyes: Rajidae) in the south-east Pacific Ocean.

    abstract::Between 2000 and 2002, three artisanal landing sites were sampled in southern Chile, with data on population structure and reproductive development collected from 5477 yellownose skates Zearaja chilensis. Total length (L(T) ) ranged from 33 to 158 cm for females and 34 to 155 cm for males. No sexual dimorphism was evi...

    journal_title:Journal of fish biology

    pub_type: 杂志文章

    doi:10.1111/j.1095-8649.2011.03164.x

    authors: Bustamante C,Vargas-Caro C,Oddone MC,Concha F,Flores H,Lamilla J,Bennett MB

    更新日期:2012-04-01 00:00:00