Small-molecule ligands of methyl-lysine binding proteins.

Abstract:

:Proteins which bind methylated lysines ("readers" of the histone code) are important components in the epigenetic regulation of gene expression and can also modulate other proteins that contain methyl-lysine such as p53 and Rb. Recognition of methyl-lysine marks by MBT domains leads to compaction of chromatin and a repressed transcriptional state. Antagonists of MBT domains would serve as probes to interrogate the functional role of these proteins and initiate the chemical biology of methyl-lysine readers as a target class. Small-molecule MBT antagonists were designed based on the structure of histone peptide-MBT complexes and their interaction with MBT domains determined using a chemiluminescent assay and ITC. The ligands discovered antagonize native histone peptide binding, exhibiting 5-fold stronger binding affinity to L3MBTL1 than its preferred histone peptide. The first cocrystal structure of a small molecule bound to L3MBTL1 was determined and provides new insights into binding requirements for further ligand design.

journal_name

J Med Chem

authors

Herold JM,Wigle TJ,Norris JL,Lam R,Korboukh VK,Gao C,Ingerman LA,Kireev DB,Senisterra G,Vedadi M,Tripathy A,Brown PJ,Arrowsmith CH,Jin J,Janzen WP,Frye SV

doi

10.1021/jm200045v

subject

Has Abstract

pub_date

2011-04-14 00:00:00

pages

2504-11

issue

7

eissn

0022-2623

issn

1520-4804

journal_volume

54

pub_type

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