Molecular modelling studies of new potential human DNA polymerase α inhibitors.

Abstract:

:The human polymerase α (pol α) is a promising target for the therapy of cancer e.g. of the skin. The authors recently built a homology model of the active site of human DNA pol α. This 3D model was now used for molecular modelling studies with eight novel analogues of 2-butylanilino-dATP, which is a highly selective nucleoside inhibitor of mammalian pol α. Our results suggest that a higher hydrophobicity of a carbohydrate side chain (pointing into a spacious hydrophobic cavity) may enhance the strength of the interaction with the target protein. Moreover, acyclic acyclovir-like derivatives outperformed those with a sugar-moiety, indicating that structural flexibility and higher conformational adaptability has a positive effect on the receptor affinity. Cytotoxicity tests confirmed our theoretical findings. Besides, one of our most promising compounds in the molecular modelling studies revealed high selectivity for the SCC-25 cell line derived from squamous cell carcinoma in man.

authors

Zdrazil B,Schwanke A,Schmitz B,Schäfer-Korting M,Höltje HD

doi

10.3109/14756366.2010.503609

subject

Has Abstract

pub_date

2011-04-01 00:00:00

pages

270-9

issue

2

eissn

1475-6366

issn

1475-6374

journal_volume

26

pub_type

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