当前位置： SCI文献检索 > MOLECULAR PHYLOGENETICS AND EVOLUTION期刊下所有文献 > Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences.

Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences.

Abstract：

:The mammalian order Carnivora has attracted the attention of scientists of various disciplines for decades, leading to intense interest in defining its supra-familial relationships. In the last few years, major changes to the topological structure of the carnivoran tree have been proposed and supported by various molecular data sets, radically changing the traditional view of family composition in this order. Although a sequence of molecular studies have established a growing consensus with respect to most inter-familial relationships, no analysis so far has included all carnivoran lineages (both feliform and caniform) in an integrated data set, so as to determine comparative patterns of diversification. Moreover, no study conducted thus far has estimated divergence dates among all carnivoran families, which is an important requirement in the attempt to understand the patterns and tempo of diversification in this group. In this study, we have investigated the phylogenetic relationships among carnivoran families, and performed molecular dating analyses of the inferred nodes. We assembled a molecular supermatrix containing 14 genes (7765 bp), most of which have not been previously used in supra-familial carnivoran phylogenetics, for 50 different genera representing all carnivoran families. Analysis of this data set led to consistent and robust resolution of all supra-familial nodes in the carnivoran tree, and allowed the construction of a molecular timescale for the evolution of this mammalian order.

journal_name

Mol Phylogenet Evol

journal_title

Molecular phylogenetics and evolution

authors

Eizirik E,Murphy WJ,Koepfli KP,Johnson WE,Dragoo JW,Wayne RK,O'Brien SJ

doi

10.1016/j.ympev.2010.01.033

subject

Has Abstract

pub_date

2010-07-01 00:00:00

pages

49-63

issue

1

eissn

1055-7903

issn

1095-9513

pii

S1055-7903(10)00044-8

journal_volume

56

pub_type

杂志文章

相关文献

MOLECULAR PHYLOGENETICS AND EVOLUTION文献大全
  • Evolution around the Red Sea: Systematics and biogeography of the agamid genus Pseudotrapelus (Squamata: Agamidae) from North Africa and Arabia.

    abstract：:Since the Oligocene, regions adjacent to the Red Sea have experienced major environmental changes, from tectonic movements and continuous geological activity to shifting climatic conditions. The effect of these events on the distribution and diversity of the regional biota is still poorly understood. Agamid members of...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.12.021

    authors： Tamar K,Scholz S,Crochet PA,Geniez P,Meiri S,Schmitz A,Wilms T,Carranza S

    更新日期：2016-04-01 00:00:00

  • Multi-locus fossil-calibrated phylogeny, biogeography and a subgeneric revision of the Margaritiferidae (Mollusca: Bivalvia: Unionoida).

    abstract：:The taxonomy and biogeographic history of the bivalve family Margaritiferidae are controversial because previous molecular studies did not provide a well-resolved phylogenetic framework for these enigmatic freshwater mussels that have extensive but disjunct distribution in North America, Eurasia and North Africa. In t...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.07.020

    authors： Bolotov IN,Vikhrev IV,Bespalaya YV,Gofarov MY,Kondakov AV,Konopleva ES,Bolotov NN,Lyubas AA

    更新日期：2016-10-01 00:00:00

  • Molecular phylogeny of Banza (Orthoptera: Tettigoniidae), the endemic katydids of the Hawaiian Archipelago.

    abstract：:The extant endemic katydids (Orthoptera: Tettigoniidae) of the Hawaiian Archipelago include one to three species per high island and a single species on Nihoa, all currently placed in the genus Banza. These acoustic insects provide an excellent opportunity for investigating the evolution of reproductive isolation and ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2006.04.006

    authors： Shapiro LH,Strazanac JS,Roderick GK

    更新日期：2006-10-01 00:00:00

  • Molecular phylogenetics of the Brazilian giant bromeliads (Alcantarea, Bromeliaceae): implications for morphological evolution and biogeography.

    abstract：:The genus Alcantarea comprises near 30 species endemic to rocky outcrops from eastern Brazil. Most species are ornamental and several are threatened due to habitat loss and over collection. In this paper we examine the phylogenetics of Alcantarea and its relationship with the Brazilian members of Vriesea, a genus of w...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2012.03.015

    authors： Versieux LM,Barbará T,Wanderley Md,Calvente A,Fay MF,Lexer C

    更新日期：2012-07-01 00:00:00

  • Integrative inference of population history in the Ibero-Maghrebian endemic Pleurodeles waltl (Salamandridae).

    abstract：:Inference of population histories from the molecular signatures of past demographic processes is challenging, but recent methodological advances in species distribution models and their integration in time-calibrated phylogeographic studies allow detailed reconstruction of complex biogeographic scenarios. We apply an ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2017.04.022

    authors： Gutiérrez-Rodríguez J,Barbosa AM,Martínez-Solano Í

    更新日期：2017-07-01 00:00:00

  • Phylogenetic relationships of Mesoamerican spider monkeys (Ateles geoffroyi): Molecular evidence suggests the need for a revised taxonomy.

    abstract：:Mesoamerican spider monkeys (Ateles geoffroyi sensu lato) are widely distributed from Mexico to northern Colombia. This group of primates includes many allopatric forms with morphologically distinct pelage color and patterning, but its taxonomy and phylogenetic history are poorly understood. We explored the genetic re...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.08.025

    authors： Morales-Jimenez AL,Cortés-Ortiz L,Di Fiore A

    更新日期：2015-01-01 00:00:00

  • Molecular phylogeny of New World Myotis (Chiroptera, Vespertilionidae) inferred from mitochondrial and nuclear DNA genes.

    abstract：:Recent studies have shown that species in the genus Myotis have evolved a number of convergent morphological traits, many of which are more related to their mode of food procurement than to their phylogeny. Surprisingly, the biogeographic origins of these species are a much better predictor of phylogenetic relationshi...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2006.06.019

    authors： Stadelmann B,Lin LK,Kunz TH,Ruedi M

    更新日期：2007-04-01 00:00:00

  • Isolation of Hox and Parahox genes in the hemichordate Ptychodera flava and the evolution of deuterostome Hox genes.

    abstract：:Because of their importance for proper development of the bilaterian embryo, Hox genes have taken center stage for investigations into the evolution of bilaterian metazoans. Taxonomic surveys of major protostome taxa have shown that Hox genes are also excellent phylogenetic markers, as specific Hox genes are restricte...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2003.10.007

    authors： Peterson KJ

    更新日期：2004-06-01 00:00:00

  • Molecular systematics and biodiversity of oniscidean isopods in the groundwater calcretes of central Western Australia.

    abstract：:Groundwater calcrete aquifers of central Western Australia have been shown to contain a high diversity of stygobiont (subterranean aquatic) invertebrates, with each species confined to an individual calcrete and the entire system resembling a 'subterranean archipelago' containing hundreds of isolated calcretes. Here, ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.07.026

    authors： Javidkar M,Cooper SJB,King RA,Humphreys WF,Bertozzi T,Stevens MI,Austin AD

    更新日期：2016-11-01 00:00:00

  • Surviving the Messinian Salinity Crisis? Divergence patterns in the genus Dendropoma (Gastropoda: Vermetidae) in the Mediterranean Sea.

    abstract：:Four genetically distinct clades were recently described under the name Dendropoma petraeum, a Mediterranean endemic vermetid gastropod. The aim of this work is to date the processes that drove to the diversification within this taxon and to relate them to the corresponding historical events occurred in the Mediterran...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.05.004

    authors： Calvo M,Alda F,Oliverio M,Templado J,Machordom A

    更新日期：2015-10-01 00:00:00

  • Genetic variation, pseudocryptic diversity, and phylogeny of Erpobdella (Annelida: Hirudinida: Erpobdelliformes), with emphasis on Canadian species.

    abstract：:Leeches of the family Erpobdellidae are important members of benthic freshwater environments, where they are voracious predators of other invertebrates and an important source of nutrition for several species of vertebrates. Beset by a lack of reliable diagnostic morphological characters and destructive identification...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2019.106688

    authors： Anderson K,Braoudakis G,Kvist S

    更新日期：2020-02-01 00:00:00

  • Incomplete sterols and hopanoids pathways in ciliates: gene loss and acquisition during evolution as a source of biosynthetic genes.

    abstract：:Polycyclic triterpenoids, such as sterols and hopanoids, are essential components of plasmatic membrane in eukaryotic organisms. Although it is generally assumed that ciliates do not synthesize sterols, and many of them are indeed auxotrophic, a large set of annotated genomic sequences and experimental data from recen...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章,评审

    doi：10.1016/j.ympev.2014.01.026

    authors： Tomazic ML,Poklepovich TJ,Nudel CB,Nusblat AD

    更新日期：2014-05-01 00:00:00

  • Mitochondrial and nuclear multilocus phylogeny of Rhipicephalus ticks from Kenya.

    abstract：:The morphological diversity of African ticks of the genus Rhipicephalus and subgenus Boophilus have been studied in detail. However, their taxonomy remains poorly resolved with limited molecular studies performed to improve inter-species discrimination. Herein, ribosomal cytochrome c oxidase I (COI), 12S ribosomal DNA...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2019.106579

    authors： Kanduma EG,Bishop RP,Githaka NW,Skilton RA,Heyne H,Mwacharo JM

    更新日期：2019-11-01 00:00:00

  • Multiple origins of colonial green flagellates from unicells: evidence from molecular and organismal characters.

    abstract：:Phylogenetic hypotheses generated from cladistic analysis of organismal and molecular data are shown to be generally congruent and/or complementary for comparisons of unicellular and colonial green algae in the Chlorophyceae. Cladistic analysis of organismal character data corroborates the alliance of colonial Stephan...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.1994.1039

    authors： Buchheim MA,McAuley MA,Zimmer EA,Theriot EC,Chapman RL

    更新日期：1994-12-01 00:00:00

  • Phylogenetic analysis of Blattabacterium, endosymbiotic bacteria from the wood roach, Cryptocercus (Blattodea: Cryptocercidae), including a description of three new species.

    abstract：:Members of the cockroach genus Cryptocercus are wood-feeding, subsocial insects that live in temperate forests of the Nearctic and Palaearctic. At present, nine species are recognized: Cryptocercus relictus and Cryptocercus kyebangensis in eastern Asia and Russia, Cryptocercus primarius and Cryptocercus matilei in sou...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/s1055-7903(02)00330-5

    authors： Clark JW,Kambhampati S

    更新日期：2003-01-01 00:00:00

  • Untangling the influences of unmodeled evolutionary processes on phylogenetic signal in a forensically important HIV-1 transmission cluster.

    abstract：:Stochastic models of sequence evolution have been developed to reflect many biologically important processes, allowing for accurate phylogenetic reconstruction when an appropriate model is selected. However, commonly used models do not incorporate several potentially important biological processes. Spurious phylogenet...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.02.022

    authors： Doyle VP,Andersen JJ,Nelson BJ,Metzker ML,Brown JM

    更新日期：2014-06-01 00:00:00

  • Molecular phylogeny of a cosmopolitan group of woodpeckers (genus Picoides) gased on COI and cyt b mitochondrial gene sequences.

    abstract：:Picoides is the largest genus of woodpeckers and member species are found on most major land masses. Current systematic arrangement of this group, based on morphological, behavioral, and plumage characters, suggests that New World species evolved from a single invasion by a Eurasian common ancestor and that all New Wo...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.2001.1010

    authors： Weibel AC,Moore WS

    更新日期：2002-01-01 00:00:00

  • Phylogenetic relationships of the endosymbionts of mealybugs (Homoptera: Pseudococcidae) based on 16S rDNA sequences.

    abstract：:A portion of the gene coding for the 16S ribosomal RNA from the endosymbionts of three species of mealybugs [Pseudococcus longispinus (Targioni-Tozzetti), Pseudococcus maritimus (Ehrhorn), and Dysmicoccus neobrevipes (Beardsley)] was cloned, sequenced, and compared to a homologous fragment from bacteria representative...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/1055-7903(92)90032-c

    authors： Munson MA,Baumann P,Moran NA

    更新日期：1992-03-01 00:00:00

  • World-wide species distributions in the family Kyphosidae (Teleostei: Perciformes).

    abstract：:Sea chubs of the family Kyphosidae are major consumers of macroalgae on both temperate and tropical reefs, where they can comprise a significant proportion of fish biomass. However, the relationships and taxonomic status of sea chubs (including the junior synonyms Hermosilla, Kyphosus, Neoscorpis and Sectator) worldwi...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.04.037

    authors： Knudsen SW,Clements KD

    更新日期：2016-08-01 00:00:00

  • Cryptic speciation and limited hybridization within Lumbricus earthworms (Clitellata: Lumbricidae).

    abstract：:Cryptic mitochondrial (mt) lineages are known to exist in the earthworm morphospecies Lumbricus rubellus and L. terrestris. The latter was recently split into two species, L. terrestris and L. herculeus, based on large genetic distances and a statistical difference in body size. There is support for the separation of ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2016.09.011

    authors： Martinsson S,Erséus C

    更新日期：2017-01-01 00:00:00

  • Evolutionary history of freshwater sculpins, genus Cottus (Teleostei; Cottidae) and related taxa, as inferred from mitochondrial DNA phylogeny.

    abstract：:The freshwater sculpins, genus Cottus (Teleostei; Cottidae), comprise bottom-dwelling fishes that exhibit various life-history styles, having radiated throughout Northern Hemisphere freshwater habitats. The phylogenetic relationships among Cottus and related taxa were estimated from mitochondrial DNA 12S rRNA and cont...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2005.06.004

    authors： Yokoyama R,Goto A

    更新日期：2005-09-01 00:00:00

  • Phylogeography of the Galápagos hawk (Buteo galapagoensis): a recent arrival to the Galápagos Islands.

    abstract：:Galápagos hawks (Buteo galapagoensis) are one of the most inbred bird species in the world, living in small, isolated island populations. We used mitochondrial sequence and nuclear minisatellite data to describe relationships among Galápagos hawk populations and their colonization history. We sampled 10 populations (e...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2005.11.014

    authors： Bollmer JL,Kimball RT,Whiteman NK,Sarasola JH,Parker PG

    更新日期：2006-04-01 00:00:00

  • Molecular phylogenetics of the Peromyscus boylii species group (Rodentia: muridae) based on mitochondrial cytochrome b sequences.

    abstract：:Variation in the mitochondrial cytochrome b gene (1143 bp) was examined to estimate the phylogenetic relationships of taxa within the Peromyscus boylii species group. In addition, phylogenetic relationships among the aztecus, boylii, and truei species groups were addressed. Maximum-likelihood, neighbor-joining, and ma...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.2000.0806

    authors： Tiemann-Boege I,Kilpatrick CW,Schmidly DJ,Bradley RD

    更新日期：2000-09-01 00:00:00

  • Phylogeny and biogeography of Alangiaceae (Cornales) inferred from DNA sequences, morphology, and fossils.

    abstract：:Alangiaceae, in the basal Asterid clade Cornales, consists of only one genus, Alangium. The genus has approximately 24 species distributed mainly in tropical and subtropical regions of the Old World and is well represented in the Tertiary fossil record of the northern hemisphere. We conducted phylogenetic and biogeogr...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.01.017

    authors： Feng CM,Manchester SR,Xiang QY

    更新日期：2009-05-01 00:00:00

  • Mucin CYS domains are ancient and highly conserved modules that evolved in concert.

    abstract：BACKGROUND:Many large secreted gel-forming mucins contain multiple copies of a "naked" cysteine-enriched domain (CYS domain) that interrupt or are adjacent to mucin domains (Ser/Thr/Pro regions). There is less similarity of homologous CYS sequences between species than there is across CYS repeats within species. These ...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2009.03.035

    authors： Desseyn JL

    更新日期：2009-08-01 00:00:00

  • Diversification patterns in cosmopolitan earthworms: similar mode but different tempo.

    abstract：:Comparative phylogeography of widespread species that span the same geographic areas can elucidate the influence of historical events on current patterns of biodiversity, identify patterns of co-vicariance, and therefore aid the understanding of general evolutionary processes. Soil-dwelling animals present characteris...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2015.07.017

    authors： Fernández R,Novo M,Marchán DF,Díaz Cosín DJ

    更新日期：2016-01-01 00:00:00

  • Analyzing the functional divergence of Slo1 and Slo3 channel subfamilies.

    abstract：:Slo1 and Slo3 encode close paralogues of the Slo potassium (K+) channels family. Despite their evolutionary relatedness, Slo1 and Slo3 channels show marked functional differences and evolutionary dynamics. Whereas Slo1 is a highly conserved and widely expressed channel, Slo3 is a rapidly evolving channel restricted to...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2018.12.026

    authors： Vicens A,Vinuesa P,Arenas M,Treviño CL

    更新日期：2019-04-01 00:00:00

  • The evolutionary jigsaw puzzle of the surviving trout (Salmo trutta L. complex) diversity in the Italian region. A multilocus Bayesian approach.

    abstract：:Mediterranean trout populations display a diversity of phenotypes, representing a valuable model for the study of adaptation and a puzzling dilemma for taxonomists and biogeographers, which is further entangled by the widespread introgression of allochthonous genes. In this paper we analysed DNA polymorphism at multip...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2014.06.022

    authors： Gratton P,Allegrucci G,Sbordoni V,Gandolfi A

    更新日期：2014-10-01 00:00:00

  • Phylogenetic analysis provides insights into the evolution of Asian fireflies and adult bioluminescence.

    abstract：:Fireflies are one of the best-known examples of luminescent organisms. The limited geographic distribution and rarity of some firefly genera have hindered molecular phylogenetic analysis, resulting in uncertainty in regard to firefly phylogeny. Here, using genome skimming next-generation sequencing, we sequenced 23 As...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1016/j.ympev.2019.106600

    authors： Chen X,Dong Z,Liu G,He J,Zhao R,Wang W,Peng Y,Li X

    更新日期：2019-11-01 00:00:00

  • Why nuclear ribosomal DNA spacers (ITS) tell different stories in Quercus.

    abstract：:The molecular systematics of Quercus (Fagaceae) was recently assessed by two teams using independently generated ITS sequences. Although the results disagreed in several remarkable features, the phylogenetic trees for either hypothesis were highly supported by bootstrap resampling. We have reanalyzed the ITS sequences...

    journal_title：Molecular phylogenetics and evolution

    pub_type： 杂志文章

    doi：10.1006/mpev.2001.0934

    authors： Mayol M,Rosselló JA

    更新日期：2001-05-01 00:00:00