听力与言语-语言病理学

行为科学

医学伦理学

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  • Persistent Infection of Simian Foamy Virus Derived from the Japanese Macaque Leads to the High-Level Expression of microRNA that Resembles the miR-1 microRNA Precursor Family.

    abstract::MicroRNAs (miRNAs) are a group of small non-coding RNAs that suppress the expression of target mRNAs. The seed sequence of miRNA plays a crucial role in recognizing the 3'-untranslated region of the target mRNA. Cells infected with a simian foamy virus (SFV) isolated from an African green monkey (Chlorocebus aethiops)...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19130

    authors: Hashimoto-Gotoh A,Kitao K,Miyazawa T

    更新日期:2020-01-01 00:00:00

  • Distinct Community Composition of Previously Uncharacterized Denitrifying Bacteria and Fungi across Different Land-Use Types.

    abstract::Recent studies demonstrated that phylogenetically more diverse and abundant bacteria and fungi than previously considered are responsible for denitrification in terrestrial environments. We herein examined the effects of land-use types on the community composition of those denitrifying microbes based on their nitrite ...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19064

    authors: Fujimura R,Azegami Y,Wei W,Kakuta H,Shiratori Y,Ohte N,Senoo K,Otsuka S,Isobe K

    更新日期:2020-01-01 00:00:00

  • Levels of Periplasmic Nitrate Reductase during Denitrification are Lower in Bradyrhizobium japonicum than in Bradyrhizobium diazoefficiens.

    abstract::Soybean plants host endosymbiotic dinitrogen (N2)-fixing bacteria from the genus Bradyrhizobium. Under oxygen-limiting conditions, Bradyrhizobium diazoefficiens and Bradyrhizobium japonicum perform denitrification by sequentially reducing nitrate (NO3-) to nitrous oxide (N2O) or N2. The anaerobic reduction of NO3- to ...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19129

    authors: Siqueira AF,Sugawara M,Arashida H,Minamisawa K,Sánchez C

    更新日期:2020-01-01 00:00:00

  • Type III Secretion System of Bradyrhizobium sp. SUTN9-2 Obstructs Symbiosis with Lotus spp.

    abstract::The rhizobial type III secretion system secretes effector proteins into host plant cells, which may either promote or inhibit symbiosis with legumes. We herein demonstrated that the type III secretion system of Bradyrhizobium sp. SUTN9-2 obstructed symbiosis with Lotus japonicus Miyakojima, L. japonicus Gifu, and Lotu...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME20041

    authors: Hashimoto S,Goto K,Pyromyou P,Songwattana P,Greetatorn T,Tittabutr P,Boonkerd N,Teaumroong N,Uchiumi T

    更新日期:2020-01-01 00:00:00

  • Transition of the Bacterial Community and Culturable Chitinolytic Bacteria in Chitin-treated Upland Soil: From Streptomyces to Methionine-auxotrophic Lysobacter and Other Genera.

    abstract::Chitin amendment is an agricultural management strategy for controlling soil-borne plant disease. We previously reported an exponential decrease in chitin added to incubated upland soil. We herein investigated the transition of the bacterial community structure in chitin-degrading soil samples over time and the charac...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19070

    authors: Iwasaki Y,Ichino T,Saito A

    更新日期:2020-01-01 00:00:00

  • Impact of Atrazine Exposure on the Microbial Community Structure in a Brazilian Tropical Latosol Soil.

    abstract::Atrazine is a triazine herbicide that is widely used to control broadleaf weeds. Its widespread use over the last 50 years has led to the potential contamination of soils, groundwater, rivers, and lakes. Its main route of complete degradation is via biological means, which is carried out by soil microbiota using a 6-s...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19143

    authors: Fernandes AFT,Wang P,Staley C,Aparecida Silva Moretto J,Miguel Altarugio L,Chagas Campanharo S,Guedes Stehling E,Jay Sadowsky M

    更新日期:2020-01-01 00:00:00

  • Size Matters: Ultra-small and Filterable Microorganisms in the Environment.

    abstract::Ultra-small microorganisms are ubiquitous in Earth's environments. Ultramicrobacteria, which are defined as having a cell volume of <0.1 μm3, are often numerically dominant in aqueous environments. Cultivated representatives among these bacteria, such as members of the marine SAR11 clade (e.g., "Candidatus Pelagibacte...

    journal_title:Microbes and environments

    pub_type: 杂志文章,评审

    doi:10.1264/jsme2.ME20025

    authors: Nakai R

    更新日期:2020-01-01 00:00:00

  • Enzymatic Degradation of p-Nitrophenyl Esters, Polyethylene Terephthalate, Cutin, and Suberin by Sub1, a Suberinase Encoded by the Plant Pathogen Streptomyces scabies.

    abstract::The genome of Streptomyces scabies, the predominant causal agent of potato common scab, encodes a potential cutinase, the protein Sub1, which was previously shown to be specifically induced in the presence of suberin. The sub1 gene was expressed in Escherichia coli and the recombinant protein Sub1 was purified and cha...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19086

    authors: Jabloune R,Khalil M,Ben Moussa IE,Simao-Beaunoir AM,Lerat S,Brzezinski R,Beaulieu C

    更新日期:2020-01-01 00:00:00

  • Homocitrate Synthase Genes of Two Wide-Host-Range Bradyrhizobium Strains are Differently Required for Symbiosis Depending on Host Plants.

    abstract::The nifV gene encodes homocitrate synthase, the enzyme that catalyzes the formation of homocitrate, which is essential for arranging the FeMo-cofactor in the catalytic center of nitrogenase. Some host plants, such as Lotus japonicus, supply homocitrate to their symbionts, in this case, Mesorhizobium loti, which lacks ...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19078

    authors: Hashimoto S,Wongdee J,Songwattana P,Greetatorn T,Goto K,Tittabutr P,Boonkerd N,Teaumroong N,Uchiumi T

    更新日期:2019-12-27 00:00:00

  • PCR-denaturing Gradient Gel Electrophoresis as a Simple Identification Tool of Arbuscular Mycorrhizal Fungal Isolates.

    abstract::Due to their obligate symbiotic nature and lack of long-term storage methods, the strain collection of arbuscular mycorrhizal (AM) fungi requires periodic proliferation using a pot culture with host plants. Therefore, a method to evaluate the purity of proliferated AM fungal cultures is critical for the quality contro...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19074

    authors: Ohtomo R,Oka N,Morimoto S

    更新日期:2019-12-27 00:00:00

  • The Earth Is Small for "Leviathans": Long Distance Dispersal of Giant Viruses across Aquatic Environments.

    abstract::Giant viruses of 'Megaviridae' have the ability to widely disperse around the globe. We herein examined 'Megaviridae' communities in four distinct aquatic environments (coastal and offshore seawater, brackish water, and hot spring freshwater), which are distantly located from each other (between 74 and 1,765 km), usin...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME19037

    authors: Li Y,Endo H,Gotoh Y,Watai H,Ogawa N,Blanc-Mathieu R,Yoshida T,Ogata H

    更新日期:2019-09-25 00:00:00

  • Genetic and Physiological Characteristics of a Novel Marine Propylene-Assimilating Halieaceae Bacterium Isolated from Seawater and the Diversity of Its Alkene and Epoxide Metabolism Genes.

    abstract::The Gram-negative marine propylene-assimilating bacterium, strain PE-TB08W, was isolated from surface seawater. A structural gene analysis using the 16S rRNA gene showed 96, 94, and 95% similarities to Halioglobus species, Haliea sp. ETY-M, and Haliea sp. ETY-NAG, respectively. A phylogenetic tree analysis showed that...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18053

    authors: Suzuki T,Yazawa T,Morishita N,Maruyama A,Fuse H

    更新日期:2019-03-30 00:00:00

  • Nitric Oxide Production from Nitrite Reduction and Hydroxylamine Oxidation by Copper-containing Dissimilatory Nitrite Reductase (NirK) from the Aerobic Ammonia-oxidizing Archaeon, Nitrososphaera viennensis.

    abstract::Aerobic ammonia-oxidizing archaea (AOA) play a crucial role in the global nitrogen cycle by oxidizing ammonia to nitrite, and nitric oxide (NO) is a key intermediate in AOA for sustaining aerobic ammonia oxidation activity. We herein heterologously expressed the NO-forming, copper-containing, dissimilatory nitrite red...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18058

    authors: Kobayashi S,Hira D,Yoshida K,Toyofuku M,Shida Y,Ogasawara W,Yamaguchi T,Araki N,Oshiki M

    更新日期:2018-12-28 00:00:00

  • Phylogenetic Diversity of Nitrogenase Reductase Genes and Possible Nitrogen-Fixing Bacteria in Thermophilic Chemosynthetic Microbial Communities in Nakabusa Hot Springs.

    abstract::Chemosynthetic microbial communities develop and form dense cell aggregates in slightly alkaline sulfidic hot springs in the temperature range of 70-86°C at Nakabusa, Japan. Nitrogenase activity has recently been detected in the microbial communities collected. To identify possible members capable of nitrogen fixation...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18030

    authors: Nishihara A,Thiel V,Matsuura K,McGlynn SE,Haruta S

    更新日期:2018-12-28 00:00:00

  • Comparative Analysis of the Genetic Basis of Branched Nonylphenol Degradation by Sphingobium amiense DSM 16289T and Sphingobium cloacae JCM 10874T.

    abstract::Branched nonylphenol (BNP), a degradation product of nonylphenol polyethoxylates, exerts estrogenic effects on various organisms. The genes underlying BNP degradation by Sphingobium amiense DSM 16289T were analyzed by complete genome sequencing and compared with those of the versatile BNP-degrading Sphingobium cloacae...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18077

    authors: Ootsuka M,Nishizawa T,Hasegawa M,Kurusu Y,Ohta H

    更新日期:2018-12-28 00:00:00

  • Comparing Two Common DNA Extraction Kits for the Characterization of Symbiotic Microbial Communities from Ascidian Tissue.

    abstract::Various DNA extraction methods are often used interchangeably for the characterization of microbial communities despite indications that different techniques produce disparate results. The microbiomes of two ascidian species were herein characterized using two common DNA extraction kits, the DNeasy Blood and Tissue Ki...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18031

    authors: Evans JS,López-Legentil S,Erwin PM

    更新日期:2018-12-28 00:00:00

  • Biofilm Formation and Degradation of Commercially Available Biodegradable Plastic Films by Bacterial Consortiums in Freshwater Environments.

    abstract::We investigated biofilm formation on biodegradable plastics in freshwater samples. Poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) (PHBH) was covered by a biofilm after an incubation in freshwater samples. A next generation sequencing analysis of the bacterial communities of biofilms that formed on PHBH films revealed t...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18033

    authors: Morohoshi T,Oi T,Aiso H,Suzuki T,Okura T,Sato S

    更新日期:2018-09-29 00:00:00

  • Molecular Detection of Eukaryotic Diets and Gut Mycobiomes in Two Marine Sediment-Dwelling Worms, Sipunculus nudus and Urechis unicinctus.

    abstract::The present study aimed to reveal the eukaryotic diets of two economically important marine sediment-inhabiting worms, Sipunculus nudus (peanut worm) and Urechis unicinctus (spoon worm), using clone libraries and phylogenetic analyses of 18S rRNA genes. Fungal rDNA was also targeted and analyzed to reveal mycobiomes. ...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME18065

    authors: Wang Y,Shi T,Huang G,Gong J

    更新日期:2018-09-29 00:00:00

  • Distinct Microbial Community Performing Dissimilatory Nitrate Reduction to Ammonium (DNRA) in a High C/NO3- Reactor.

    abstract::A dissimilatory nitrate reduction to ammonium (DNRA) microbial community was developed under a high organic carbon to nitrate (C/NO3-) ratio in an anoxic semi-continuous sequencing batch reactor (SBR) fed with glucose as the source of carbon and NO3- as the electron acceptor. Activated sludge collected from a municipa...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME17193

    authors: Chutivisut P,Isobe K,Powtongsook S,Pungrasmi W,Kurisu F

    更新日期:2018-09-29 00:00:00

  • Complexity of Antibiotic Resistance in Commensal Escherichia coli Derived from Pigs from an Intensive-Production Farm.

    abstract::Antibiotics in animal husbandry are used to maintain welfare, but lead to the generation of resistant strains. We analyzed commensal multidrug-resistant Escherichia coli from pigs at the beginning and end of the production cycle in a farm with a farrow-to-finish system in order to investigate whether clonal spread or ...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME17041

    authors: Mazurek J,Bok E,Baldy-Chudzik K

    更新日期:2018-09-29 00:00:00

  • Diarrhea-Associated Intestinal Microbiota in Captive Sichuan Golden Snub-Nosed Monkeys (Rhinopithecus roxellana).

    abstract::Diarrhea is often associated with marked alterations in the intestinal microbiota, termed dysbiosis; however, limited information is currently available on the intestinal microbiota in captive golden snub-nosed monkeys (Rhinopithecus roxellana) with diarrhea. We herein characterized the fecal microbiota in diarrhea an...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME17163

    authors: Zhu H,Zeng D,Wang Q,Wang N,Zeng B,Niu L,Ni X

    更新日期:2018-09-29 00:00:00

  • Flow Cytometry for Rapid Enumeration and Biomass Quantification of Thraustochytrids in Coastal Seawaters.

    abstract::Marine fungus-like eukaryotic unicellular protists (thraustochytrids) are considered to play an important role in the marine microbial food web. However, their abundance, distribution, and relative biomass in coastal waters have not yet been examined in detail. By using a flow cytometry method (FCM) for the rapid enum...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME17162

    authors: Duan Y,Sen B,Xie N,Paterson JS,Chen Z,Wang G

    更新日期:2018-07-04 00:00:00

  • Esteya Vermicola, a Nematophagous Fungus Attacking the Pine Wood Nematode, Harbors a Bacterial Endosymbiont Affiliated with Gammaproteobacteria.

    abstract::Symbioses have played pivotal roles in biological, ecological, and evolutionary diversification. Symbiotic bacteria affect the biology of hosts in a number of ways. Esteya vermicola, an endoparasitic nematophagous fungus, has high infectivity in the pine wood nematode (PWN), which causes devastating ecological damage ...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16167

    authors: Wang R,Dong L,Chen Y,Qu L,Wang Q,Zhang Y

    更新日期:2017-09-27 00:00:00

  • Spatiotemporal Dynamics of Total Viable Vibrio spp. in a NW Mediterranean Coastal Area.

    abstract::A cellular approach combining Direct Viable Counting and Fluorescent In Situ Hybridization using a one-step multiple-probe technique and Solid Phase Cytometry (DVC-FISH-SPC) was developed to monitor total viable vibrios and cover the detection of a large diversity of vibrios. FISH combined three probes in the same ass...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME17028

    authors: Girard L,Peuchet S,Servais P,Henry A,Charni-Ben-Tabassi N,Baudart J

    更新日期:2017-09-27 00:00:00

  • Biocontrol Potential of an Endophytic Streptomyces sp. Strain MBCN152-1 against Alternaria brassicicola on Cabbage Plug Seedlings.

    abstract::In the present study, 77 strains of endophytic actinomycetes isolated from cabbage were screened in order to assess their biocontrol potential against Alternaria brassicicola on cabbage seedlings. In the first and second screening trials, cabbage seedlings pretreated with mycelial suspensions of each isolate were spra...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME17014

    authors: Hassan N,Nakasuji S,Elsharkawy MM,Naznin HA,Kubota M,Ketta H,Shimizu M

    更新日期:2017-06-24 00:00:00

  • Effect of Flooding and the nosZ Gene in Bradyrhizobia on Bradyrhizobial Community Structure in the Soil.

    abstract::We investigated the effects of the water status (flooded or non-flooded) and presence of the nosZ gene in bradyrhizobia on the bradyrhizobial community structure in a factorial experiment that examined three temperature levels (20°C, 25°C, and 30°C) and two soil types (andosol and gray lowland soil) using microcosm in...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16132

    authors: Saeki Y,Nakamura M,Mason MLT,Yano T,Shiro S,Sameshima-Saito R,Itakura M,Minamisawa K,Yamamoto A

    更新日期:2017-06-24 00:00:00

  • Discovery and Complete Genome Sequence of a Bacteriophage from an Obligate Intracellular Symbiont of a Cellulolytic Protist in the Termite Gut.

    abstract::Termites depend nutritionally on their gut microbes, and protistan, bacterial, and archaeal gut communities have been extensively studied. However, limited information is available on viruses in the termite gut. We herein report the complete genome sequence (99,517 bp) of a phage obtained during a genome analysis of "...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16175

    authors: Pramono AK,Kuwahara H,Itoh T,Toyoda A,Yamada A,Hongoh Y

    更新日期:2017-06-24 00:00:00

  • Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan.

    abstract::In order to understand the relationships between understory bamboo and soil properties, we compared microbial community structures in the soil of a Betula ermanii boreal forest with Sasa kurilensis present and removed using high-throughput DNA sequencing. The presence of understory S. kurilensis strongly affected soil...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16154

    authors: Kong B,Chen L,Kasahara Y,Sumida A,Ono K,Wild J,Nagatake A,Hatano R,Hara T

    更新日期:2017-06-24 00:00:00

  • Physical, Chemical and Proteomic Evidence of Potato Suberin Degradation by the Plant Pathogenic Bacterium Streptomyces scabiei.

    abstract::Potato peels consist of a tissue called phellem, which is formed by suberized cell layers. The degradation of suberin, a lipidic and recalcitrant polymer, is an ecological process attributed to soil fungal populations; however, previous studies have suggested that Streptomyces scabiei, the causal agent of potato commo...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16110

    authors: Beaulieu C,Sidibé A,Jabloune R,Simao-Beaunoir AM,Lerat S,Monga E,Bernards MA

    更新日期:2016-12-23 00:00:00

  • Diversity of Methane-Oxidizing Bacteria in Soils from "Hot Lands of Medolla" (Italy) Featured by Anomalous High-Temperatures and Biogenic CO2 Emission.

    abstract::"Terre Calde di Medolla" (TCM) (literally, "Hot Lands of Medolla") refers to a farming area in Italy with anomalously high temperatures and diffuse emissions of biogenic CO2, which has been linked to CH4 oxidation processes from a depth of 0.7 m to the surface. We herein assessed the composition of the total bacterial...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16087

    authors: Cappelletti M,Ghezzi D,Zannoni D,Capaccioni B,Fedi S

    更新日期:2016-12-23 00:00:00

  • Morphological and Taxonomic Properties of Tokyovirus, the First Marseilleviridae Member Isolated from Japan.

    abstract::Members of the Marseilleviridae family are large DNA viruses with icosahedral particle structures that infect Acanthamoeba cells. The first Marseillevirus to be discovered was isolated in 2009. Since then, several other members of the Marseilleviridae family have been reported, including Lausannevirus, Senegalvirus, C...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16107

    authors: Takemura M

    更新日期:2016-12-23 00:00:00

  • Effect of Elevated CO2 Concentration, Elevated Temperature and No Nitrogen Fertilization on Methanogenic Archaeal and Methane-Oxidizing Bacterial Community Structures in Paddy Soil.

    abstract::Elevated concentrations of atmospheric CO2 ([CO2]) enhance the production and emission of methane in paddy fields. In the present study, the effects of elevated [CO2], elevated temperature (ET), and no nitrogen fertilization (LN) on methanogenic archaeal and methane-oxidizing bacterial community structures in a free-a...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME16066

    authors: Liu D,Tago K,Hayatsu M,Tokida T,Sakai H,Nakamura H,Usui Y,Hasegawa T,Asakawa S

    更新日期:2016-09-29 00:00:00

  • Biogeochemical Cycle of Methanol in Anoxic Deep-Sea Sediments.

    abstract::The biological flux and lifetime of methanol in anoxic marine sediments are largely unknown. We herein reported, for the first time, quantitative methanol removal rates in subsurface sediments. Anaerobic incubation experiments with radiotracers showed high rates of microbial methanol consumption. Notably, methanol oxi...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME15204

    authors: Yanagawa K,Tani A,Yamamoto N,Hachikubo A,Kano A,Matsumoto R,Suzuki Y

    更新日期:2016-06-25 00:00:00

  • D-Amino Acid Catabolism Is Common Among Soil-Dwelling Bacteria.

    abstract::Soil and rhizosphere environments were examined in order to determine the identity and relative abundance of bacteria that catabolize d- and l-amino acids as the sole source of carbon and nitrogen. All substrates were readily catabolized by bacteria from both environments, with most d-amino acids giving similar CFU co...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME15126

    authors: Radkov AD,McNeill K,Uda K,Moe LA

    更新日期:2016-06-25 00:00:00

  • Diversity, Community Composition and Abundance of Anammox Bacteria in Sediments of the North Marginal Seas of China.

    abstract::Over the past few decades, anammox bacteria have been recognized as key players that contribute significantly to the release of large amounts of nitrogen in the global marine nitrogen cycle. In the present study, the diversity, community composition, and abundance of anammox bacteria from the sediments of four diverse...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME15140

    authors: Shehzad A,Liu J,Yu M,Qismat S,Liu J,Zhang XH

    更新日期:2016-06-25 00:00:00

  • Cellular Response of Sinorhizobium sp. Strain A2 during Arsenite Oxidation.

    abstract::Arsenic (As) is a widely distributed toxic element in the environment and microorganisms have developed resistance mechanisms in order to tolerate it. The cellular response of the chemoorganotrophic arsenite (As[III])-oxidizing α-Proteobacteria, Sinorhizobium sp. strain A2, to arsenic was examined in the present study...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME15096

    authors: Fukushima K,Huang H,Hamamura N

    更新日期:2015-01-01 00:00:00

  • Distribution and evolution of nitrogen fixation genes in the phylum Bacteroidetes.

    abstract::Diazotrophs had not previously been identified among bacterial species in the phylum Bacteroidetes until the rapid expansion of bacterial genome sequences, which revealed the presence of nitrogen fixation (nif) genes in this phylum. We herein determined the draft genome sequences of Bacteroides graminisolvens JCM 1509...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME14142

    authors: Inoue J,Oshima K,Suda W,Sakamoto M,Iino T,Noda S,Hongoh Y,Hattori M,Ohkuma M

    更新日期:2015-01-01 00:00:00

  • Bacterial Community Composition in Oligosaline Lake Bosten: Low Overlap of Betaproteobacteria and Bacteroidetes with Freshwater Ecosystems.

    abstract::Oligosaline lakes in arid regions provide indispensable water resources for humans; however, information on the bacterial community composition (BCC) of this ecosystem is limited. In the present study, we explored seasonal and vertical variations in BCC in Lake Bosten, a unique oligosaline lake (1.2‰ salinity) in arid...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME14177

    authors: Tang X,Xie G,Shao K,Dai J,Chen Y,Xu Q,Gao G

    更新日期:2015-01-01 00:00:00

  • Identification and Detection of Prokaryotic Symbionts in the Ciliate Metopus from Anaerobic Granular Sludge.

    abstract::The aim of the present study was to investigate the prokaryotic community structure of the anaerobic ciliate, Metopus sp. using rRNA sequencing, fluorescence in situ hybridization (FISH), and transmission electron microscopy (TEM). Metopus sp. was physically separated from anaerobic granular sludge in a domestic waste...

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.ME15154

    authors: Hirakata Y,Oshiki M,Kuroda K,Hatamoto M,Kubota K,Yamaguchi T,Harada H,Araki N

    更新日期:2015-01-01 00:00:00

  • Application of Locked Nucleic Acid (LNA) oligonucleotide-PCR clamping technique to selectively PCR amplify the SSU rRNA genes of bacteria in investigating the plant-associated community structures.

    abstract::The simultaneous extraction of plant organelle (mitochondria and plastid) genes during the DNA extraction step is a major limitation in investigating the community structures of bacteria associated with plants because organelle SSU rRNA genes are easily amplified by PCR using primer sets that are specific to bacteria....

    journal_title:Microbes and environments

    pub_type: 杂志文章

    doi:10.1264/jsme2.me14061

    authors: Ikenaga M,Sakai M

    更新日期:2014-09-17 00:00:00

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