Specific requirements for cytochrome c-550 and the manganese-stabilizing protein in photoautotrophic strains of Synechocystis sp. PCC 6803 with mutations in the domain Gly-351 to Thr-436 of the chlorophyll-binding protein CP47.

Abstract:

:The requirement of cytochrome c-550 (PSII-V) in photosystem II (PSII) has been assessed in Synechocystis sp. PCC 6803 containing mutations between Gly-351 and Thr-436 of the loop E domain of the chlorophyll a-binding protein CP47. Six photoautotrophic strains were utilized to compare the effect of removal of either the manganese-stabilizing protein (PSII-O) or PSII-V on PSII activity in vivo. These were a wild-type control; two strains with amino acid deletions, Delta(R384-V392) and Delta(G429-T436); and three carrying specific amino acid substitutions, G351L/T365Q, G351L/E364Q/T365Q, and G351L/E353Q/E355Q/T365Q. The removal of PSII-O prevented the assembly of PSII in Delta(G429-T436) but not in Delta(R384-V392). Neither Delta(G429-T436) nor Delta(R384-V392) could support photoautotrophic growth in the absence of PSII-V. In chloride-limiting conditions, the photoautotrophic growth of Delta(R384-V392) was severely impaired and that of Delta(G429-T436) totally inhibited, and no strains lacking PSII-V could grow in chloride-limiting or calcium-limiting media. Substitutions at Gly-351, Glu-353, Glu-355, and Thr-365 produced phenotypes that were similar to those of the control in the presence or absence of PSII-O and PSII-V, but removal of PSII-O from G351L/E364Q/T365Q produced a significant reduction of assembled PSII centers and an enhanced sensitivity to photoinactivation while removal of PSII-V prevented photoautotrophic growth. The additional mutants E364Q:DeltaPSII-V and E364G:DeltaPSII-V demonstrated that this inhibition was a consequence of the mutation at Glu-364. These results also show that the removal of PSII-V, in vivo, produces phenotypes in the CP47 mutants examined that are either similar or more severe than those resulting from the removal of PSII-O.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Morgan TR,Shand JA,Clarke SM,Eaton-Rye JJ

doi

10.1021/bi980404s

subject

Has Abstract

pub_date

1998-10-13 00:00:00

pages

14437-49

issue

41

eissn

0006-2960

issn

1520-4995

pii

bi980404s

journal_volume

37

pub_type

杂志文章
  • Structure of the bovine elastin gene and S1 nuclease analysis of alternative splicing of elastin mRNA in the bovine nuchal ligament.

    abstract::Genomic clones encompassing all the translated sequences, the 3' untranslated sequence, and 1 kb flanking the ATG translation initiation codon of bovine tropoelastin have been obtained and characterized by restriction enzyme analysis and extensive DNA sequencing. These analyses demonstrated that functionally distinct ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00432a003

    authors: Yeh H,Anderson N,Ornstein-Goldstein N,Bashir MM,Rosenbloom JC,Abrams W,Indik Z,Yoon K,Parks W,Mecham R

    更新日期:1989-03-21 00:00:00

  • The alpha-helical domain of liver fatty acid binding protein is responsible for the diffusion-mediated transfer of fatty acids to phospholipid membranes.

    abstract::Intestinal fatty acid binding protein (IFABP) and liver FABP (LFABP), homologous proteins expressed at high levels in intestinal absorptive cells, employ markedly different mechanisms for the transfer of fatty acids (FAs) to acceptor membranes. Transfer from IFABP occurs during protein-membrane collisional interaction...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0357356

    authors: Córsico B,Liou HL,Storch J

    更新日期:2004-03-30 00:00:00

  • The divalent cation is obligatory for the binding of ligands to the catalytic site of secreted phospholipase A2.

    abstract::The divalent cation requirement for partial reactions of the catalytic turnover cycle during interfacial catalysis by pig pancreatic phospholipase A2 (PLA2) is investigated. Results show that the specific role of calcium in all the events of the catalytic cycle at the active site is not shared by other divalent cation...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00076a024

    authors: Yu BZ,Berg OG,Jain MK

    更新日期:1993-06-29 00:00:00

  • Physical and functional interactions of Caenorhabditis elegans WRN-1 helicase with RPA-1.

    abstract::The Caenorhabditis elegans Werner syndrome protein, WRN-1, a member of the RecQ helicase family, has a 3'-5' DNA helicase activity. Worms with defective wrn-1 exhibit premature aging phenotypes and an increased level of genome instability. In response to DNA damage, WRN-1 participates in the initial stages of checkpoi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200791p

    authors: Hyun M,Park S,Kim E,Kim DH,Lee SJ,Koo HS,Seo YS,Ahn B

    更新日期:2012-02-21 00:00:00

  • A proton nuclear magnetic resonance study of the quaternary structure of human homoglobins in water.

    abstract::Proton nuclear magnetic resonance spectra of human hemoglobins in water reveal several exchangeable protons which are indicators of the quaternary structures of both the liganded and unliganded molecules. A comparison of the spectra of normal human adult hemoglobin with those of mutant hemoglobins Chesapeake (FG4alpha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00682a036

    authors: Fung LW,Ho C

    更新日期:1975-06-03 00:00:00

  • Engineering of the nonspecific phospholipase C from Bacillus cereus: replacement of glutamic acid-4 by alanine results in loss of interfacial catalysis and enhanced phosphomonoesterase activity.

    abstract::The nonspecific phospholipase C from Bacillus cereus is a zinc metalloenzyme that catalyzes the hydrolysis of phospholipids to yield diacylglycerol and a phosphate monoester. Glu-4 has been proposed as a potential candidate for the general base in the hydrolysis reaction and was shown to interact with the substrate he...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972751s

    authors: Tan CA,Roberts MF

    更新日期:1998-03-24 00:00:00

  • Effect of H+ on the K+ activation of adenosine-5'-monophosphate aminohydrolase.

    abstract::The activation of adenosine-5'-monophosphate aminohydrolase from rabbit skeletal muscle by H+ has been demonstrated. Evidence is presented which indicates that the binding of H+ and K+ is linked, in that the dissociation constant (KA) for K+ activation is reduced as the pH is lowered. Concomitantly, the pK of several ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00641a013

    authors: Campbell JC,Suelter CH

    更新日期:1977-11-01 00:00:00

  • Effects of guanidine hydrochloride on the proton inventory of proteins: implications on interpretations of protein stability.

    abstract::The DeltaG degrees (N)(-)(D) value obtained from extrapolation to zero denaturant concentration by the linear extrapolation method (LEM) is commonly interpreted to represent the Gibbs energy difference between native (N) and denatured (D) ensembles at the limit of zero denaturant concentration. For DeltaG degrees (N)(...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001071d

    authors: Bolen DW,Yang M

    更新日期:2000-12-12 00:00:00

  • Purification, characterization, and fibrinogen cleavage sites of three fibrinolytic enzymes from the venom of Crotalus basiliscus basiliscus.

    abstract::Three distinct fibrinolytic enzymes have been purified from the venom of Crotalus basiliscus basiliscus (the Mexican west coast rattlesnake). The high-performance liquid chromatography-based purification comprised the following steps: (a) hydrophobic interaction chromatography; (b) hydroxylapatite chromatography; (c) ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00134a003

    authors: Retzios AD,Markland FS Jr

    更新日期:1992-05-19 00:00:00

  • Identifying the lowest electronic states of the chlorophylls in the CP47 core antenna protein of photosystem II.

    abstract::CP47 is a pigment-protein complex in the core of photosystem II that tranfers excitation energy to the reaction center. Here we report on a spectroscopic investigation of the isolated CP47 complex. By deconvoluting the 77 K absorption and linear dichroism, red-most states at 683 and 690 nm have been identified with os...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0261948

    authors: De Weerd FL,Palacios MA,Andrizhiyevskaya EG,Dekker JP,Van Grondelle R

    更新日期:2002-12-24 00:00:00

  • Functional reconstitution of the olfactory membrane: incorporation of the olfactory adenylate cyclase in liposomes.

    abstract::Chemosensory cilia isolated from the olfactory epithelium of Rana catesbeiana were solubilized with Lubrol PX in the presence of supplementary lipid, forskolin, and sodium fluoride. Subsequent removal of the detergent by adsorption onto Biobeads SM2 results in the formation of proteoliposomes that display forskolin- a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00417a040

    authors: Anholt RR

    更新日期:1988-08-23 00:00:00

  • T4 RNA Ligase joins 2'-deoxyribonucleoside 3',5'-bisphosphates to oligodeoxyribonucleotides.

    abstract::T4 RNA ligase catalyzes the ATP-dependent addition of a single 2'-deoxyribonucleoside 3',5'-bisphosphate to the 3'-hydroxyl of an oligodeoxyribonucleotide. The bisphosphate is joined to the deoxyoligomer by a 3' leads to 5' phosphodiester bond and the product, which is terminated by a 3'-phosphate, is one nucleotide l...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00617a004

    authors: Hinton DM,Baez JA,Gumport RI

    更新日期:1978-11-28 00:00:00

  • Influence of heme-surrounding amino acid residues on the manganese (V)-nitrido bond in manganese-substituted hemoproteins: resonance Raman evidence for porphyrin core expansion and reduction of the manganese(V)-nitrido stretching force constant.

    abstract::Nitridomanganese(V) protoporphyrin IX was prepared by hypochlorite oxidation of the corresponding manganese(III) protoporphyrin IX derivative in the presence of ammonium ion and by photolysis of the corresponding azidomanganese(III) complex. Myoglobin and horseradish peroxidase containing this novel protoporphyrin der...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00390a015

    authors: Tsubaki M,Hori H,Hotta T,Hiwatashi A,Ichikawa Y,Yu NT

    更新日期:1987-08-11 00:00:00

  • Thermal stability of calmodulin and mutants studied by (1)H-(15)N HSQC NMR measurements of selectively labeled [(15)N]Ile proteins.

    abstract::Calmodulin, the Ca(2+)-dependent activator of many cellular processes, contains two well-defined structural domains, each of which binds two Ca(2+) ions. In its Ca(2+)-free (apo) form, it provides an attractive model for studying mechanisms of protein unfolding, exhibiting two separable, reversible processes, indicati...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi012187s

    authors: Biekofsky RR,Martin SR,McCormick JE,Masino L,Fefeu S,Bayley PM,Feeney J

    更新日期:2002-05-28 00:00:00

  • Involvement of serine 96 in the catalytic mechanism of ferredoxin-NADP+ reductase: structure--function relationship as studied by site-directed mutagenesis and X-ray crystallography.

    abstract::The crystal structure of ferredoxin-NADP+ reductase (FNR) suggests that Ser96 is directly involved in hydride transfer between the isoalloxazine moiety of FAD and the nicotinamide ring of NADP(H). To probe its role, Ser96 has been mutated to valine (S96V) and glycine (S96G). These mutations primarily affected the inte...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00026a019

    authors: Aliverti A,Bruns CM,Pandini VE,Karplus PA,Vanoni MA,Curti B,Zanetti G

    更新日期:1995-07-04 00:00:00

  • Catalysis of thiol/disulfide exchange: single-turnover reduction of protein disulfide-isomerase by glutathione and catalysis of peptide disulfide reduction.

    abstract::Protein disulfide-isomerase, a protein localized to the lumen of the endoplasmic reticulum of eukaryotic cells, catalyzes the posttranslational formation and rearrangement of protein disulfide bonds. As isolated from bovine liver, the enzyme contains 0.8 free sulfhydryl group per mole of protein monomer and 3.1 disulf...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00444a023

    authors: Gilbert HF

    更新日期:1989-09-05 00:00:00

  • Induction of conductance heterogeneity in gramicidin channels.

    abstract::In previous work from our laboratory, 5-10% of the channels formed by [Val1]gramicidin A have conductances that fall outside the narrow range that conventionally has defined the standard gramicidin channel [e.g., see Russell et al. (1986) Biophys. J. 49, 673]. Reports from other laboratories, however, show that up to ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00442a007

    authors: Sawyer DB,Koeppe RE 2nd,Andersen OS

    更新日期:1989-08-08 00:00:00

  • Mapping the functional domains of elongation factor-2 kinase.

    abstract::A new class of eukaryotic protein kinases that are not homologous to members of the serine/threonine/tyrosine protein kinase superfamily was recently identified [Futey, L. M., et al. (1995) J. Biol. Chem. 270, 523-529; Ryazanov, A. G., et al. (1997) Proc. Natl. Acad. Sci. U.S.A. 94, 4884-4889]. This class includes euk...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0007270

    authors: Pavur KS,Petrov AN,Ryazanov AG

    更新日期:2000-10-10 00:00:00

  • Regulation of phenylalanine hydroxylase: conformational changes upon phenylalanine binding detected by hydrogen/deuterium exchange and mass spectrometry.

    abstract::Phenylalanine acts as an allosteric activator of the tetrahydropterin-dependent enzyme phenylalanine hydroxylase. Hydrogen/deuterium exchange monitored by mass spectrometry has been used to gain insight into local conformational changes accompanying activation of rat phenylalanine hydroxylase by phenylalanine. Peptide...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1001294

    authors: Li J,Dangott LJ,Fitzpatrick PF

    更新日期:2010-04-20 00:00:00

  • Interaction of protein kinase C isozymes with Rho GTPases.

    abstract::Evidence is provided for direct protein-protein interactions between protein kinase C (PKC) alpha, betaI, betaII, gamma, delta, epsilon, and zeta and members of the Rho family of small GTPases. Previous investigations, based on the immunoprecipitation approach, have provided evidence consistent with a direct interacti...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001654n

    authors: Slater SJ,Seiz JL,Stagliano BA,Stubbs CD

    更新日期:2001-04-10 00:00:00

  • Presence of divalent cation is not mandatory for the formation of intramolecular purine-motif triplex containing human c-jun protooncogene target.

    abstract::Modulation of endogenous gene function, through sequence-specific recognition of double helical DNA via oligonucleotide-directed triplex formation, is a promising approach. Compared to the formation of pyrimidine motif triplexes, which require relatively low pH, purine motif appears to be the most gifted for their sta...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1012589

    authors: Kaushik S,Kaushik M,Svinarchuk F,Malvy C,Fermandjian S,Kukreti S

    更新日期:2011-05-17 00:00:00

  • Covalent structure of collagen: amino acid sequence of alpha 1(III)-CB9 from type III collagen of human liver.

    abstract::The peptide alpha 1(III)-CB9 was prepared and purified from human liver, and its amino acid sequence was determined. Automated Edman degradation of the intact peptide and peptides derived from selective cleavage with hydroxylamine and digestions with trypsin, thermolysin, and Staph V8 protease enabled determination of...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00512a040

    authors: Seyer JM,Kang AH

    更新日期:1981-04-28 00:00:00

  • Product Release Mechanism Associated with Structural Changes in Monomeric l-Threonine 3-Dehydrogenase.

    abstract::A short chain dehydrogenase like l-threonine 3-dehydrogenase (SDR-TDH) from metagenome data (mtTDH) was identified by database mining. Its enzymatic properties suggested that mtTDH has unique characteristics relative to other SDR-TDHs, including two mesophilic and thermophilic SDR-TDHs identified in this study. The ac...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00832

    authors: Motoyama T,Nakano S,Yamamoto Y,Tokiwa H,Asano Y,Ito S

    更新日期:2017-10-31 00:00:00

  • A protein dissection study of a molten globule.

    abstract::Proteins have many distinct tertiary folds (Richardson, J. S. (1981) Adv. Prot. Chem. 34, 167-339). The term tertiary fold refers to the spatial organization of secondary structure elements (alpha-helices and beta-strands). It is not known when, in the process of protein folding, a native tertiary fold emerges. Here, ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00174a021

    authors: Peng ZY,Kim PS

    更新日期:1994-03-01 00:00:00

  • Reaction of cytochrome c2 with photosynthetic reaction centers from Rhodopseudomonas viridis.

    abstract::The reactions of Rhodopseudomonas viridis cytochrome c2 and horse cytochrome c with Rps. viridis photosynthetic reaction centers were studied by using both single- and double-flash excitation. Single-flash excitation of the reaction centers resulted in rapid photooxidation of cytochrome c-556 in the cytochrome subunit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00219a021

    authors: Knaff DB,Willie A,Long JE,Kriauciunas A,Durham B,Millett F

    更新日期:1991-02-05 00:00:00

  • A convenient gHMQC-based NMR assay for investigating ammonia channeling in glutamine-dependent amidotransferases: studies of Escherichia coli asparagine synthetase B.

    abstract::X-ray crystal structures of glutamine-dependent amidotransferases in their "active" conformation have revealed the existence of multiple active sites linked by solvent inaccessible intramolecular channels, giving rise to the widely accepted view that ammonia released in a glutaminase site is channeled efficiently into...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi700145t

    authors: Li KK,Beeson WT 4th,Ghiviriga I,Richards NG

    更新日期:2007-04-24 00:00:00

  • Oxidation-reduction properties of compounds I and II of Arthromyces ramosus peroxidase.

    abstract::At neutral pH, compound I of Arthromyces ramosus peroxidase (ARP) was stable and was reduced to ferric ARP without apparent formation of compound II upon titration with ascorbate or hydroquinone. In the titration experiments, compound II was seen as an intermediate only at alkaline pH. However, measuring a difference ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00184a038

    authors: Farhangrazi ZS,Copeland BR,Nakayama T,Amachi T,Yamazaki I,Powers LS

    更新日期:1994-05-10 00:00:00

  • The transcription regulator RcoM-2 from Burkholderia xenovorans is a cysteine-ligated hemoprotein that undergoes a redox-mediated ligand switch.

    abstract::Spectroscopic characterization of the newly discovered heme-PAS domain sensor protein BxRcoM-2 reveals that this protein undergoes redox-dependent ligand switching and CO- and NO-induced ligand displacement. The aerobic bacterium Burkholderia xenovorans expresses two homologous heme-containing proteins that promote CO...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800486x

    authors: Marvin KA,Kerby RL,Youn H,Roberts GP,Burstyn JN

    更新日期:2008-08-26 00:00:00

  • The energy landscape of 3-deoxy-D-manno-octulosonate 8-phosphate synthase.

    abstract::3-Deoxy-d-manno-octulosonate 8-phosphate (KDO8P) synthase catalyzes the condensation of arabinose 5-phosphate (A5P) and phosphoenolpyruvate (PEP) to form KDO8P, a key precursor in the biosynthesis of the endotoxin of Gram-negative bacteria. Earlier studies have established that the condensation occurs with a syn addit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi901341h

    authors: Tao P,Gatti DL,Schlegel HB

    更新日期:2009-12-15 00:00:00

  • High resolution proton nuclear magnetic resonance investigation of the structural and dynamic properties of d(C15A15)-d(T15G15).

    abstract::The high resolution proton nuclear magnetic resonance (NMR) spectra of the synthetic DNA block polymer d(C15A15)-d(T15G15) were studied in order to more completely understand telestability in DNA, and to provide fundamental NMR data on DNA helices and random coils. Spectra were measured in the spectral region from 0 t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00622a031

    authors: Early TA,Kearns DR,Burd JF,Larson JE,Wells RD

    更新日期:1977-02-08 00:00:00