The CD39-like gene family: identification of three new human members (CD39L2, CD39L3, and CD39L4), their murine homologues, and a member of the gene family from Drosophila melanogaster.

Abstract:

:The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD39L1 has been shown to have E-type ecto-ATPase activity, by hydrolyzing extracellular ATP. We have characterized three novel CD39-like transcripts, CD39L2, CD39L3, and CD39L4, which share extensive amino acid homology with other nucleotide triphosphatases in vertebrates, invertebrates, and plants, suggesting that these genes also encode proteins with ecto-nucleotidase activity. Isolation and sequencing of full-length cDNA clones for each gene identified putative proteins of 485, 529, and 429 amino acids. The expression pattern of all five human members of the gene family was analyzed. CD39L2, CD39L3, and CD39L4 were mapped on the human genome, and the murine homologues identified with the putative map locations were assigned on the basis of regions of conserved gene order between human and mouse chromosomes. The map location of mcd39l4 places the gene within a region associated with audiogenic seizure susceptibility in mouse. This disorder is characterized by convulsions induced by loud high-frequency sound and has been shown to be associated with increased nucleotide triphosphatase activity.

journal_name

Genomics

journal_title

Genomics

authors

Chadwick BP,Frischauf AM

doi

10.1006/geno.1998.5317

subject

Has Abstract

pub_date

1998-06-15 00:00:00

pages

357-67

issue

3

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(98)95317-4

journal_volume

50

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • The MAS proto-oncogene is imprinted in human breast tissue.

    abstract::The human MAS proto-oncogene is situated at 6q25.3-q26, a region that is homologous to mouse chromosome 17 where two parentally imprinted genes (Mas and Igf2r) have previously been identified. We investigated the imprinting status of MAS in adult lesions to establish the imprinting status of this gene in humans, as ce...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.5063

    authors: Miller N,McCann AH,O'Connell D,Pedersen IS,Spiers V,Gorey T,Dervan PA

    更新日期:1997-12-15 00:00:00

  • Identification of new translocation breakpoints at 12q13 in lipomas.

    abstract::Cytogenetic studies of banded chromosomes and fluorescence in situ hybridization (FISH) of several yeast artificial chromosomes (YACs) that are part of a 128-kb resolution physical map of a portion of 12q13 revealed that 4/14 (28%) lipomas have breakpoints in 12q13. These breakpoints are more than 10 Mb away from the ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4993

    authors: Merscher S,Marondel I,Pedeutour F,Gaudray P,Kucherlapati R,Turc-Carel C

    更新日期:1997-11-15 00:00:00

  • Tissue-specific expression and mapping of the Cox7ah gene in mouse.

    abstract::We have isolated and examined the gene for the heart isoform of cytochrome c oxidase subunit VIIa (COX VIIa-H) in mouse, an isoform gene previously thought to be lacking in rodents. Interspecies amino acid comparisons indicate that mouse COX VIIa-H protein displays 82.5 and 70.9% identity with the bovine and human hea...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5279

    authors: Jaradat SA,Ko MS,Grossman LI

    更新日期:1998-05-01 00:00:00

  • The effect of 5-fluorouracil/leucovorin chemotherapy on CpG methylation, or the confounding role of leukocyte heterogeneity: An illustration.

    abstract::Blood-based epigenome-wide association studies that aim at comparing CpG methylation between colorectal cancer (CRC) patients and controls can lead to the discovery of diagnostic or prognostic biomarkers. Numerous confounders can lead to spurious associations. We aimed to see if 5-fluorouracil (5-FU)/leucovorin chemot...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2015.09.003

    authors: Lemire M,Zaidi SH,Zanke BW,Gallinger S,Hudson TJ,Cleary SP

    更新日期:2015-12-01 00:00:00

  • Human retinal guanylate cyclase (GUC2D) maps to chromosome 17p13.1.

    abstract::3',5'-Cyclic guanosine monophosphate is the intracellular second messenger regulating phototransduction in mammals. The level of cGMP in photoreceptor cells is controlled by the cGMP-hydrolyzing enzyme cGMP phosphodiesterase and the cGMP-producing enzyme guanylate cyclase. Identification of a photoreceptor-specific gu...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1415

    authors: Oliveira L,Miniou P,Viegas-Pequignot E,Rozet JM,Dollfus H,Pittler SJ

    更新日期:1994-07-15 00:00:00

  • The human microbiome: a hot spot of microbial horizontal gene transfer.

    abstract::The human body harbors numerous microbes, and here exists a close relationship between microbes and human health. The Human Microbiome Project has generated whole genome sequences of several hundred human microbes. In this study, we identified horizontal gene transfer (HGT) events in human microbes and tried to elucid...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2012.07.012

    authors: Liu L,Chen X,Skogerbø G,Zhang P,Chen R,He S,Huang DW

    更新日期:2012-11-01 00:00:00

  • Chromosomal localization of seven members of the murine TGF-beta superfamily suggests close linkage to several morphogenetic mutant loci.

    abstract::Chromosomal locations have been assigned to seven members of the TGF-beta superfamily using an interspecific mouse backcross. Probes for the Tgfb-1, -2, and -3, Bmp-2a and -3, and Vgr-1 genes recognized only single loci, whereas the Bmp-2b probe recognized two independently segregating loci (designated Bmp-2b1 and Bmp...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90480-i

    authors: Dickinson ME,Kobrin MS,Silan CM,Kingsley DM,Justice MJ,Miller DA,Ceci JD,Lock LF,Lee A,Buchberg AM

    更新日期:1990-03-01 00:00:00

  • Molecular cloning and characterization of NEU4, the fourth member of the human sialidase gene family.

    abstract::Several mammalian sialidases have been cloned so far and here we describe the identification and expression of a new member of the human sialidase gene family. The NEU4 gene, identified by searching sequence databases for entries showing homologies to the human cytosolic sialidase NEU2, maps in 2q37 and encodes a 484-...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2003.08.019

    authors: Monti E,Bassi MT,Bresciani R,Civini S,Croci GL,Papini N,Riboni M,Zanchetti G,Ballabio A,Preti A,Tettamanti G,Venerando B,Borsani G

    更新日期:2004-03-01 00:00:00

  • Novel human esophagus-specific gene c1orf10: cDNA cloning, gene structure, and frequent loss of expression in esophageal cancer.

    abstract::We have identified a novel human gene, designated C1orf10, using modified differential display PCR. The C1orf10 gene, which spans 5 kb in length, is composed of three exons. The deduced protein contains 495 amino acids with one transmembrane domain. The amino acid sequence of C1orf10 is characterized by the presence o...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6344

    authors: Xu Z,Wang MR,Xu X,Cai Y,Han YL,Wu KM,Wang J,Chen BS,Wang XQ,Wu M

    更新日期:2000-11-01 00:00:00

  • Physical and genetic maps for chromosome 10.

    abstract::A fluorescence in situ hybridization (FISH) physical map of 14 polymorphic loci on chromosome 10 covers over 62% of the fractional length of chromosome 10. The positions of three previously mapped loci are confirmed, nine more are refined, and two new loci are cytogenetically mapped. The order of loci determined by FI...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1192

    authors: Lichter JB,Difilippantonio MJ,Pakstis AJ,Goodfellow PJ,Ward DC,Kidd KK

    更新日期:1993-05-01 00:00:00

  • Relationship of the genes for Chediak-Higashi syndrome (beige) and the T-cell receptor gamma chain in mouse and man.

    abstract::The genetic linkage of Chediak-Higashi syndrome and its murine analog, beige (bg), to the T-cell receptor (TCR-gamma) gamma chain gene is further defined. Previous studies using recombinant inbred strains of mice demonstrated that the murine bg gene is genetically linked to a murine TCR-gamma gene. We report that in t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(87)90058-9

    authors: Holcombe RF,Strauss W,Owen FL,Boxer LA,Warren RW,Conley ME,Ferrara J,Leavitt RY,Fauci AS,Taylor BA

    更新日期:1987-11-01 00:00:00

  • Imprinted control regions include composite DNA elements consisting of the ZFP57 binding site overlapping MLL1 morphemes.

    abstract::Mammalian genomes include DNA segments that are imprinted (CpG-methylated) only on one of the two parental chromosomes, leading to parent-of-origin-specific gene expression. The process is regulated by Imprinting Control Regions (ICRs) and germline Differentially Methylated Regions (gDMRs). Previously, ZFP57 was shown...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2017.04.008

    authors: Bina M

    更新日期:2017-07-01 00:00:00

  • DNA sequence analysis of human chromosome 21 notI linking clones.

    abstract::Portions of 16 chromosome 21 NotI linking clones were sequenced. These linking clone sequences represent sequence-tagged restriction sites that are potentially useful for finding genes and for finer genome mapping and sequencing. All of the clones were G+C rich (54 to 83%). CpG and GpC dinucleotide frequencies were ve...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1455

    authors: Zhu Y,Cantor CR,Smith CL

    更新日期:1993-11-01 00:00:00

  • Molecular characterization of Beckwith-Wiedemann syndrome (BWS) patients with partial duplication of chromosome 11p excludes the gene MYOD1 from the BWS region.

    abstract::The molecular characterization of two patients with features of Beckwith-Wiedemann syndrome (BWS) and chromosome abnormalities is consistent with the association of this phenotype with a duplication of a portion of chromosome 11. Quantitative Southern blot analysis of DNA from patient A defines a large inherited dupli...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90256-t

    authors: Weksberg R,Glaves M,Teshima I,Waziri M,Patil S,Williams BR

    更新日期:1990-12-01 00:00:00

  • A 1-Mb physical map and PAC contig of the imprinted domain in 11p15.5 that contains TAPA1 and the BWSCR1/WT2 region.

    abstract::We have constructed a 1-Mb contig in human chromosomal band 11p15.5, a region implicated in the etiology of several embryonal tumors, including Wilms tumor, and in Beckwith-Wiedemann syndrome. Cosmid, P1, PAC, and BAC clones were characterized by NotI/SalI digestion and hybridized to a variety of probes to generate a ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4826

    authors: Reid LH,Davies C,Cooper PR,Crider-Miller SJ,Sait SN,Nowak NJ,Evans G,Stanbridge EJ,deJong P,Shows TB,Weissman BE,Higgins MJ

    更新日期:1997-08-01 00:00:00

  • Comprehensive repertoire and phylogenetic analysis of the G protein-coupled receptors in human and mouse.

    abstract::Understanding differences in the repertoire of orthologous gene pairs is vital for interpretation of pharmacological and physiological experiments if conclusions are conveyed between species. Here we present a comprehensive dataset for G protein-coupled receptors (GPCRs) in both human and mouse with a phylogenetic roa...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2006.04.001

    authors: Bjarnadóttir TK,Gloriam DE,Hellstrand SH,Kristiansson H,Fredriksson R,Schiöth HB

    更新日期:2006-09-01 00:00:00

  • A map of the distal region of the long arm of human chromosome 21 constructed by radiation hybrid mapping and pulsed-field gel electrophoresis.

    abstract::We have used radiation hybrid (RH) mapping and pulsed-field gel electrophoresis (PFGE) to determine the order and positions of 28 DNA markers from the distal region of the long arm of human chromosome 21. The maps generated by these two methods are in good agreement. This study, combined with that of D. R. Cox et al. ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90216-2

    authors: Burmeister M,Kim S,Price ER,de Lange T,Tantravahi U,Myers RM,Cox DR

    更新日期:1991-01-01 00:00:00

  • Analysis of exon/intron structure and 400 kb of genomic sequence surrounding the 5'-promoter and 3'-terminal ends of the human glypican 3 (GPC3) gene.

    abstract::GPC3, the gene modified in the Simpson-Golabi-Behmel gigantism/overgrowth syndrome (SGBS), is shown to span more than 500 kb of genomic sequence, with the transcript beginning 197 bp 5' of the translational start site. The Xq26.1 region containing GPC3 as the only known gene has been extended to > 900 kb by sequence a...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4916

    authors: Huber R,Crisponi L,Mazzarella R,Chen CN,Su Y,Shizuya H,Chen EY,Cao A,Pilia G

    更新日期:1997-10-01 00:00:00

  • Comparative radiation hybrid map of canine chromosome 1 incorporating SNP and indel polymorphisms.

    abstract::We report a comparative map of canine chromosome 1 (CFA1) incorporating single nucleotide polymorphisms (SNPs) and insertion/deletion (indel) polymorphisms, developed by using cross-species primers, radiation hybrid analysis, and pool-and-sequence identification of genetic variations. Fifty-five genes were chosen with...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2004.04.001

    authors: Housley DJ,Ritzert E,Venta PJ

    更新日期:2004-08-01 00:00:00

  • The gene for the alpha-subunit of retinal rod transducin is on mouse chromosome 9.

    abstract::Mice carrying the autosomal recessive rd gene experience total degeneration of the photoreceptor cells of the retina by 3 to 4 weeks of life. Biochemical studies of the rd retina have demonstrated a lesion in cyclic guanosine monophosphate (cGMP) metabolism due to depressed rod-specific cGMP-phosphodiesterase (cGMP-PD...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90303-0

    authors: Danciger M,Kozak CA,Farber DB

    更新日期:1989-02-01 00:00:00

  • Single-strand conformational polymorphism (SSCP) mapping of the mouse genome: integration of the SSCP, microsatellite, and gene maps of mouse chromosome 1.

    abstract::Interspersed repetitive sequence (IRS) PCR and repetitive element-to-bubble (IRS-bubble) PCR have been utilized to rapidly generate large numbers of mouse-specific, chromosome 1-enriched STSs from mouse-hamster somatic cell hybrids. Single-strand conformational polymorphism (SSCP) has been used to localize 39 new repe...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(11)80007-8

    authors: Hunter KW,Watson ML,Rochelle J,Ontiveros S,Munroe D,Seldin MF,Housman DE

    更新日期:1993-12-01 00:00:00

  • Human indolethylamine N-methyltransferase: cDNA cloning and expression, gene cloning, and chromosomal localization.

    abstract::Indolethylamine N-methyltransferase (INMT) catalyzes the N-methylation of tryptamine and structurally related compounds. We recently cloned and characterized the rabbit INMT cDNA and gene as a step toward cloning the cDNA and gene for this enzyme in humans. We have now used a PCR-based approach to clone a human INMT c...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.5960

    authors: Thompson MA,Moon E,Kim UJ,Xu J,Siciliano MJ,Weinshilboum RM

    更新日期:1999-11-01 00:00:00

  • Genomic organization and genetic mapping of the neuroimmune gene I2rf5 to mouse chromosome 4.

    abstract::The nervous and immune systems share many functional and molecular similarities, including shared surface antigens, secretions of soluble factors, and cross-modulatory effects. We have identified previously a novel mRNA termed F5, which is expressed only in activated T lymphocytes and mature, postmitotic neurons. Tiss...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(95)80137-b

    authors: Autieri MV,Kozak CA,Cohen JA,Prystowsky MB

    更新日期:1995-01-01 00:00:00

  • Isolation and characterization of a rat delta-aminolevulinate dehydratase processed pseudogene.

    abstract::Southern blot analysis of genomic DNA from different strains of rat indicated that there were multiple copies of the gene encoding the second enzyme of the heme biosynthetic pathway, delta-aminolevulinate dehydratase (ALA-D). Two types of genomic clones were isolated from a Sprague-Dawley rat library. One appears to b...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90210-l

    authors: Bishop TR,Frelin LP,Boyer SH

    更新日期:1990-08-01 00:00:00

  • Genome-wide effects of DNA methyltransferase inhibitor on gene expression in double-stranded RNA transfected porcine PK15 cells.

    abstract::Double-stranded RNA (dsRNA) is produced in host cells during viral replication. The effects of DNA demethylation on gene expression in dsRNA transfected swine cells are unclear. The study aims to profile the transcriptome changes which are induced by DNA methyltransferase inhibitor (Aza-CdR) in porcine PK15 cells tran...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2013.10.005

    authors: Wang X,Ao H,Zhai L,Bai L,He W,Yu Y,Wang C

    更新日期:2014-05-01 00:00:00

  • Significant evidence for linkage of mite-sensitive childhood asthma to chromosome 5q31-q33 near the interleukin 12 B locus by a genome-wide search in Japanese families.

    abstract::Childhood-onset asthma is frequently found in association with atopy. Although asthmatic children may develop IgE antibodies against variety of allergens, asthma is associated primarily with allergy to house-dust mites, molds, or other allergens. In this study, we conducted a genome-wide linkage search in 47 Japanese ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6201

    authors: Yokouchi Y,Nukaga Y,Shibasaki M,Noguchi E,Kimura K,Ito S,Nishihara M,Yamakawa-Kobayashi K,Takeda K,Imoto N,Ichikawa K,Matsui A,Hamaguchi H,Arinami T

    更新日期:2000-06-01 00:00:00

  • Precise mapping of the brain alpha 2-adrenergic receptor gene within chromosome 4p16.

    abstract::The gene encoding the brain alpha 2-adrenergic receptor (ADRA2C) is located on human chromosome 4. It has been circumstantially associated with a number of human disorders, including Parkinson disease, panic disorders, and Huntington disease (HD). Using somatic cell hybrids, we localized the gene to chromosome 4p16 di...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1061

    authors: Riess O,Thies U,Siedlaczck I,Potisek S,Graham R,Theilmann J,Grimm T,Epplen JT,Hayden MR

    更新日期:1994-01-15 00:00:00

  • Analysis of expressed sequence tags from a fetal human heart cDNA library.

    abstract::Single-pass sequencing of randomly selected cDNA clones to generate expressed sequence tags (ESTs) has been widely used to identify novel genes and to study gene expression in a variety of tissues. We have generated 2244 ESTs from a human fetal heart library (GenBank Accession Nos. R30692-30774 and R56965-58824), whic...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.9874

    authors: Hwang DM,Fung YW,Wang RX,Laurenssen CM,Ng SH,Lam WY,Tsui KW,Fung KP,Waye M,Lee CY

    更新日期:1995-11-20 00:00:00

  • Genetic analysis of circulating tumor cells in pancreatic cancer patients: A pilot study.

    abstract:UNLABELLED:Pancreatic cancer is one of the most aggressive malignant tumors, mainly due to an aggressive metastasis spreading. In recent years, circulating tumor cells became associated to tumor metastasis. Little is known about their expression profiles. The aim of this study was to develop a complete workflow making ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2015.02.003

    authors: Görner K,Bachmann J,Holzhauer C,Kirchner R,Raba K,Fischer JC,Martignoni ME,Schiemann M,Alunni-Fabbroni M

    更新日期:2015-07-01 00:00:00

  • 1.5-Mb YAC contig in Xq28 formatted with sequence-tagged sites and including a region unstable in the clones.

    abstract::A contig of 20 yeast artificial clones (YACs) has been assembled across 1.5 Mb of Xq28 and formatted with nine previously reported probes and nine STSs developed from the sequence of probes and end fragments of YACs. YAC end fragments were obtained by subcloning, Alu-vector PCR, or primer-ligation PCR methods. Eightee...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1234

    authors: Palmieri G,Romano G,Casamassimi A,D'Urso M,Little RD,Abidi FE,Schlessinger D,Lagerström M,Malmgren H,Steen-Bondeson ML

    更新日期:1993-06-01 00:00:00