Abstract：
:In this survey of 5074 plant genes for their AUG context sequences, purines are present at the -3 and +4 positions in about 80% of the sequences. Although this observation is similar to the vertebrate consensus sequence, the number of plant mRNAs with purines at the -3 position is lower and at the +4 position is higher than reported for vertebrate mRNAs. Higher plants have an AC-rich consensus sequence. caA(A/C)aAUGGCg as a context of translation initiator codon. Between the two major groups of angiosperms, the context of the AUG codon in dicot mRNAs is aaA(A/C)aAUGGCu which is similar to the higher-plant consensus but monocot mRNAs have c(a/c)(A/G)(A/C)cAUGGCG as a consensus which exhibits an overall similarity with the vertebrate consensus. The experimental evidence regarding the importance of the AUG context in plants is discussed.
journal_name
Plant Mol Bioljournal_title
Plant molecular biologyauthors
Joshi CP,Zhou H,Huang X,Chiang VLdoi
10.1023/a:1005816823636subject
Has Abstractpub_date
1997-12-01 00:00:00pages
993-1001issue
6eissn
0167-4412issn
1573-5028journal_volume
35pub_type
杂志文章,评审abstract：:During flower development, pluripotent stem cells within the floral meristem give rise to proliferative precursor cells whose progeny eventually acquire specialized functions within each floral organ. The regulatory mechanisms by which plant cells transition from a proliferating state to a differentiated state are not...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-011-9844-3
更新日期：2012-02-01 00:00:00
abstract：:Considerable progress in tomato molecular biology has been made over the past five years. At least 19 different mRNAs which increase in amount during tomato fruit ripening have been cloned and genes for enzymes involved in cell wall degradation (polygalacturonase and pectinesterase) and ethylene synthesis (ACC synthas...
journal_title：Plant molecular biology
pub_type： 杂志文章,评审
doi：10.1007/BF00015607
更新日期：1992-05-01 00:00:00
abstract：:In Brassica, the S-locus glycoprotein (SLG) gene has been strongly implicated in the self-incompatibility reaction. Several alleles of this locus have been sequenced, and accordingly grouped as class I (corresponding to dominant S-alleles) and class II (recessive). We recently showed that a self-compatible (Sc) line o...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00037027
更新日期：1995-03-01 00:00:00
abstract：:Recent studies with dicot plants reveal that floral organ development is controlled by a group of regulatory factors containing the MADS domain. In this study, we have isolated and characterized a cDNA clone from rice, OsMADS1, which encodes a MADS-domain-containing protein. The OsMADS1 amino acid sequence shows 56.2%...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00013751
更新日期：1994-10-01 00:00:00
abstract：KEY MESSAGE:CmCAD2 and CmCAD3 function more positively than CmCAD1 in oriental melon for lignin synthesis which is important to ensure internal water status and thus for drought tolerance. Well-lignification may be the guarantee of efficient axial water transport and barrier of lateral water flow in oriental melon tole...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-020-01018-7
更新日期：2020-08-01 00:00:00
abstract：:Two dimensional gel electrophoresis was used to examine differences in steady state total poly(A) RNA from untransformed potato (Solanum tuberosum cv. Maris Bard) and potato transformed with shoot-inducing TL-DNA from A. tumefaciens. RNA was compared from phenotypically very distinct in vitro cultured shoots, more sim...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00015227
更新日期：1986-07-01 00:00:00
abstract：:Plant cell suspension cultures are invaluable models for the study of cellular processes. Here we develop the recently described Arabidopsis suspension culture MM2d as a transcript profiling platform by means of Affymetrix ATH1 microarrays. Analysis of gene expression profiles during normal culture growth, during sync...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1023/B:PLAN.0000019059.56489.ca
更新日期：2003-11-01 00:00:00
abstract：:Synthetic oligonucleotides corresponding to conserved regions of cysteine proteinases were used as primers in the RT-PCR amplification of a fragment of cDNA corresponding to a region of a cysteine proteinase gene expressed during germination of chickpea (cac for Cicer arietinum cysteine proteinase). The identity of th...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00023238
更新日期：1994-05-01 00:00:00
abstract：:A full-length cDNA encoding the 206 amino acid open reading frame of a trypsin/chymotrypsin inhibitor abundant in the corms of giant taro (Alocasia macrorrhiza) was isolated. An internal fragment was cloned using degenerate primers corresponding to a region of the mature protein sequence and the 'rapid amplification o...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00020813
更新日期：1996-03-01 00:00:00
abstract：:We report the isolation and characterisation of a wound-induced cDNA designated AoPR1 from a suspension of mesophyll cells that had been mechanically isolated from cladodes of light-grown Asparagus officinalis seedlings by grinding in a mortar and pestle. The transcript abundance is up-regulated following cell separat...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00026782
更新日期：1992-07-01 00:00:00
abstract：:We describe here the isolation and characterization of OsiSAP8, a member of stress Associated protein (SAP) gene family from rice characterized by the presence of A20 and AN1 type Zinc finger domains. OsiSAP8 is a multiple stress inducible gene, induced by various stresses, namely heat, cold, salt, desiccation, submer...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-007-9284-2
更新日期：2008-03-01 00:00:00
abstract：KEY MESSAGE:The design and use of existing VIGS vectors for revealing monocot gene functions are described and potential new vectors are discussed, which may expand their repertoire. Virus induced gene silencing (VIGS) is a method of transient gene silencing in plants, triggered by the use of modified viral vectors. VI...
journal_title：Plant molecular biology
pub_type： 杂志文章,评审
doi：10.1007/s11103-019-00854-6
更新日期：2019-05-01 00:00:00
abstract：:Hevea brasiliensis, being the only source of commercial natural rubber, is an extremely economically important crop. In an effort to facilitate biological, biochemical and molecular research in rubber biosynthesis, here we report the use of next-generation massively parallel sequencing technologies and de novo transcr...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-011-9811-z
更新日期：2011-10-01 00:00:00
abstract：:A method is described for the high frequency transformation of carrot proembryogenic suspension culture cells by a non-oncogenic Ti-plasmid vector (pGV3850::1103) which carried a chimaeric kanamycin resistance gene (nos-NPT-II). Plants were regenerated efficiently from transformed material by somatic embryogenesis in ...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00015034
更新日期：1987-05-01 00:00:00
abstract：:Rice genetic resources, comprising landrace varieties, modern and obsolete varieties, genetic stocks, breeding lines, and the wild rices, are the basis of world food security. The International Rice Genebank at the International Rice Research Institute in the Philippines conserves the largest and most diverse collecti...
journal_title：Plant molecular biology
pub_type： 杂志文章,评审
doi：
更新日期：1997-09-01 00:00:00
abstract：:The regulation of genes in response to wounding is mediated in part by the octadecanoids 12-oxo-phytodienoic acid (OPDA), jasmonic acid (JA) and its methyl ester methyl jasmonate (MeJA). We identified, by differential display, an Arabidopsis gene (OPR3) induced after wounding. OPR3 is homologous to members of the flav...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1023/a:1006464822434
更新日期：2000-09-01 00:00:00
abstract：:The aminoglycoside antibiotic hygromycin B (Hyg) inhibits prokaryotic, chloroplast and mitochondrial protein synthesis. Because of the toxic effect of Hyg on plant cells, the HPT gene, encoding hygromycin phosphotransferase, has become one of the most widely used selectable markers in plant transformation. Yet the mec...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-015-0380-4
更新日期：2015-12-01 00:00:00
abstract：:In angiosperms the interactions between the secretory matrix of the stylar transmitting tract and the growing pollen tubes have central roles in determining a successful fertilization. Sp41 is a major glycosylated component of the soluble proteins of the transmitting tract matrix and exhibits (1-3)-beta-glucanase acti...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00014970
更新日期：1995-12-01 00:00:00
abstract：:We have cloned and sequenced a full-length cDNA for uroporphyrinogen decarboxylase (UROD, EC 4.1.1.37) from tobacco (Nicotiana tabacum L.) and a partial cDNA clone from barley (Hordeum vulgare L.). The cDNA of tobacco encodes a protein of 43 kDa, which has 33% overall similarity to UROD sequences determined from other...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00020244
更新日期：1995-05-01 00:00:00
abstract：KEY MESSAGE:TaPSK5 is a less conserved target of miR164 in wheat encoding a positive regulator of root growth and yield traits that could be used for crop improvement. MicroRNAs (miRNAs) play key roles in regulating plant growth and development by targeting the mRNAs of conserved genes. However, little is known about t...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-020-01064-1
更新日期：2020-12-01 00:00:00
abstract：:The nuclear gene mutant of barley, vir-115, shows a developmentally induced loss of D1 synthesis that results in inactivation of Photosystem II. Translation in plastids isolated from 1 h illuminated vir-115 seedlings is similar to wild type. In wild-type barley, illumination of plants for 16 to 72 h results in increas...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00043874
更新日期：1994-06-01 00:00:00
abstract：:cDNA clones were isolated and sequenced that encode two related but distinct rice cyclophilins, Cyp1 and Cyp2. The predicted amino acid sequences of each are 72% identical to human T-cell cyclophilin. Genomic DNA gel blot analysis suggests cyclophilins in rice are encoded by a small, 6-10-member gene family. Both Cyp1...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00028878
更新日期：1994-08-01 00:00:00
abstract：:Knowledge of the genes in gymnosperms encoding the apoproteins of the plant photoreceptor phytochrome is currently scanty as for gymnosperm nuclear protein coding sequences in general. Here we report two complete cDNA-derived sequences which code for two different types of gymnosperm phytochrome. One sequence stems fr...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1023/a:1006204318499
更新日期：1999-07-01 00:00:00
abstract：KEY MESSAGE:The expression of MdBBX10 was significantly induced by different stresses and ABA treatments. Overexpression of MdBBX10 in Arabidopsis significantly enhanced abiotic stresses tolerance by ABA signalling. The roles of B-box domain(s) containing proteins (BBXs) in regulation of flowering and light morphogenes...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-019-00828-8
更新日期：2019-03-01 00:00:00
abstract：:Complex signal transduction pathways underlie the myriad plant responses to attack by pathogens. Ca(2+) is a universal second messenger in eukaryotes that modulates various signal transduction pathways through stimulus-specific changes in its intracellular concentration. Ca(2+)-binding proteins such as calmodulin (CaM...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-005-8395-x
更新日期：2005-08-01 00:00:00
abstract：:In order to optimise expression of a foreign protein in transgenic plants we investigated the potential benefits of including a viral untranslated leader sequence within a plant transformation vector. A variety of 5 leaders, including the tobacco mosaic virus (TMV) leader sequence and 31 nucleotides of the cauliflower...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00021423
更新日期：1993-10-01 00:00:00
abstract：:In many temperate woody species, dormancy is induced by short photoperiods. Earlier studies have shown that the photoreceptor phytochrome A (phyA) promotes growth. Specifically, Populus plants that over-express the oat PHYA gene (oatPHYAox) show daylength-independent growth and do not become dormant. However, we show ...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-010-9619-2
更新日期：2010-05-01 00:00:00
abstract：:Three genes that encode MAP65-1 family proteins have been identified in the Nicotiana tabacum genome. In this study, NtMAP65-1c fusion protein was shown to bind and bundle microtubules (MTs). Further in vitro investigations demonstrated that NtMAP65-1c not only alters MT assembly and nucleation, but also exhibits high...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-010-9694-4
更新日期：2010-12-01 00:00:00
abstract：:R2R3-MYB genes play a pivotal role in regulating anthocyanin accumulation. Here, we report two tandemly duplicated R2R3-MYB genes in peach, PpMYB10.1 and PpMYB10.2, with the latter showing lower ability to induce anthocyanin accumulation than the former. Site-directed mutation assay revealed two amino acid changes in ...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/s11103-018-0773-2
更新日期：2018-09-01 00:00:00
abstract：:We have isolated and analyzed a pre-ferredoxin gene from Arabidopsis thaliana. This gene encodes a 148 amino acid precursor protein including a chloroplast transit peptide of 52 residues. Southern analysis shows the presence of a single copy of this ferredoxin (Fd) gene in the A. thaliana genome. Its expression is tis...
journal_title：Plant molecular biology
pub_type： 杂志文章
doi：10.1007/BF00027495
更新日期：1990-04-01 00:00:00
