A new regulatory protein, KSRP, mediates exon inclusion through an intronic splicing enhancer.

Abstract:

:We have purified and cloned a new splicing factor, KSRP. KSRP is a component of a multiprotein complex that binds specifically to an intronic splicing enhancer element downstream of the neuron-specific c-src N1 exon. This 75-kD protein induces the assembly of five other proteins, including the heterogeneous nuclear ribonucleoprotein F, onto the splicing enhancer. The sequence of the KSRP cDNA indicates that the protein contains four K homology RNA-binding domains and an unusual carboxy-terminal domain. KSRP is similar to two proteins, FUSE-binding protein and P-element somatic inhibitor. KSRP is expressed in both neural and non-neural cell lines, although it is present at higher levels in neural cells. Antibodies specific for KSRP inhibit the splicing of the N1 exon in vitro. Moreover, this inhibition of N1 splicing can be rescued by the addition of purified KSRP. KSRP is likely to regulate splicing from a number of intronic splicing enhancer sequences.

journal_name

Genes Dev

journal_title

Genes & development

authors

Min H,Turck CW,Nikolic JM,Black DL

doi

10.1101/gad.11.8.1023

subject

Has Abstract

pub_date

1997-04-15 00:00:00

pages

1023-36

issue

8

eissn

0890-9369

issn

1549-5477

journal_volume

11

pub_type

杂志文章
  • Tumor suppression and normal aging in mice with constitutively high p53 activity.

    abstract::The p53 inhibitor murine double-minute gene 2 (Mdm2) is a target for potential cancer therapies, however increased p53 function can be lethal. To directly address whether reduced Mdm2 function can inhibit tumorigenesis without causing detrimental side effects, we exploited a hypomorphic murine allele of mdm2 to compar...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1378506

    authors: Mendrysa SM,O'Leary KA,McElwee MK,Michalowski J,Eisenman RN,Powell DA,Perry ME

    更新日期:2006-01-01 00:00:00

  • A condensin-like dosage compensation complex acts at a distance to control expression throughout the genome.

    abstract::In many species, a dosage compensation complex (DCC) is targeted to X chromosomes of one sex to equalize levels of X-gene products between males (1X) and females (2X). Here we identify cis-acting regulatory elements that target the Caenorhabditis elegans X chromosome for repression by the DCC. The DCC binds to discret...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1751109

    authors: Jans J,Gladden JM,Ralston EJ,Pickle CS,Michel AH,Pferdehirt RR,Eisen MB,Meyer BJ

    更新日期:2009-03-01 00:00:00

  • Combinatorial control of Drosophila circular RNA expression by intronic repeats, hnRNPs, and SR proteins.

    abstract::Thousands of eukaryotic protein-coding genes are noncanonically spliced to produce circular RNAs. Bioinformatics has indicated that long introns generally flank exons that circularize in Drosophila, but the underlying mechanisms by which these circular RNAs are generated are largely unknown. Here, using extensive muta...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.270421.115

    authors: Kramer MC,Liang D,Tatomer DC,Gold B,March ZM,Cherry S,Wilusz JE

    更新日期:2015-10-15 00:00:00

  • Two lineage boundaries coordinate vertebrate apical ectodermal ridge formation.

    abstract::Proximal-distal outgrowth of the vertebrate limb bud is regulated by the apical ectodermal ridge (AER), which forms at an invariant position along the dorsal-ventral (D/V) axis of the embryo. We have studied the genetic and cellular events that regulate AER formation in the mouse. In contrast to implications from prev...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:

    authors: Kimmel RA,Turnbull DH,Blanquet V,Wurst W,Loomis CA,Joyner AL

    更新日期:2000-06-01 00:00:00

  • Genomic imprinting in plants-revisiting existing models.

    abstract::Genomic imprinting is an epigenetic phenomenon leading to parentally biased gene expression. Throughout the years, extensive efforts have been made to characterize the epigenetic marks underlying imprinting in animals and plants. As a result, DNA methylation asymmetries between parental genomes emerged as the primary ...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.332924.119

    authors: Batista RA,Köhler C

    更新日期:2020-01-01 00:00:00

  • Homozygosity for prion protein alleles encoding glutamine-171 renders sheep susceptible to natural scrapie.

    abstract::Natural scrapie has been viewed both as a recessive trait and as a contagious disease modulated by a host locus. To address this conundrum, we determined the structure of the sheep prion protein (PrP) gene, which contains three exons and extends over 20 kb of DNA. In the United States 86.4% of scrapie cases occur in S...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.8.8.959

    authors: Westaway D,Zuliani V,Cooper CM,Da Costa M,Neuman S,Jenny AL,Detwiler L,Prusiner SB

    更新日期:1994-04-15 00:00:00

  • A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator.

    abstract::GRF2, an abundant yeast protein of Mr approximately 127,000, binds to the GAL upstream activating sequence (UASG) and creates a nucleosome-free region of approximately 230 bp. Purified GRF2 binds to sequences found in many other UASs, in the 35S rRNA enhancer, at centromeres, and at telomeres. Although GRF2 stimulates...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.4.4.503

    authors: Chasman DI,Lue NF,Buchman AR,LaPointe JW,Lorch Y,Kornberg RD

    更新日期:1990-04-01 00:00:00

  • Drosophila lacking microRNA miR-278 are defective in energy homeostasis.

    abstract::The mechanisms that control energy homeostasis and tissue growth during development are closely linked through the insulin signal transduction pathway. Changes in the level of insulin and other hormones reflect the nutritional status of the animal to control circulating sugar levels and fat metabolism. Systemic defect...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.374406

    authors: Teleman AA,Maitra S,Cohen SM

    更新日期:2006-02-15 00:00:00

  • Expression of multiple novel Wnt-1/int-1-related genes during fetal and adult mouse development.

    abstract::The mammary tumor-associated proto-oncogene Wnt-1/int-1 encodes a secreted protein implicated in the regulation of neural development in vertebrates and segmental pattern in Drosophila. Using a PCR-based strategy, we isolated cDNAs encoding six novel, related proteins that are expressed in fetal mice. Predicted protei...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.4.12b.2319

    authors: Gavin BJ,McMahon JA,McMahon AP

    更新日期:1990-12-01 00:00:00

  • The Med proteins of yeast and their function through the RNA polymerase II carboxy-terminal domain.

    abstract::Mediator was resolved from yeast as a multiprotein complex on the basis of its requirement for transcriptional activation in a fully defined system. Three groups of mediator polypeptides could be distinguished: the products of five SRB genes, identified as suppressors of carboxy-terminal domain (CTD)-truncation mutant...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.12.1.45

    authors: Myers LC,Gustafsson CM,Bushnell DA,Lui M,Erdjument-Bromage H,Tempst P,Kornberg RD

    更新日期:1998-01-01 00:00:00

  • A novel, activin-inducible, blastopore lip-specific gene of Xenopus laevis contains a fork head DNA-binding domain.

    abstract::The organizer region, or dorsal blastopore lip, plays a central role in the initiation of gastrulation and the formation of the body axis during Xenopus development. A similar process can also be induced in ectodermal explants by activin or by injection of activin mRNA into embryos. We have searched early embryo-speci...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.6.4.599

    authors: Dirksen ML,Jamrich M

    更新日期:1992-04-01 00:00:00

  • A conserved ncRNA-binding protein recruits silencing factors to heterochromatin through an RNAi-independent mechanism.

    abstract::Long noncoding RNAs (lncRNAs) can trigger repressive chromatin, but how they recruit silencing factors remains unclear. In Schizosaccharomyces pombe, heterochromatin assembly on transcribed noncoding pericentromeric repeats requires both RNAi and RNAi-independent mechanisms. In Saccharomyces cerevisiae, which lacks a ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.226019.113

    authors: Marina DB,Shankar S,Natarajan P,Finn KJ,Madhani HD

    更新日期:2013-09-01 00:00:00

  • The need for enhancers is acquired upon formation of a diploid nucleus during early mouse development.

    abstract::The activity of the polyoma virus (PyV) origin of DNA replication was used as a sensitive assay for enhancer function in one- and two-cell mouse embryos by injecting embryos with plasmid DNA containing different PyV ori configurations, allowing them to continue development in vitro, and then measuring plasmid DNA repl...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.2.9.1115

    authors: Martínez-Salas E,Cupo DY,DePamphilis ML

    更新日期:1988-09-01 00:00:00

  • Polycomb protein Ezh2 regulates pancreatic beta-cell Ink4a/Arf expression and regeneration in diabetes mellitus.

    abstract::Proliferation of pancreatic islet beta cells is an important mechanism for self-renewal and for adaptive islet expansion. Increased expression of the Ink4a/Arf locus, which encodes the cyclin-dependent kinase inhibitor p16(INK4a) and tumor suppressor p19(Arf), limits beta-cell regeneration in aging mice, but the basis...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1742509

    authors: Chen H,Gu X,Su IH,Bottino R,Contreras JL,Tarakhovsky A,Kim SK

    更新日期:2009-04-15 00:00:00

  • Signaling pathways and steroid receptors modulating estrogen receptor α function in breast cancer.

    abstract::Estrogen receptor α (ER) is the major driver of ∼75% of breast cancers, and multiple ER targeting drugs are routinely used clinically to treat patients with ER+ breast cancer. However, many patients relapse on these targeted therapies and ultimately develop metastatic and incurable disease, and understanding the mecha...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.316646.118

    authors: Siersbæk R,Kumar S,Carroll JS

    更新日期:2018-09-01 00:00:00

  • Identification of a new APC/C recognition domain, the A box, which is required for the Cdh1-dependent destruction of the kinase Aurora-A during mitotic exit.

    abstract::The mitotic kinase Aurora A (Aur-A) is required for formation of a bipolar mitotic spindle and accurate chromosome segregation. In somatic cells, Aur-A protein and kinase activity levels peak during mitosis, and Aur-A is degraded during mitotic exit. Here, we investigated how Aur-A protein and kinase activity levels a...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1007302

    authors: Littlepage LE,Ruderman JV

    更新日期:2002-09-01 00:00:00

  • Analysis of lung tumor initiation and progression using conditional expression of oncogenic K-ras.

    abstract::Adenocarcinoma of the lung is the most common form of lung cancer, but the cell of origin and the stages of progression of this tumor type are not well understood. We have developed a new model of lung adenocarcinoma in mice harboring a conditionally activatable allele of oncogenic K-ras. Here we show that the use of ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.943001

    authors: Jackson EL,Willis N,Mercer K,Bronson RT,Crowley D,Montoya R,Jacks T,Tuveson DA

    更新日期:2001-12-15 00:00:00

  • biniou (FoxF), a central component in a regulatory network controlling visceral mesoderm development and midgut morphogenesis in Drosophila.

    abstract::The subdivision of the lateral mesoderm into a visceral (splanchnic) and a somatic layer is a crucial event during early mesoderm development in both arthropod and vertebrate embryos. In Drosophila, this subdivision leads to the differential development of gut musculature versus body wall musculature. Here we report t...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.917101

    authors: Zaffran S,Küchler A,Lee HH,Frasch M

    更新日期:2001-11-01 00:00:00

  • Purkinje cell protein-2 regulatory regions and transgene expression in cerebellar compartments.

    abstract::The Purkinje cell protein 2 (Pcp-2) is expressed in cerebellar Purkinje cells and retinal bipolar neurons. To illuminate how Pcp-2 expression is restricted to only two neuronal types and to derive tools to express heterologous genes in these neuronal subpopulations, genomic sequences of the mouse Pcp-2 gene have been ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.5.7.1136

    authors: Vandaele S,Nordquist DT,Feddersen RM,Tretjakoff I,Peterson AC,Orr HT

    更新日期:1991-07-01 00:00:00

  • Hedgehog-regulated localization of Vax2 controls eye development.

    abstract::Cell fates in the optic neuroepithelium are determined by the combinational action of homeotic transcription factors. One of these is Vax2, a homeodomain protein that ventralizes the vertebrate eye field by repressing transcription of the Pax6 gene. We find that Vax2 shuttles between the nucleus and cytoplasm as a fun...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1462706

    authors: Kim JW,Lemke G

    更新日期:2006-10-15 00:00:00

  • Phosphorylation of NtMAP65-1 by a MAP kinase down-regulates its activity of microtubule bundling and stimulates progression of cytokinesis of tobacco cells.

    abstract::The tobacco mitogen-activated protein kinase (MAPK) cascade, which includes MAPK NRK1/NTF6, positively regulates expansion of the cytokinetic machinery known as the phragmoplast, which is followed by the synthesis of cell plates for completion of cell division. However, molecular events lying between the MAPK and phra...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1408106

    authors: Sasabe M,Soyano T,Takahashi Y,Sonobe S,Igarashi H,Itoh TJ,Hidaka M,Machida Y

    更新日期:2006-04-15 00:00:00

  • Interleukin-7 induces N-myc and c-myc expression in normal precursor B lymphocytes.

    abstract::Expression of both N-myc and c-myc is induced rapidly and dramatically in normal pre-B cells after stimulation with interleukin-7 (IL-7), a pre-B cell-specific growth factor. These IL-7-induced increases in N-myc and c-myc expression are mediated at the transcriptional level; for N-myc, a major portion of the inductio...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.6.1.61

    authors: Morrow MA,Lee G,Gillis S,Yancopoulos GD,Alt FW

    更新日期:1992-01-01 00:00:00

  • A PDK1 homolog is necessary and sufficient to transduce AGE-1 PI3 kinase signals that regulate diapause in Caenorhabditis elegans.

    abstract::An insulin receptor-like signaling pathway regulates Caenorhabditis elegans metabolism, development, and longevity. Inactivation of the insulin receptor homolog DAF-2, the AGE-1 PI3K, or the AKT-1 and AKT-2 kinases causes a developmental arrest at the dauer stage. A null mutation in the daf-16 Fork head transcription ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.13.11.1438

    authors: Paradis S,Ailion M,Toker A,Thomas JH,Ruvkun G

    更新日期:1999-06-01 00:00:00

  • Reconstitution of human TFIIA activity from recombinant polypeptides: a role in TFIID-mediated transcription.

    abstract::Human TFIIA activity is composed of three subunits (alpha, beta, gamma). Here we report the isolation of a human cDNA clone encoding the gamma-subunit and the reconstitution of TFIIA activity from recombinant polypeptides (holo-TFIIA). Protein-protein interaction analysis established that the beta and gamma subunits o...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.8.19.2336

    authors: Sun X,Ma D,Sheldon M,Yeung K,Reinberg D

    更新日期:1994-10-01 00:00:00

  • Induction of medulloblastomas in p53-null mutant mice by somatic inactivation of Rb in the external granular layer cells of the cerebellum.

    abstract::Medulloblastomas are among the most common malignancies in childhood, and they are associated with substantial mortality and morbidity. The molecular pathogenesis as well as the ontogeny of these neoplasms is still poorly understood. We have generated a mouse model for medulloblastoma by Cre-LoxP-mediated inactivation...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:

    authors: Marino S,Vooijs M,van Der Gulden H,Jonkers J,Berns A

    更新日期:2000-04-15 00:00:00

  • Smad3-dependent nuclear translocation of beta-catenin is required for TGF-beta1-induced proliferation of bone marrow-derived adult human mesenchymal stem cells.

    abstract::Adult mesenchymal stem cells (MSCs) derived from bone marrow contribute to the regeneration of multiple types of mesenchymal tissues. Here we describe the functional role of a novel form of cross-talk between the transforming growth factor beta1 (TGF-beta1) and Wnt signaling pathways in regulating the activities of hu...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1388806

    authors: Jian H,Shen X,Liu I,Semenov M,He X,Wang XF

    更新日期:2006-03-15 00:00:00

  • Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription.

    abstract::The presence of Set2-mediated methylation of H3K36 (K36me) correlates with transcription frequency throughout the yeast genome. K36me targets the Rpd3S complex to deacetylate transcribed regions and suppress cryptic transcription initiation at certain genes. Here, using a genome-wide approach, we report that the Set2-...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1539307

    authors: Li B,Gogol M,Carey M,Pattenden SG,Seidel C,Workman JL

    更新日期:2007-06-01 00:00:00

  • Cyclin-B homologs in Saccharomyces cerevisiae function in S phase and in G2.

    abstract::We have cloned four cyclin-B homologs from Saccharomyces cerevisiae, CLB1-CLB4, using the polymerase chain reaction and low stringency hybridization approaches. These genes form two classes based on sequence relatedness: CLB1 and CLB2 show highest homology to the Schizosaccharomyces pombe cyclin-B homolog cdc13 involv...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.6.11.2021

    authors: Richardson H,Lew DJ,Henze M,Sugimoto K,Reed SI

    更新日期:1992-11-01 00:00:00

  • Hypersensitivity to DNA damage leads to increased apoptosis during early mouse development.

    abstract::Gastrulation in mice is associated with the start of extreme proliferation and differentiation. The potential cost to the embryo of a very rapid proliferation rate is a high production of damaged cells. We demonstrate a novel surveillance mechanism for the elimination of cells damaged by ionizing radiation during mous...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:

    authors: Heyer BS,MacAuley A,Behrendtsen O,Werb Z

    更新日期:2000-08-15 00:00:00

  • Expression of an activated ras gene causes developmental abnormalities in transgenic Drosophila melanogaster.

    abstract::We describe the developmental effects of the expression of a normal and mutated Drosophila ras gene ras2 in transgenic Drosophila. A Gly14----Val14 mutant (Gly14 in ras2 is equivalent to Gly12 in mammalian ras proteins) was constructed in ras2 by site-directed mutagenesis. Inducible constructs of ras2 and ras2Val14 we...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.2.5.567

    authors: Bishop JG 3rd,Corces VG

    更新日期:1988-05-01 00:00:00