Characterization of the genomic structure of the mouse APLP1 gene.

Abstract:

:Amyloid beta protein (beta A4), the major component of the core of amyloid plaques in Alzheimer disease, is derived from the transmembrane amyloid precursor proteins (APPs). Our recent studies showed that a murine member of the evolutionarily conserved APP family, amyloid precursor-like protein 1 (APLP1), is specifically localized to the cerebral cortex postsynaptic density and may thus participate in brain synaptic function. To investigate regulatory mechanisms of APLP1 synthesis at the genomic level, we isolated and characterized genomic clones containing the mouse APLP1 gene. Sequence analysis revealed a genomic structure consisting of 17 exons and a promoter region that is devoid of apparent TATA and CCAAT boxes. The 5' region contains putative binding sites for AP-1, heat-shock protein, and Sp1, suggesting that multiple elements are potentially involved in regulating transcription of the APLP1 gene.

journal_name

Genomics

journal_title

Genomics

authors

Zhong S,Wu K,Black IB,Schaar DG

doi

10.1006/geno.1996.0096

subject

Has Abstract

pub_date

1996-02-15 00:00:00

pages

159-62

issue

1

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(96)90096-8

journal_volume

32

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Expression analysis of microRNAs and their target mRNAs of testes with high and low sperm motility in domestic pigeons (Columba livia).

    abstract::Sperm motility is one of the most important indicators to evaluate poultry fertility. In order to explore key molecular regulation roles related to sperm motility, we employed testicular RNA sequencing of pigeon. A total of 705 known and 385 novel microRNAs were identified. Compared with the low sperm motility group, ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.12.024

    authors: Yin Z,Xu X,Tan Y,Cao H,Zhou W,Dong X,Mao H

    更新日期:2021-01-01 00:00:00

  • Molecular and cytogenetic characterization of a Chinese hamster/human hybrid cell line containing a der (21)t(Ypter-->cenY::cen21-->21qter) chromosome.

    abstract::Human/rodent somatic cell hybrids have been exceedingly useful in assigning human genes and DNA sequences to specific human chromosomes. As new technologies for analyzing the human chromosome complement of such human/rodent hybrid cells become available, it is of critical importance that these be applied to enhance ch...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1026

    authors: Patterson D,Hart I,Lai LW,Brahe C,Moscetti A,Tassone F,Raimondi E,Jones C

    更新日期:1993-01-01 00:00:00

  • The gene for human U2 snRNP auxiliary factor small 35-kDa subunit (U2AF1) maps to the progressive myoclonus epilepsy (EPM1) critical region on chromosome 21q22.3.

    abstract::We used targeted exon trapping to clone portions of genes from human chromosome 21q22.3. One trapped sequence showed complete homology with the cDNA of human U2AF35 (M96982; HGM-approved nomenclature U2AF1), which encodes for the small 35-kDa subunit of the U2 snRNP auxiliary factor. Using the U2AF1 cDNA as a probe, w...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0196

    authors: Lalioti MD,Gos A,Green MR,Rossier C,Morris MA,Antonarakis SE

    更新日期:1996-04-15 00:00:00

  • A comparison of gene expression profiles produced by SAGE, long SAGE, and oligonucleotide chips.

    abstract::A comparison study of short SAGE versus GeneChip and long SAGE was conducted to determine if data were interchangeable between the techniques. Although SAGE and Affymetrix chip expression levels showed a significant correlation using the set of genes for which there was reliable and unambiguous mapping from tag-to-gen...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2004.06.014

    authors: Lu J,Lal A,Merriman B,Nelson S,Riggins G

    更新日期:2004-10-01 00:00:00

  • Multipoint mapping of the central core disease locus.

    abstract::A linkage analysis with 12 DNA markers from proximal 19q was performed in eight families with central core disease (CCO). Two-point analysis gave a peak lod score of Z = 4.95 at theta = 0.00 for the anonymous marker D19S190 and of Z = 2.53 at theta = 0.00 for the ryanodine receptor (RYR1) candidate gene. Multipoint li...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1302

    authors: Schwemmle S,Wolff K,Palmucci LM,Grimm T,Lehmann-Horn F,Hübner C,Hauser E,Iles DE,MacLennan DH,Müller CR

    更新日期:1993-07-01 00:00:00

  • Fibulin-2 (FBLN2): human cDNA sequence, mRNA expression, and mapping of the gene on human and mouse chromosomes.

    abstract::Fibulin-2 is a new extracellular matrix protein that we recently identified by characterizing mouse cDNA clones. Fibulin-2 mRNA is prominently expressed in mouse heart tissue and is present in low amounts in other tissues. In this study, we isolated and sequenced a 4.1-kb human fibulin-2 cDNA, which encoded a mature p...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1404

    authors: Zhang RZ,Pan TC,Zhang ZY,Mattei MG,Timpl R,Chu ML

    更新日期:1994-07-15 00:00:00

  • Fluorescence-based resource for semiautomated genomic analyses using microsatellite markers.

    abstract::To facilitate the practical application of highly efficient semiautomated methods for general application in genomic analyses, we have developed a fluorescence-based microsatellite marker resource. Ninety highly polymorphic microsatellite markers were combined to provide a rapid, accurate, and highly efficient initial...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1628

    authors: Levitt RC,Kiser MB,Dragwa C,Jedlicka AE,Xu J,Meyers DA,Hudson JR

    更新日期:1994-11-15 00:00:00

  • Genetic basis of neural tube defects: the mouse gene loop-tail maps to a region of chromosome 1 syntenic with human 1q21-q23.

    abstract::A genetic basis for neural tube defects (NTD) is rarely doubted, but the genes involved have not yet been identified. This is partly due to a lack of suitable families on which to perform linkage analysis. An alternative approach is to use the many mouse genes that cause NTD as a means of isolating their human homolog...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(95)80165-i

    authors: Stanier P,Henson JN,Eddleston J,Moore GE,Copp AJ

    更新日期:1995-04-10 00:00:00

  • Mapping of aldose reductase gene sequences to human chromosomes 1, 3, 7, 9, 11, and 13.

    abstract::Aldose reductase (alditol:NAD(P)+ 1-oxidoreductase; EC 1.1.1.21) (AR) catalyzes the reduction of several aldehydes, including that of glucose, to the corresponding sugar alcohol. Using a complementary DNA clone encoding human AR, we mapped the gene sequences to human chromosomes 1, 3, 7, 9, 11, 13, 14, and 18 by somat...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1372

    authors: Bateman JB,Kojis T,Heinzmann C,Klisak I,Diep A,Carper D,Nishimura C,Mohandas T,Sparkes RS

    更新日期:1993-09-01 00:00:00

  • Transcriptional and epigenetic status of protamine 1 and 2 genes following round spermatids injection into mouse oocytes.

    abstract::The use of round spermatids that are fully active at the transcriptional level to create zygotes (i.e. round spermatid injection; ROSI) raises the question regarding the downregulation of all specific genes that are transcribed from the paternal genome at fertilization. In this study, we show that protamine 1 and 2 mR...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.12.004

    authors: Borghol N,Blachère T,Lefèvre A

    更新日期:2008-05-01 00:00:00

  • A point mutation creating an extra N-glycosylation site in fibrillin-1 results in neonatal Marfan syndrome.

    abstract::Fibrillin-1 is a large cysteine-rich glycoprotein of the 10-nm microfibrils in the extracellular matrix. A spectrum of mutations in the fibrillin-1 gene (FBN1) have been identified in patients with Marfan syndrome (MFS), and the majority of mutations resulting in the neonatal and often lethal form of MFS have been ide...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0492

    authors: Lönnqvist L,Karttunen L,Rantamäki T,Kielty C,Raghunath M,Peltonen L

    更新日期:1996-09-15 00:00:00

  • Single-strand conformational polymorphism (SSCP) mapping of the mouse genome: integration of the SSCP, microsatellite, and gene maps of mouse chromosome 1.

    abstract::Interspersed repetitive sequence (IRS) PCR and repetitive element-to-bubble (IRS-bubble) PCR have been utilized to rapidly generate large numbers of mouse-specific, chromosome 1-enriched STSs from mouse-hamster somatic cell hybrids. Single-strand conformational polymorphism (SSCP) has been used to localize 39 new repe...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(11)80007-8

    authors: Hunter KW,Watson ML,Rochelle J,Ontiveros S,Munroe D,Seldin MF,Housman DE

    更新日期:1993-12-01 00:00:00

  • Construction of 110 cosmid markers and a 4.5-Mb YAC contig on human chromosome 8p12-q11.

    abstract::Microcell hybrids containing various regions of human chromosome 8 were formed by microcell-mediated transfer of neo-tagged chromosome 8 into the cells derived from severe combined immunodeficiency (SCID) mouse. Thus, 110 cosmid markers were isolated from SV40-transformed SCID fibroblast cell line (SCVA) containing a ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1125

    authors: Kurimasa A,Suzuki N,Kumano S,Li H,Wells D,Wagner MJ,Chen F,Chen DJ,Oshimura M

    更新日期:1995-07-20 00:00:00

  • Genome-wide expression profiling of the transcriptomes of four Paulownia tomentosa accessions in response to drought.

    abstract::Paulownia tomentosa is an important foundation forest tree species in semiarid areas. The lack of genetic information hinders research into the mechanisms involved in its response to abiotic stresses. Here, short-read sequencing technology (Illumina) was used to de novo assemble the transcriptome on P. tomentosa. A to...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2014.08.008

    authors: Dong Y,Fan G,Deng M,Xu E,Zhao Z

    更新日期:2014-10-01 00:00:00

  • Tandem arrangement of the closely linked desmoglein genes on human chromosome 18.

    abstract::The desmogleins, together with the desmocollins, both members of the cadherin superfamily, are the adhesive proteins of the desmosome type of cell junction, characteristically found in epithelial cells. Three different human desmoglein isoforms are encoded by separate genes (DSG1, DSG2, and DSG3) located on chromosome...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(95)80067-v

    authors: Simrak D,Cowley CM,Buxton RS,Arnemann J

    更新日期:1995-01-20 00:00:00

  • The mouse Laf4 gene: exon/intron organization, cDNA sequence, alternative splicing, and expression during central nervous system development.

    abstract::The cerebral cortex is a tissue with a high degree of neuronal diversity. It consists of six cell layers with a unique set of neuronal subtypes. A crucial step in the process of cortical differentiation is the transition from a mitotically active neuroblast to a postmitotic young neuron. To identify genes involved in ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2002.6796

    authors: Britanova O,Lukyanov S,Gruss P,Tarabykin V

    更新日期:2002-07-01 00:00:00

  • Targeted construction of a high-resolution, integrated, comprehensive, and comparative map for a region specific to bovine chromosome 6 based on radiation hybrid mapping.

    abstract::To resolve a candidate chromosome region on the middle part of bovine chromosome 6 (BTA6) containing several different quantitative trait locus (QTL) intervals, we constructed a high-resolution, integrated, comprehensive, and comparative map using a 12,000-rad, whole-genome, cattle-hamster radiation hybrid (RH) panel....

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2002.6778

    authors: Weikard R,Kühn C,Goldammer T,Laurent P,Womack JE,Schwerin M

    更新日期:2002-06-01 00:00:00

  • Localization of the gene for the ciliary neurotrophic factor receptor (CNTFR) to human chromosome 9.

    abstract::Ciliary neurotrophic factor (CNTF) has recently been found to be important for the survival of motor neurons and has shown activity in animal models of amyotrophic lateral sclerosis (ALS). CNTF therefore holds promise as a treatment for ALS, and it and its receptor (CNTFR) are candidates for a gene involved in familia...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1409

    authors: Donaldson DH,Britt DE,Jones C,Jackson CL,Patterson D

    更新日期:1993-09-01 00:00:00

  • The CD39-like gene family: identification of three new human members (CD39L2, CD39L3, and CD39L4), their murine homologues, and a member of the gene family from Drosophila melanogaster.

    abstract::The human lymphoid cell activation antigen CD39 is a known E-type apyrase that hydrolyzes extracellular ATP and ADP, a function important in homotypic adhesion, platelet aggregation, and removal by activated lymphocytes of the lytic effect of ATP. The recently identified putative rat homologue of CD39L1 has been shown...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5317

    authors: Chadwick BP,Frischauf AM

    更新日期:1998-06-15 00:00:00

  • Genetic modifiers of Leprfa associated with variability in insulin production and susceptibility to NIDDM.

    abstract::In an attempt to identify the genetic basis for susceptibility to non-insulin-dependent diabetes mellitus within the context of obesity, we generated 401 genetically obese Leprfa/Leprfa F2 WKY13M intercross rats that demonstrated wide variation in multiple phenotypic measures related to diabetes, including plasma gluc...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4672

    authors: Chung WK,Zheng M,Chua M,Kershaw E,Power-Kehoe L,Tsuji M,Wu-Peng XS,Williams J,Chua SC Jr,Leibel RL

    更新日期:1997-05-01 00:00:00

  • Regional localization of over 300 loci on human chromosome 22 using a somatic cell hybrid mapping panel.

    abstract::A somatic cell hybrid panel, consisting of 25 cell lines, has been developed to localize loci subregionally on chromosome 22. Over 300 markers in the form of STSs or hybridization probes have been assigned to one of 24 unique regions or "bins" using this panel. This ordered collection of markers will aid in the assemb...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0358

    authors: Budarf ML,Eckman B,Michaud D,McDonald T,Gavigan S,Buetow KH,Tatsumura Y,Liu Z,Hilliard C,Driscoll D,Goldmuntz E,Meese E,Zwarthoff EC,Williams S,McDermid H,Dumanski JP,Biegel J,Bell CJ,Emanuel BS

    更新日期:1996-07-15 00:00:00

  • Integration of multi-objective PSO based feature selection and node centrality for medical datasets.

    abstract::In the past decades, the rapid growth of computer and database technologies has led to the rapid growth of large-scale medical datasets. On the other, medical applications with high dimensional datasets that require high speed and accuracy are rapidly increasing. One of the dimensionality reduction approaches is featu...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.07.027

    authors: Rostami M,Forouzandeh S,Berahmand K,Soltani M

    更新日期:2020-11-01 00:00:00

  • Characterization of the mouse Xpf DNA repair gene and differential expression during spermatogenesis.

    abstract::The human XPF protein, an endonuclease subunit essential for DNA excision repair, may also function in homologous recombination. To investigate a possible link between mammalian XPF and recombination that occurs during meiosis, we isolated, characterized, and determined an expression profile for the mouse Xpf gene. Th...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.6016

    authors: Shannon M,Lamerdin JE,Richardson L,McCutchen-Maloney SL,Hwang MH,Handel MA,Stubbs L,Thelen MP

    更新日期:1999-12-15 00:00:00

  • Discovery and annotation of novel microRNAs in the porcine genome by using a semi-supervised transductive learning approach.

    abstract::Despite the broad variety of available microRNA (miRNA) prediction tools, their application to the discovery and annotation of novel miRNA genes in domestic species is still limited. In this study we designed a comprehensive pipeline (eMIRNA) for miRNA identification in the yet poorly annotated porcine genome and demo...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2019.12.005

    authors: Mármol-Sánchez E,Cirera S,Quintanilla R,Pla A,Amills M

    更新日期:2020-05-01 00:00:00

  • The order and transcriptional orientation of the human COL13A1 and P4HA genes on chromosome 10 long arm determined by high-resolution FISH.

    abstract::The genes for type XIII collagen (COL13A1) and prolyl 4-hydroxylase (P4HA) were previously assigned to human chromosome 10q by radioactive in situ hybridization. Here we have applied fluorescence in situ hybridization combined with targets representing different levels of resolution to determine, first, the order of t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.5015

    authors: Horelli-Kuitunen N,Kvist AP,Helaakoski T,Kivirikko K,Pihlajaniemi T,Palotie A

    更新日期:1997-12-01 00:00:00

  • Howard Hughes Medical Institute and its role in genomic activities.

    abstract::Through its three operating programs, the Howard Hughes Medical Institute has supported a substantial amount of basic and clinical molecular research, has acted as a facilitator in initiating and funding a number of meetings, nationally and internationally, including work groups dealing with databases, and has support...

    journal_title:Genomics

    pub_type: 历史文章,杂志文章

    doi:10.1016/0888-7543(89)90141-9

    authors: Cahill GF,Hinton DR

    更新日期:1989-11-01 00:00:00

  • Physical mapping within the tuberous sclerosis linkage group in region 9q32-q34.

    abstract::Pulsed-field gel electrophoresis and flow dot-blot analysis have been used to construct a physical map of the q32-q34 region of chromosome 9, where one of the loci responsible for tuberous sclerosis (TSC1) has been mapped by genetic linkage. Five linked groups of markers have been defined by pulsed-field gel electroph...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1056

    authors: Harris RM,Carter NP,Griffiths B,Goudie D,Hampson RM,Yates JR,Affara NA,Ferguson-Smith MA

    更新日期:1993-02-01 00:00:00

  • The protein tyrosine phosphatase epsilon gene maps to mouse chromosome 7 and human chromosome 10q26.

    abstract::We have mapped the mouse protein tyrosine phosphatase epsilon (PTP epsilon, gene symbol Ptpre) gene to the distal region of chromosome 7 by linkage analysis using two sets of multilocus genetic crosses. The human PTP epsilon gene (gene symbol PTPRE) was mapped to chromosome 10q26 by fluorescence in situ hybridization....

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0061

    authors: Elson A,Kozak CA,Morton CC,Weremowicz S,Leder P

    更新日期:1996-02-01 00:00:00

  • Assignment of the human pulmonary surfactant protein D gene (SFTP4) to 10q22-q23 close to the surfactant protein A gene cluster.

    abstract::Pulmonary surfactant consists of a complex mixture of phospholipids and several proteins essential to normal respiratory function. Two of the surfactant proteins, SP-A and SP-D, appear to have lectin-like activity relevant to the local phagocytic defense. Using polymerase chain reaction (PCR)-based somatic cell hybrid...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1324

    authors: Kölble K,Lu J,Mole SE,Kaluz S,Reid KB

    更新日期:1993-08-01 00:00:00

  • Fructose-1,6-bisphosphatase: genetic and physical mapping to human chromosome 9q22.3 and evaluation in non-insulin-dependent diabetes mellitus.

    abstract::PCR primers specific to the human liver fructose-1,6-bisphosphatase (FBP) gene were designed and used to isolate a cosmid clone. Physical mapping of the FBP cosmid by FISH, and genetic mapping of an associated GA repeat polymorphism (PIC = 0.35), located the liver FBP gene to chromosome 9q22.3 with no recombination be...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.1230

    authors: Rothschild CB,Freedman BI,Hodge R,Rao PN,Pettenati MJ,Anderson RA,Akots G,Qadri A,Roh B,Fajans SS

    更新日期:1995-09-01 00:00:00