Homologies between human and marmoset (Callithrix jacchus) chromosomes revealed by comparative chromosome painting.

Abstract:

:Regions of DNA homology between human and marmoset (Callithrix jacchus) chromosomes have been demonstrated using fluorescence in situ hybridization. All 24 chromosome paints and two centromere repeat sequences from Homo sapiens (HSA) have been annealed to previously G-banded metaphase spreads of Callithrix jacchus. All human paint probes, except Y, successfully hybridized to marmoset chromosomes. Fifteen of them hybridized to one region only, seven to two regions, and paint 1 to three regions. Homologies proposed from previous banding comparisons have been confirmed for HSA 2, 4-6, 10-12, 18, 19, 21 and X and partially confirmed for HSA 1 and 3, but were not in agreement for HSA 14 and 17. Human centromere repeat sequences for X and 18 did not hybridize to marmoset chromosomes. Because, at present, there is the confusion situation of several different numbering systems for marmoset chromosomes, we propose a new simpler nomenclature based on descending order of chromosome size.

journal_name

Genomics

journal_title

Genomics

authors

Sherlock JK,Griffin DK,Delhanty JD,Parrington JM

doi

10.1006/geno.1996.0186

subject

Has Abstract

pub_date

1996-04-15 00:00:00

pages

214-9

issue

2

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(96)90186-X

journal_volume

33

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Characterization of the adrenoleukodystrophy-related (ALDR, ABCD2) gene promoter: inductibility by retinoic acid and forskolin.

    abstract::The adrenoleukodystrophy-related gene (ALDR, ABCD2) is a candidate modifier gene and a potential therapeutic target for X-linked adrenoleukodystrophy (ALD), a severe neurodegenerative disease. The ALDR gene is the closest homologue of the ALD gene, which encodes a peroxisomal ABC transporter involved in the catabolism...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6367

    authors: Pujol A,Troffer-Charlier N,Metzger E,Chimini G,Mandel JL

    更新日期:2000-11-15 00:00:00

  • Nonhomologous recombination between the cytochrome b558 heavy chain gene (CYBB) and LINE-1 causes an X-linked chronic granulomatous disease.

    abstract::We cloned and characterized a genomic DNA fragment including the deletion junction of a chronic granulomatous disease patient with a 25-kb deletion extending to the 5' two-thirds of CYBB. The 3' breakpoint of the deletion exists in exon 7 of CYBB. A LINE-1 element lies at 5 kb upstream of CYBB in normal persons, and t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5510

    authors: Kumatori A,Faizunnessa NN,Suzuki S,Moriuchi T,Kurozumi H,Nakamura M

    更新日期:1998-10-15 00:00:00

  • Synteny mapping in the bovine: genes from human chromosome 4.

    abstract::Genes homologous to those located on human chromosome 4 (HSA4) were mapped in the bovine to determine regions of syntenic conservation among humans, mice, and cattle. Previous studies have shown that two homologs of genes on HSA4, PGM2 and PEPS, are located in bovine syntenic group U15 (chromosome 6). The homologous m...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(05)80295-2

    authors: Zhang N,Threadgill DW,Womack JE

    更新日期:1992-09-01 00:00:00

  • Significant evidence for linkage of mite-sensitive childhood asthma to chromosome 5q31-q33 near the interleukin 12 B locus by a genome-wide search in Japanese families.

    abstract::Childhood-onset asthma is frequently found in association with atopy. Although asthmatic children may develop IgE antibodies against variety of allergens, asthma is associated primarily with allergy to house-dust mites, molds, or other allergens. In this study, we conducted a genome-wide linkage search in 47 Japanese ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6201

    authors: Yokouchi Y,Nukaga Y,Shibasaki M,Noguchi E,Kimura K,Ito S,Nishihara M,Yamakawa-Kobayashi K,Takeda K,Imoto N,Ichikawa K,Matsui A,Hamaguchi H,Arinami T

    更新日期:2000-06-01 00:00:00

  • Fibulin-2 (FBLN2): human cDNA sequence, mRNA expression, and mapping of the gene on human and mouse chromosomes.

    abstract::Fibulin-2 is a new extracellular matrix protein that we recently identified by characterizing mouse cDNA clones. Fibulin-2 mRNA is prominently expressed in mouse heart tissue and is present in low amounts in other tissues. In this study, we isolated and sequenced a 4.1-kb human fibulin-2 cDNA, which encoded a mature p...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1404

    authors: Zhang RZ,Pan TC,Zhang ZY,Mattei MG,Timpl R,Chu ML

    更新日期:1994-07-15 00:00:00

  • Cloning and characterization of RNF6, a novel RING finger gene mapping to 13q12.

    abstract::Myeloproliferative disorders frequently show deletions or rearrangements of the long arm of chromosome 13. We report here the cloning of RNF6, a new gene that maps close to the chromosome 13 breakpoint in a case of myelofibrosis with a t(4;13)(q26;q12). RNF6 is predicted to encode a 685-amino-acid protein with a coile...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.5802

    authors: Macdonald DH,Lahiri D,Sampath A,Chase A,Sohal J,Cross NC

    更新日期:1999-05-15 00:00:00

  • Linkage of plasminogen (PLG) and apolipoprotein(a) (LPA) in baboons.

    abstract::Four allelic forms of serum plasminogen (PLG) were detected in baboons (Papio hamadryas Linneaus 1758) by isoelectric focusing and were determined to be inherited as autosomal codominant traits. Linkage analysis of data from 179 progeny and their parents revealed that PLG is tightly linked (lod score = 30.20) to the g...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90016-8

    authors: VandeBerg JL,Weitkamp L,Kammerer CM,Weill P,Aivaliotis MJ,Rainwater DL

    更新日期:1991-12-01 00:00:00

  • A single segment substitution line population for identifying traits relevant to drought tolerance and avoidance.

    abstract::A population of chromosome segment substitution lines was developed using KDML105 as the recurrent parent and one of DH212 (IR68586-F2-CA-143) or DH103 (IR68586-F2-CA-31) as the donor parent. The donor parents are part of a doubled haploid population from a cross between CT9993, an upland japonica accession, and IR622...

    journal_title:Genomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ygeno.2019.10.001

    authors: Shearman JR

    更新日期:2019-10-31 00:00:00

  • Genomic characterization, localization, and functional expression of FGL2, the human gene encoding fibroleukin: a novel human procoagulant.

    abstract::For diseases in which thrombosis plays a pivotal role, such as virus-induced fulminant hepatitis, fetal loss syndrome, and xenograft rejection, the major procoagulant has remained elusive. Here we describe the isolation and functional expression of a distinct human prothrombinase, termed FGL2. The murine fgl2 gene pro...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6444

    authors: Yuwaraj S,Ding J,Liu M,Marsden PA,Levy GA

    更新日期:2001-02-01 00:00:00

  • Haplotypes in cystic fibrosis patients with or without pancreatic insufficiency from four European populations.

    abstract::We examined the allele and haplotype frequencies of five polymorphic DNA markers in 355 European cystic fibrosis (CF) patients (from Belgium, the German Democratic Republic, Greece, and Italy) who were divided into two groups according to whether they were or not taking supplementary pancreatic enzymes. The level of l...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90131-6

    authors: Devoto M,De Benedetti L,Seia M,Piceni Sereni L,Ferrari M,Bonduelle ML,Malfroot A,Lissens W,Balassopoulou A,Adam G

    更新日期:1989-11-01 00:00:00

  • Molecular cloning, genomic organization, and chromosomal localization of the human pancreatitis-associated protein (PAP) gene.

    abstract::Pancreatitis-associated protein (PAP) is a secretory pancreatic protein present in small amounts in normal pancreas and overexpressed during the acute phase of the pancreatitis. In this paper, we describe the cloning, characterization, and chromosomal mapping of the human PAP gene. The gene spans 2748 bp and contains ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1019

    authors: Dusetti NJ,Frigerio JM,Fox MF,Swallow DM,Dagorn JC,Iovanna JL

    更新日期:1994-01-01 00:00:00

  • Exon-intron structure of a 2.7-kb transcript of the STM7 gene with phosphatidylinositol-4-phosphate 5-kinase activity.

    abstract::The STM7 gene encodes a novel phosphatidylinositol-4-phosphate 5-kinase (PtdInsP 5-kinase) that is subject to alternative splicing and developmental control. We have recently presented data indicating that several splice variants of STM7 incorporate elements of the X25 sequence, previously implicated in the pathogenes...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4726

    authors: Pook MA,Carvajal JJ,Doudney K,Hillermann R,Chamberlain S

    更新日期:1997-05-15 00:00:00

  • Genome-wide analysis of tandem duplicated genes and their contribution to stress resistance in pigeonpea (Cajanus cajan).

    abstract::Pigeonpea is the main protein source for more than one billion people, and it shows a strong adaptation to biotic stress and abiotic stress. Gene duplication is a fundamental process in genome evolution. Although the draft sequence of the pigeonpea genome has been available since 2011, further analysis of tandem dupli...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.10.003

    authors: Liu C,Wu Y,Liu Y,Yang L,Dong R,Jiang L,Liu P,Liu G,Wang Z,Luo L

    更新日期:2020-10-11 00:00:00

  • Three-point linkage analysis using multiple DNA polymorphic markers in families with X-linked nephrogenic diabetes insipidus.

    abstract::The gene for X-linked nephrogenic diabetes insipidus (NDI), a disorder which, if untreated, causes severe dehydration, mental retardation, and possibly death in affected males, has been mapped recently to the Xq28 band through demonstration of linkage to the DX552 locus and other DNA markers (N. Knoers et al., 1987, C...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90352-2

    authors: Knoers N,van der Heyden H,van Oost BA,Monnens L,Willems J,Ropers HH

    更新日期:1989-04-01 00:00:00

  • Transcriptional regulation in eukaryotic ribosomal protein genes.

    abstract::Understanding ribosomal protein gene regulation provides a good avenue for understanding gene regulatory networks. Even after 5 decades of research on ribosomal protein gene regulation, little is known about how higher eukaryotic ribosomal protein genes are coordinately regulated at the transcriptional level. However,...

    journal_title:Genomics

    pub_type: 杂志文章,评审

    doi:10.1016/j.ygeno.2007.07.003

    authors: Hu H,Li X

    更新日期:2007-10-01 00:00:00

  • BMT: Bioinformatics mini toolbox for comprehensive DNA and protein analysis.

    abstract::Background Bioinformatics tools are of great significance and are used in different spheres of life sciences. There are wide variety of tools available to perform primary analysis of DNA and protein but most of them are available on different platforms and many remain undetected. Accessing these tools separately to pe...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.08.010

    authors: Iqbal MN,Rasheed MA,Awais M,Chammam W,Kanwal S,Khan SU,Saddick S,Tlili I

    更新日期:2020-11-01 00:00:00

  • Mapping of 228 ESTs and 26 genes into an integrated physical and genetic map of human chromosome 17.

    abstract::We have integrated genetic and physical mapping data for chromosome 17 subdivided into 26 bins, by using a panel of chromosome 17 deletion somatic cell hybrids. One hundred four short tandem repeat and STS markers have been localized into these bins and have enabled the ordering of 288 ESTs and 26 genes, including 142...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4906

    authors: Plummer SJ,Simmons JA,Adams L,Casey G

    更新日期:1997-10-01 00:00:00

  • Characterization of Arabidopsis AtUGT85A and AtGUS gene families and their expression in rapidly dividing tissues.

    abstract::In humans, uridine 5'-diphosphate glucuronosyltransferase (UGT) operates in opposition to glucuronidase (GUS) to control activity of diverse metabolites such as hormones by reversible conjugation with glucuronic acid. Previous data revealed that, as in mammals, these enzymes are required for plant life in that a UGT f...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2007.03.014

    authors: Woo HH,Jeong BR,Hirsch AM,Hawes MC

    更新日期:2007-07-01 00:00:00

  • Chromosomal localization of the human homeo box-containing genes, EN1 and EN2.

    abstract::The human homologs of the mouse homeo box-containing genes, En-1 and En-2, which show homology to the Drosophila engrailed gene, have been isolated. The human EN1 gene was mapped to chromosome 2 by analysis of mouse-human somatic cell hybrids. The human EN2 gene was localized to chromosome 7, 7q32-7qter, by analysis o...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90301-7

    authors: Logan C,Willard HF,Rommens JM,Joyner AL

    更新日期:1989-02-01 00:00:00

  • Localization of a new type of X-linked liver glycogenosis to the chromosomal region Xp22 containing the liver alpha-subunit of phosphorylase kinase (PHKA2).

    abstract::We describe here a new type of X-linked liver glycogen storage disease. The main symptoms include liver enlargement and growth retardation. The clinical and biochemical abnormalities of this glycogenosis are similar to those of classical X-linked liver glycogenosis due to phosphorylase kinase deficiency (XLG). However...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1322

    authors: Hendrickx J,Coucke P,Hors-Cayla MC,Smit GP,Shin YS,Deutsch J,Smeitink J,Berger R,Lee P,Fernandes J

    更新日期:1994-06-01 00:00:00

  • Organization of the human beta-adducin gene (ADD2).

    abstract::The intron-exon organization of the human beta-adducin gene (ADD2) has been determined from overlapping genomic clones. The gene spans over 100 kb on chromosome 2p13 and comprises 17 exons. Seven of the exons are identical in size to the corresponding exons of the alpha-adducin gene (4p16.3), suggesting gene duplicati...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4802

    authors: Gilligan DM,Lozovatsky L,Silberfein A

    更新日期:1997-07-15 00:00:00

  • The gene encoding human TFE3, a transcription factor that binds the immunoglobulin heavy-chain enhancer, maps to Xp11.22.

    abstract::TFE3, a member of the helix-loop-helix family of transcription factors, binds to the microE3 motif of the immunoglobulin heavy-chain enhancer and is expressed in many cell types. We have localized human TFE3 to the proximal short arm of the X chromosome using a somatic cell hybrid panel. A frequent RsaI RFLP detected ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90145-5

    authors: Henthorn PS,Stewart CC,Kadesch T,Puck JM

    更新日期:1991-10-01 00:00:00

  • DNA reassociation using oscillating phenol emulsions.

    abstract::Reassociating double-stranded DNA from single-stranded components is necessary for many molecular genetics experiments. The choice of a DNA reassociation method is dictated by the complexity of the starting material. Reassociation of simple oligomers needs only slow cooling in an aqueous environment, whereas reanneali...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2005.09.021

    authors: Bruzel A,Cheung VG

    更新日期:2006-02-01 00:00:00

  • Next generation sequencing identifies abnormal Y chromosome and candidate causal variants in premature ovarian failure patients.

    abstract::Premature ovarian failure (POF) is characterized by heterogeneous genetic causes such as chromosomal abnormalities and variants in causal genes. Recently, development of techniques made next generation sequencing (NGS) possible to detect genome wide variants including chromosomal abnormalities. Among 37 Korean POF pat...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2016.10.006

    authors: Lee Y,Kim C,Park Y,Pyun JA,Kwack K

    更新日期:2016-12-01 00:00:00

  • Physiological analysis and transcriptome sequencing reveal the effects of drier air humidity stress on Pterocarya stenoptera.

    abstract::Identifying physiological and transcriptomic changes can provide insights into the effects of drier air humidity stress on plants. In this study, we selected 6-month-old seedlings of Pterocarya stenoptera as study materials and used physiological index detection and transcriptome sequencing to investigate the adaptati...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.09.027

    authors: Ye XF,Li Y,Liu HL,He YX

    更新日期:2020-11-01 00:00:00

  • MEPE, a new gene expressed in bone marrow and tumors causing osteomalacia.

    abstract::Oncogenic hypophosphatemic osteomalacia (OHO) is characterized by a renal phosphate leak, hypophosphatemia, low-serum calcitriol (1,25-vitamin-D3), and abnormalities in skeletal mineralization. Resection of OHO tumors results in remission of the symptoms, and there is evidence that a circulating phosphaturic factor pl...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6235

    authors: Rowe PS,de Zoysa PA,Dong R,Wang HR,White KE,Econs MJ,Oudet CL

    更新日期:2000-07-01 00:00:00

  • Cloning of human chromosome 17-specific cDNAs using representational difference analysis and human-mouse hybrid cells.

    abstract::We employed cDNA representational difference analysis (RDA) with human-mouse somatic hybrid cells containing human chromosome 17 and obtained several cDNA clones specific for this chromosome. A cDNA library from PHA-stimulated T cells was screened with unknown cDNA clones obtained by RDA as probes. Subsequently, 1 com...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1997.4729

    authors: Tajima Y,Tashiro K,Camerini D

    更新日期:1997-06-01 00:00:00

  • "Major minisatellite loci" detected by minisatellite clones 33.6 and 33.15 correspond to the cognate loci D1S111 and D7S437.

    abstract::G. Chimini et al. (1989, Genomics 5: 316-324) have recently reported that the two multilocus DNA fingerprinting probes 33.6 and 33.15 each detect a single major site in the human genome, at 1q23 and 7q35-q36, respectively, and speculate that these sites represent particularly large loci homologous to these probes. How...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(90)90183-u

    authors: Jeffreys AJ,MacLeod A,Neumann R,Povey S,Royle NJ

    更新日期:1990-07-01 00:00:00

  • A human chromosome 11 NotI end clone library.

    abstract::A NotI end clone library has been constructed from a human-hamster hybrid cell line containing only human chromosome 11. Fifty-one NotI clones were chosen to characterize the library. The majority of NotI clones hybridize to small 15- to 200-kb fragments and have proven to be valuable for chromosome 11 physical mappin...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1120

    authors: Sanford J,Kim BW,Deaven LL,Jones C,Higgins MJ,Nowak NJ,Shows TB

    更新日期:1993-03-01 00:00:00

  • Organization and evolutionary relatedness of OR37 olfactory receptor genes in mouse and human.

    abstract::We report a comprehensive comparative analysis of human and mouse olfactory receptor (OR) genes encoding OR37 subtypes to determine the repertoire, chromosomal organization, and relatedness of these genes. Two OR37 clusters were found in both mouse (chromosome 4) and human (chromosome 9); with five genes in cluster I ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(03)00116-2

    authors: Hoppe R,Breer H,Strotmann J

    更新日期:2003-09-01 00:00:00