Sequences with high propensity to form G-quartet structures in kinetoplast DNA from Phytomonas serpens.

Abstract:

:Naturally occurring sequences containing repetitive guanine motifs have the potential to form tetraplex DNA. Phytomonas serpens minicircle DNA shows some regions where one strand is composed mainly of G and T (GT regions). These regions contain several stretches of contiguous guanines. An oligonucleotide was constructed with the sequence corresponding to one of these regions (Phyto-GT). It was demonstrated by native gel electrophoresis and methylation protection that Phyto-GT forms tetramolecular (G4), bimolecular (G'2) and unimolecular (G4') structures stabilized through G-quartets. Tetraplex DNA formation by this sequence could have biological relevance as it can be formed in physiological conditions and GT regions comprise approximately one-third of P. serpens and Crithidia oncopelti minicircles.

journal_name

Mol Biochem Parasitol

authors

Sá-Carvalho D,Traub-Cseko YM

doi

10.1016/0166-6851(95)00089-j

subject

Has Abstract

pub_date

1995-06-01 00:00:00

pages

103-9

issue

1-2

eissn

0166-6851

issn

1872-9428

pii

0166-6851(95)00089-J

journal_volume

72

pub_type

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