Quantitative estimate of the information relayed by the Schaffer collaterals.

abstract：:The calcium calmodulin dependent kinase (CaMKII) is important for long-term potentiation at dendritic spines. Photo-activatable GFP (PaGFP) - CaMKII fusions were used to map CaMKII movements between and within spines in dissociated hippocampal neurons. Photo-activated PaGFP (GFP*) generated in the shaft spread uniform...

journal_title：Journal of computational neuroscience

authors： Khan S,Reese TS,Rajpoot N,Shabbir A

更新日期：2012-08-01 00:00:00

abstract：:Implementation of double cable models to simulate the behavior of myelinated peripheral nerve fibers requires defining a segmentation of the internode between successive nodes of Ranvier. The number of internodal segments is a model parameter that is not well agreed on, with values in the literature ranging from 1 to ...

journal_title：Journal of computational neuroscience

authors： Dekker DM,Briaire JJ,Frijns JH

更新日期：2014-10-01 00:00:00

abstract：:Wider dissemination and testing of computational models are crucial to the field of computational neuroscience. Databases are being developed to meet this need. ModelDB is a web-accessible database for convenient entry, retrieval, and running of published models on different platforms. This article provides a guide to...

journal_title：Journal of computational neuroscience

authors： Hines ML,Morse T,Migliore M,Carnevale NT,Shepherd GM

更新日期：2004-07-01 00:00:00

abstract：:The influence of unreliable synapses on the dynamic properties of a neural network is investigated for a homogeneous integrate-and-fire network with delayed inhibitory synapses. Numerical and analytical calculations show that the network relaxes to a state with dynamic clusters of identical size which permanently exch...

journal_title：Journal of computational neuroscience

authors： Friedrich J,Kinzel W

更新日期：2009-08-01 00:00:00

abstract：:Phase precession is one of the most well known examples within the temporal coding hypothesis. Here we present a biophysical spiking model for phase precession in hippocampal CA1 which focuses on the interaction between place cells and local inhibitory interneurons. The model's functional block is composed of a place ...

journal_title：Journal of computational neuroscience

authors： Castro L,Aguiar P

更新日期：2012-08-01 00:00:00

abstract：:Sensory neurons code information about stimuli in their sequence of action potentials (spikes). Intuitively, the spikes should represent stimuli with high fidelity. However, generating and propagating spikes is a metabolically expensive process. It is therefore likely that neural codes have been selected to balance en...

journal_title：Journal of computational neuroscience

authors： Johnson EC,Jones DL,Ratnam R

更新日期：2016-04-01 00:00:00

abstract：:This paper presents a synergistic parametric and non-parametric modeling study of short-term plasticity (STP) in the Schaffer collateral to hippocampal CA1 pyramidal neuron (SC) synapse. Parametric models in the form of sets of differential and algebraic equations have been proposed on the basis of the current underst...

journal_title：Journal of computational neuroscience

authors： Song D,Wang Z,Marmarelis VZ,Berger TW

更新日期：2009-02-01 00:00:00

abstract：:The timing of transmitter release from nerve endings is considered nowadays as one of the factors determining the plasticity and efficacy of synaptic transmission. In the neuromuscular junction, the moments of release of individual acetylcholine quanta are related to the synaptic delays of uniquantal endplate currents...

journal_title：Journal of computational neuroscience

authors： Saveliev A,Khuzakhmetova V,Samigullin D,Skorinkin A,Kovyazina I,Nikolsky E,Bukharaeva E

更新日期：2015-10-01 00:00:00

abstract：:We consider whole-cell voltage-clamp data of isolated currents characterized by the Hodgkin-Huxley paradigm. We examine the errors associated with the typical parameter estimation method for these data and show them to be unsatisfactorally large especially if the time constants of activation and inactivation are not s...

journal_title：Journal of computational neuroscience

authors： Willms AR,Baro DJ,Harris-Warrick RM,Guckenheimer J

更新日期：1999-03-01 00:00:00

abstract：:Nonlinear dynamics provides a complementary framework to control theory for the quantitative analysis of the oculomotor control system. This paper presents a number of findings relating to the aetiology and mechanics of the pathological ocular oscillation jerk congenital nystagmus (jerk CN). A range of time series ana...

journal_title：Journal of computational neuroscience

authors： Akman OE,Broomhead DS,Clement RA,Abadi RV

更新日期：2006-10-01 00:00:00

abstract：:We construct a neuronal network to model the logic of associative conditioning as revealed in experimental results using the terrestrial mollusk Limax maximus. We show, in particular, how blocking to a previously conditioned stimulus in the presence of the unconditional stimulus, can emerge as a dynamical property of ...

journal_title：Journal of computational neuroscience

authors： Goel P,Gelperin A

更新日期：2006-12-01 00:00:00

abstract：:This work presents a neuroinformatic method for deriving mechanistic descriptions of fine-structured neural activity. This is a new development in the computer-assisted analysis of dynamics in conductance-based models, which is illustrated using single compartment models of an action potential. A sequence of abstract,...

journal_title：Journal of computational neuroscience

authors： Clewley R

更新日期：2011-04-01 00:00:00

abstract：:The active dendritic conductances shape the input-output properties of many principal neurons in different brain regions, and the various ways in which they regulate neuronal excitability need to be investigated to better understand their functional consequences. Using a realistic model of a hippocampal CA1 pyramidal ...

journal_title：Journal of computational neuroscience

authors： Migliore M,Messineo L,Ferrante M

更新日期：2004-01-01 00:00:00

abstract：:Neuronal responses are often characterized by the firing rate as a function of the stimulus mean, or the f-I curve. We introduce a novel classification of neurons into Types A, B-, and B+ according to how f-I curves are modulated by input fluctuations. In Type A neurons, the f-I curves display little sensitivity to in...

journal_title：Journal of computational neuroscience

authors： Lundstrom BN,Famulare M,Sorensen LB,Spain WJ,Fairhall AL

更新日期：2009-10-01 00:00:00

abstract：:We present a new method to characterize multi-input and output neuronal systems using information theory. To obtain a lower bound of transinformation we take three steps: (1) Estimation of the deterministic response to isolate components carrying stimulus information. The deviation of the original response from the de...

journal_title：Journal of computational neuroscience

authors： Eger M,Eckhorn R

更新日期：2002-05-01 00:00:00

abstract：:Waves have long been thought to be a fundamental mechanism for communicating information within a medium and are widely observed in biological systems. However, a quantitative analysis of biological waves is confounded by the variability and complexity of the response. This paper proposes a robust technique for extrac...

journal_title：Journal of computational neuroscience

authors： Robbins KA,Senseman DM

更新日期：2004-05-01 00:00:00

abstract：:The temporal durations between events often exert a strong influence over behavior. The details of this influence have been extensively characterized in behavioral experiments in different animal species. A remarkable feature of the data collected in these experiments is that they are often time-scale invariant. This ...

journal_title：Journal of computational neuroscience

authors： Almeida R,Ledberg A

更新日期：2010-02-01 00:00:00

abstract：:The kinematics of the hand and fingers were studied during various keystrokes in typing. These movements were defined by 17 degrees of freedom of motion, and methods were developed to identify simplifying strategies in the execution of the task. Most of the analysis was restricted to the 11 degrees of freedom of the f...

journal_title：Journal of computational neuroscience

authors： Soechting JF,Flanders M

更新日期：1997-01-01 00:00:00

abstract：:This modeling study examines the possible functional roles of two hyperpolarization-activated conductances in lateral superior olive (LSO) principal neurons. Inputs of these LSO neurons are transformed into an output, which provides a firing-rate code for a certain interaural sound intensity difference (IID) range. Re...

journal_title：Journal of computational neuroscience

authors： Szalisznyó K

更新日期：2006-04-01 00:00:00

abstract：:Characterizing how different cortical rhythms interact and how their interaction changes with sensory stimulation is important to gather insights into how these rhythms are generated and what sensory function they may play. Concepts from information theory, such as Transfer Entropy (TE), offer principled ways to quant...

journal_title：Journal of computational neuroscience

authors： Besserve M,Schölkopf B,Logothetis NK,Panzeri S

更新日期：2010-12-01 00:00:00

abstract：:This work presents a probabilistic method for inferring the parameter ranges in a biologically relevant mathematical model of the cortex most likely to be producing seizures observed in an electrocorticogram (ECoG) signal from a human subject. Additionally, this method produces a probabilistic pathway of the temporal ...

journal_title：Journal of computational neuroscience

authors： Dadok VM,Kirsch HE,Sleigh JW,Lopour BA,Szeri AJ

更新日期：2015-06-01 00:00:00

abstract：:The phase relationship between the activity of hippocampal place cells and the hippocampal theta rhythm systematically processes as the animal runs through the region in an environment called the place field of the cell. We present a minimal biophysical model of the phase precession of place cells in region CA3 of the...

journal_title：Journal of computational neuroscience

authors： Bose A,Booth V,Recce M

更新日期：2000-07-01 00:00:00

abstract：:The pathophysiology of auditory hallucination, a common symptom of schizophrenia, has yet been understood, but during auditory hallucination, primary auditory cortex (A1) shows paradoxical responses. When auditory stimuli are absent, A1 becomes hyperactive, while A1 responses to auditory stimuli are reduced. Such acti...

journal_title：Journal of computational neuroscience

authors： Lee JH

更新日期：2017-12-01 00:00:00

abstract：:Neural mass models are successful in modeling brain rhythms as observed in macroscopic measurements such as the electroencephalogram (EEG). While the synaptic current is explicitly modeled in current models, the single cell electrophysiology is not taken into account. To allow for investigations of the effects of chan...

journal_title：Journal of computational neuroscience

authors： Zandt BJ,Visser S,van Putten MJ,Ten Haken B

更新日期：2014-12-01 00:00:00

abstract：:The classical view of cortical information processing is that of a bottom-up process in a feedforward hierarchy. However, psychophysical, anatomical, and physiological evidence suggests that top-down effects play a crucial role in the processing of input stimuli. Not much is known about the neural mechanisms underlyin...

journal_title：Journal of computational neuroscience

authors： Siegel M,Körding KP,König P

更新日期：2000-03-01 00:00:00

abstract：:Epilepsy is one of the most common neurological disorders and is characterized by recurrent seizures. We use theoretical neuroscience tools to study brain dynamics during seizures. We derive and simulate a computational model of a network of hippocampal neuronal populations. Each population within the network is based...

journal_title：Journal of computational neuroscience

authors： Kameneva T,Ying T,Guo B,Freestone DR

更新日期：2017-04-01 00:00:00

abstract：:Retinal ganglion cells (RGCs) display differences in their morphology and intrinsic electrophysiology. The goal of this study is to characterize the ionic currents that explain the behavior of ON and OFF RGCs and to explore if all morphological types of RGCs exhibit the phenomena described in electrophysiological data...

journal_title：Journal of computational neuroscience

authors： Maturana MI,Kameneva T,Burkitt AN,Meffin H,Grayden DB

更新日期：2014-04-01 00:00:00

abstract：:Synchronization of excitable cells coupled by reciprocal inhibition is a topic of significant interest due to the important role that inhibitory synaptic interaction plays in the generation and regulation of coherent rhythmic activity in a variety of neural systems. While recent work revealed the synchronizing influen...

journal_title：Journal of computational neuroscience

authors： Oh M,Matveev V

更新日期：2009-04-01 00:00:00

abstract：:Gamma oscillations can synchronize with near zero phase lag over multiple cortical regions and between hemispheres, and between two distal sites in hippocampal slices. How synchronization can take place over long distances in a stable manner is considered an open question. The phase resetting curve (PRC) keeps track o...

journal_title：Journal of computational neuroscience

authors： Woodman MM,Canavier CC

更新日期：2011-10-01 00:00:00

abstract：:Stellate cells in the cat antero-ventral cochlear nucleus (AVCN) maintain a robust rate-place representation of vowel spectra over a wide range of stimulus levels. This rate-place representation resembles that of low threshold, high spontaneous rate (SR) auditory nerve fibers (ANFs) at low stimulus levels, and that of...

journal_title：Journal of computational neuroscience

authors： Lai YC,Winslow RL,Sachs MB

更新日期：1994-08-01 00:00:00