AFV1, a novel virus infecting hyperthermophilic archaea of the genus acidianus.

Abstract:

:We describe a novel virus, AFV1, of the hyperthermophilic archaeal genus Acidianus. Filamentous virions are covered with a lipid envelope and contain at least five different proteins with molecular masses in the range of 23-130 kDa and a 20.8-kb-long linear double-stranded DNA. The virus has been assigned to the family Lipothrixviridae on the basis of morphotypic characteristics. Host range is confined to several strains of Acidianus and the virus persists in its hosts in a stable carrier state. The latent period of virus infection is about 4 h. Viral DNA was sequenced and sequence similarities were found to the lipothrixvirus SIFV, the rudiviruses SIRV1 and SIRV2, as well as to conjugative plasmids and chromosomes of the genus Sulfolobus. Exceptionally for the linear genomes of archaeal viruses, many short direct repeats, with the sequence TTGTT or close variants thereof, are closely clustered over 300 bp at each end of the genome. They are reminiscent of the telomeric ends of linear eukaryal chromosomes.

journal_name

Virology

journal_title

Virology

authors

Bettstetter M,Peng X,Garrett RA,Prangishvili D

doi

10.1016/s0042-6822(03)00481-1

subject

Has Abstract

pub_date

2003-10-10 00:00:00

pages

68-79

issue

1

eissn

0042-6822

issn

1096-0341

pii

S0042682203004811

journal_volume

315

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • HIV-1 inactivation by 4-vinylpyridine is enhanced by dissociating Zn(2+) from nucleocapsid protein.

    abstract::Selective inactivation of critical cysteine residues in human immunodeficiency virus type one (HIV-1) was observed after treatment with 4-vinylpyridine (4-VP), with and without the membrane-permeable metal chelator N,N,N',N'-tetrakis(2-pyridylmethyl)-ethylenediamine (TPEN). Chromatographic analysis showed that cystein...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.01.045

    authors: Morcock DR,Thomas JA,Sowder RC 2nd,Henderson LE,Crise BJ,Gorelick RJ

    更新日期:2008-05-25 00:00:00

  • Human papillomavirus type 16 E7 oncoprotein engages but does not abrogate the mitotic spindle assembly checkpoint.

    abstract::The mitotic spindle assembly checkpoint (SAC) ensures faithful chromosome segregation during mitosis by censoring kinetochore-microtubule interactions. It is frequently rendered dysfunctional during carcinogenesis causing chromosome missegregation and genomic instability. There are conflicting reports whether the HPV1...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.06.006

    authors: Yu Y,Munger K

    更新日期:2012-10-10 00:00:00

  • A critical Sp1 element in the rhesus rhadinovirus (RRV) Rta promoter confers high-level activity that correlates with cellular permissivity for viral replication.

    abstract::KSHV establishes characteristic latent infections in vitro, while RRV, a related macaque rhadinovirus, establishes characteristic permissive infections with virus replication. We identified cells that are not permissive for RRV replication and recapitulate the latent KSHV infection and reactivation processes. The RRV ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2013.10.013

    authors: DeMaster LK,Rose TM

    更新日期:2014-01-05 00:00:00

  • Expression profiles of TCRbeta and CD8alpha mRNA correlate with virus-specific cell-mediated cytotoxic activity in ginbuna crucian carp.

    abstract::Our previous studies have demonstrated that virus-specific cell-mediated cytotoxicity of sensitized leukocytes can be induced using clonal ginbuna crucian carp and their syngeneic cell lines. In the present study, we attempt to determine if virus-specific cytotoxic cell populations of fish express CD8alpha and TCRbeta...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.01.019

    authors: Somamoto T,Yoshiura Y,Sato A,Nakao M,Nakanishi T,Okamoto N,Ototake M

    更新日期:2006-05-10 00:00:00

  • Escape variants of the XPR1 gammaretrovirus receptor are rare due to reliance on a splice donor site and a short hypervariable loop.

    abstract::Entry determinants in the XPR1 receptor for the xenotropic/polytropic mouse leukemia viruses (XP-MLVs) lie in its third and fourth putative extracellular loops (ECLs). The critical ECL3 receptor determinant overlies a splice donor and is evolutionarily conserved in vertebrate XPR1 genes; 2 of the 3 rare replacement mu...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.07.049

    authors: Lu X,Martin C,Bouchard C,Kozak CA

    更新日期:2014-11-01 00:00:00

  • Genetic analysis of the SARS-coronavirus spike glycoprotein functional domains involved in cell-surface expression and cell-to-cell fusion.

    abstract::The SARS-coronavirus (SARS-CoV) is the etiological agent of severe acute respiratory syndrome (SARS). The SARS-CoV spike (S) glycoprotein mediates membrane fusion events during virus entry and virus-induced cell-to-cell fusion. To delineate functional domains of the SARS-CoV S glycoprotein, single point mutations, clu...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2005.06.046

    authors: Petit CM,Melancon JM,Chouljenko VN,Colgrove R,Farzan M,Knipe DM,Kousoulas KG

    更新日期:2005-10-25 00:00:00

  • In vitro synthesis and characterization of DNA complementary to potato spindle tuber viroid.

    abstract::When DNase-digested calf thymus DNA is used as primer, the RNA-directed DNA polymerase of avian myeloblastosis virus will accept potato spindle tuber viroid (PSTV) as a template for DNA synthesis. The DNA obtained hybridizes specifically to PSTV and low molecular weight RNA isolated from PSTV-infected plants; no hybri...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(78)90180-0

    authors: Owens RA

    更新日期:1978-09-01 00:00:00

  • Analysis of mutations in the envelope gene of Moloney murine leukemia virus: separation of infectivity from superinfection resistance.

    abstract::Six deletion mutations and an insertion were generated in the env gene of cloned copies of Moloney murine leukemia virus DNA. All seven mutants were replication-defective as tested by transformation of NIH/3T3 cells. The mutant DNAs were introduced into NIH/3T3 cells to generate stable producer lines; all released vir...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90983-i

    authors: Granowitz C,Colicelli J,Goff SP

    更新日期:1991-08-01 00:00:00

  • Characterization of human adenovirus serotypes 5, 6, 11, and 35 as anticancer agents.

    abstract::Human adenovirus type 5 (Ad5) has been the most popular platform for the development of oncolytic Ads. Alternative Ad serotypes with low seroprevalence might allow for improved anticancer efficacy in Ad5-immune patients. We studied the safety and efficacy of rare serotypes Ad6, Ad11 and Ad35. In vitro cytotoxicity of ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.08.038

    authors: Shashkova EV,May SM,Barry MA

    更新日期:2009-11-25 00:00:00

  • Ex vivo detection of adenovirus specific CD4+ T-cell responses to HLA-DR-epitopes of the Hexon protein show a contracted specificity of T(HELPER) cells following stem cell transplantation.

    abstract::Human adenovirus (HAdV) is a cause of significant morbidity and mortality in immunocompromised patients, especially after stem cell transplantation (SCT). Viral clearance has been attributed to CD4(+) T-cell responses against the Hexon-protein, but the frequency of specific T(HELPER) cells is extremely low or not dete...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.10.049

    authors: Serangeli C,Bicanic O,Scheible MH,Wernet D,Lang P,Rammensee HG,Stevanovic S,Handgretinger R,Feuchtinger T

    更新日期:2010-02-20 00:00:00

  • The biological phenotype of HIV-1 is usually retained during and after sexual transmission.

    abstract::The biological phenotype of HIV-1 isolates from 21 subjects with primary HIV-1 infection was determined in primary lymphocytes and monocyte-derived macrophages as well as in three T-cell lines (MT-2, HUT78, and C8166). Seven isolates (33%) replicated on at least one cell line and were classified as rapid/high (n = 6) ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1534

    authors: Fiore JR,Björndal A,Peipke KA,Di Stefano M,Angarano G,Pastore G,Gaines H,Fenyö EM,Albert J

    更新日期:1994-10-01 00:00:00

  • Effects of antibody to the influenza A virus M2 protein on M2 surface expression and virus assembly.

    abstract::We have investigated the effect of a monoclonal antibody on influenza virus release and the cell surface expression of M2, comparing virus strains which were observed previously to be sensitive (A/Udorn) or resistant (A/WSN and A/Udorn variants) to growth inhibition by M2 antibody 14C2. Incubation of A/Udorn virus-inf...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1498

    authors: Hughey PG,Roberts PC,Holsinger LJ,Zebedee SL,Lamb RA,Compans RW

    更新日期:1995-10-01 00:00:00

  • Isolation of mutations of the phage Mu ner gene.

    abstract::A method was devised which allows the easy detection of mutations within the ner gene of Mu DNA. This method is based upon the observation that a transcriptional gene A-galK fusion containing the complete ner gene and the cts62 allele does not express the galK gene in an Escherichia coli strain lacking functional inte...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90621-6

    authors: König U,Kirschner P,Schumann W

    更新日期:1988-05-01 00:00:00

  • Two adenovirus proteins with redundant activities in virus growth facilitates tripartite leader mRNA accumulation.

    abstract::Most adenovirus-specific mRNAs expressed late after infection originate from a single transcription unit, the so-called major late transcription unit. All mRNAs expressed from this unit have in common a 201 nucleotide-long spliced tripartite leader segment attached to their 5' ends. Human adenovirus mutants that carry...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1234

    authors: Ohman K,Nordqvist K,Akusjärvi G

    更新日期:1993-05-01 00:00:00

  • Quasispecies, error catastrophe, and the antiviral activity of ribavirin.

    abstract::Ribavirin is the first synthetic, broad-spectrum antiviral nucleoside. Despite its more than 30 year history, the mechanism of action of this compound remains unclear and somewhat controversial. Recent data suggest the possibility that the activity of ribavirin against RNA viruses is a reflection of incorporation of r...

    journal_title:Virology

    pub_type: 杂志文章,评审

    doi:10.1006/viro.2002.1487

    authors: Graci JD,Cameron CE

    更新日期:2002-07-05 00:00:00

  • Thymocyte and peripheral blood T lymphocyte subpopulation changes in piglets following in utero infection with porcine reproductive and respiratory syndrome virus.

    abstract::Piglets infected in utero with porcine reproductive and respiratory syndrome virus (PRRSV) are born severely immunocompromised. In this article we more closely examine the effects of in utero PRRSV infection on circulating and thymic T cell populations. Numbers of CD4+, CD8+, and dual-positive lymphocytes were quantit...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1650

    authors: Feng WH,Tompkins MB,Xu JS,Brown TT,Laster SM,Zhang HX,McCaw MB

    更新日期:2002-10-25 00:00:00

  • Measles virus persistence in an immortalized murine macrophage cell line.

    abstract::Persistent infection with the Edmonston strain of measles virus (MV) has been established in IC-21 cells, an immortalized murine macrophage cell line. Persistence was established immediately without syncytia formation or cytopathic effects. MV was expressed in the majority of the cells as evidenced by immunofluorescen...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1047

    authors: Goldman MB,Buckthal DJ,Picciotto S,O'Bryan TA,Goldman JN

    更新日期:1995-02-20 00:00:00

  • Drosophila miR-956 suppression modulates Ectoderm-expressed 4 and inhibits viral replication.

    abstract::Small non-coding microRNAs (miRNAs) can modulate the outcome of virus infection. Here we explore the role of miRNAs in insect-virus interactions, in vivo, using the natural Drosophila melanogaster-Drosophila C virus (DCV) model system. Comparison of the miRNA expression profiles in DCV-infected and uninfected flies sh...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2016.12.009

    authors: Monsanto-Hearne V,Tham ALY,Wong ZS,Asgari S,Johnson KN

    更新日期:2017-02-01 00:00:00

  • The prolonged culture of human immunodeficiency virus type 1 in primary lymphocytes increases its sensitivity to neutralization by soluble CD4.

    abstract::Primary strains of human immunodeficiency virus type 1 (HIV-1) are known to adapt to replication in cell lines in vitro by becoming sensitive to soluble CD4 (sCD4) and neutralizing antibodies (NAb). T-cell lines favor isolation of variants that use CXCR4 as a co-receptor, while primary isolates predominantly use CCR5....

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2003.12.012

    authors: Pugach P,Kuhmann SE,Taylor J,Marozsan AJ,Snyder A,Ketas T,Wolinsky SM,Korber BT,Moore JP

    更新日期:2004-03-30 00:00:00

  • Circular DNA genomics (circomics) exemplified for geminiviruses in bean crops and weeds of northeastern Brazil.

    abstract::Circomics was coined to describe the combination of rolling circle amplification (RCA), restriction fragment length polymorphism (RFLP) and pyro-sequencing to investigate the genome structures of small circular DNAs. A batch procedure is described using 61 plant samples from Asia, South America and Central America whi...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.02.007

    authors: Wyant PS,Strohmeier S,Schäfer B,Krenz B,Assunção IP,Lima GS,Jeske H

    更新日期:2012-06-05 00:00:00

  • Characterization of proteinase cleavage sites in the N-terminal region of the RNA1-encoded polyprotein from Arabis mosaic virus (subgroup A nepovirus).

    abstract::Arabis mosaic virus is a subgroup A nepovirus. The RNA1-encoded polyprotein (P1) contains the domains for the NTP-binding protein (NTB), VPg, proteinase (Pro) and polymerase at its C-terminus. Putative cleavage sites delineating these domains have been proposed. However, the number and location of cleavage sites upstr...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.01.046

    authors: Wetzel T,Chisholm J,Bassler A,Sanfaçon H

    更新日期:2008-05-25 00:00:00

  • Nucleotide sequence and transcriptional analysis of molecular clones of CAEV which generate infectious virus.

    abstract::The lentivirus caprine arthritis-encephalitis virus (CAEV) is closely related by nucleotide sequence homology to visna virus and other sheep lentiviruses and shows less similarity to the other animal and human lentiviruses. The genomic organization of CAEV is very similar to that of visna virus and the South African o...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90303-9

    authors: Saltarelli M,Querat G,Konings DA,Vigne R,Clements JE

    更新日期:1990-11-01 00:00:00

  • Characterization and template properties of RNA dimers generated during flock house virus RNA replication.

    abstract::Flock house virus (FHV) is the best studied member of the Nodaviridae, a family of small, nonenveloped, isometric RNA viruses of insects and fish. Nodavirus genomes comprise two single-stranded positive-sense RNA segments (RNAs 1 and 2) that encode the viral RNA-dependent RNA polymerase (RdRp) and capsid protein precu...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1125

    authors: Albariño CG,Price BD,Eckerle LD,Ball LA

    更新日期:2001-10-25 00:00:00

  • Analysis of the virulence modulating region of potato spindle tuber viroid (PSTVd) by site-directed mutagenesis.

    abstract::A series of nucleotide substitutions (G46----C; C47----A; C315----U; U317----C) were introduced into the virulence modulating region of the intermediate strain of potato spindle tuber viroid (PSTVd) in order to examine their effect upon viroid infectivity and pathogenicity with the presence of all four mutations resul...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90468-5

    authors: Hammond RW

    更新日期:1992-04-01 00:00:00

  • Double-stranded ribonucleic acid from carnation cryptic virus.

    abstract::The nucleic acid of carnation cryptic virus has been identified as double-stranded RNA on the basis of (i) susceptibility to RNase in 0.1 x SSC (SSC = 0.15 M NaCl-0.015 M sodium citrate buffer, pH 7.0) and resistance to RNase in 2 x SSC and to DNase, (ii) reaction with an antiserum containing antibodies to dsRNA, and ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(81)90124-0

    authors: Lisa V,Boccardo G,Milne RG

    更新日期:1981-12-01 00:00:00

  • Sequence and organization of the Mamestra configurata nucleopolyhedrovirus genome.

    abstract::The nucleotide sequence of the genome of the nucleopolyhedrovirus (NPV) from Mamestra configurata (MacoNPV, isolate 90/2), a group II NPV, was determined and analyzed. The MacoNPV DNA genome consists of 155,060 bp and has an overall G+C content of 41.7%. Computer-assisted analysis predicted 169 open reading frames (OR...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1313

    authors: Li Q,Donly C,Li L,Willis LG,Theilmann DA,Erlandson M

    更新日期:2002-03-01 00:00:00

  • First field isolation of wound tumor virus from a plant host: minimal sequence divergence from the type strain isolated from an insect vector.

    abstract::A new strain of wound tumor virus (WTV) has been isolated from a periwinkle plant (Catharanthus roseus) that was among several used as bait plants in a blueberry field. The 12 segments of double-stranded RNA of the viral genome were isolated directly from infected tissue and found to have mobilities through agarose ge...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90568-v

    authors: Hillman BI,Anzola JV,Halpern BT,Cavileer TD,Nuss DL

    更新日期:1991-12-01 00:00:00

  • Studies on phage development. II. The maturation of T4 phage in the presence of puromycin.

    abstract::Maturation of T4 can proceed in the presence of 5-methyltryptophan or puromycin. Puromycin inhibits phage protein synthesis within a few seconds, thus limiting the amount of phage precursor material available for maturation. After the arrest of protein synthesis, maturation continues unabated until the limiting protei...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(66)90050-x

    authors: Piechowski MM,Susman M

    更新日期:1966-03-01 00:00:00

  • Packaging of DNA in cauliflower mosaic virus and bacteriophage SD studied with magnetic birefringence.

    abstract::Magnetic birefringence measurements are reported on solutions of two double-stranded DNA containing viruses: icosahedral cauliflower mosaic virus (CaMV) and SD, an isometric bacteriophage with a short tail. Assuming the signal comes predominantly from the DNA, constraints can be put on its packing geometry. The anisot...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90232-1

    authors: Torbet J,Timmins PA,Lvov Y

    更新日期:1986-12-01 00:00:00

  • The nonstructural proteins of Sindbis virus as studied with an antibody specific for the C terminus of the nonstructural readthrough polyprotein.

    abstract::A dodecapeptide containing the sequence of the C terminus of the nonstructural polyprotein of Sindbis virus has been synthesized and used to immunize rabbits. The antisera obtained precipitated polypeptides from cells infected with the HR strains of Sindbis or with temperature-sensitive mutants ts11 or ts18. Four diff...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90254-5

    authors: Lopez S,Bell JR,Strauss EG,Strauss JH

    更新日期:1985-03-01 00:00:00