Linkage mapping around the ragged (Ra) and wasted (wst) loci on distal mouse chromosome 2.

Abstract:

:Mice that are heterozygous for the ragged (Ra) mutation, which is semidominant, have ragged coats caused by an absence of certain hair types. Ra/Ra homozygous mice usually die soon after birth, are naked, and have edema. Mice that are homozygous for the recessive mutation wasted (wst) appear normal until soon after weaning, but then develop tremors and ataxia, undergo atrophy of the thymus and spleen, and die by around 28 days of age. The Ra and wst loci map to distal mouse chromosome 2, but have never been positioned with respect to molecular markers. We have now mapped each of these genes in interspecific backcrosses that were also typed for available molecular markers. The results show that Ra maps very close to D2Mit74 and Acra-4, with no recombinants in 165 mice, whereas wst maps 3 cM distal to the most telomeric molecular marker on mouse chromosome 2, Acra-4.

journal_name

Genomics

journal_title

Genomics

authors

Abbott C,Malas S,Pilz A,Pate L,Ali R,Peters J

doi

10.1006/geno.1994.1131

subject

Has Abstract

pub_date

1994-03-01 00:00:00

pages

94-8

issue

1

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(84)71131-1

journal_volume

20

pub_type

杂志文章

相关文献

GENOMICS文献大全
  • Wdr12, a mouse gene encoding a novel WD-Repeat Protein with a notchless-like amino-terminal domain.

    abstract::The WD-repeat protein family consists of a large group of structurally related yet functionally diverse proteins found predominantly in eukaryotic cells. These factors contain several (4-16) copies of a recognizable amino-acid sequence motif (the WD unit) thought to be organized into a "propeller-like" structure invol...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2001.6682

    authors: Nal B,Mohr E,Silva MI,Tagett R,Navarro C,Carroll P,Depetris D,Verthuy C,Jordan BR,Ferrier P

    更新日期:2002-01-01 00:00:00

  • YAC contig organization and CpG island analysis in Xq28.

    abstract::One hundred nineteen YACs were assembled into 6 contigs spanning about 7.1 Mb of Xq28. The contigs were formatted with 65 STSs and 136 hybridization probes and were extensive enough to be aligned and oriented by published genetic linkage and somatic cell hybrid panel data. Selected YACs from the entire region were map...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1994.1592

    authors: Palmieri G,Romano G,Ciccodicola A,Casamassimi A,Campanile C,Esposito T,Cappa V,Lania A,Johnson S,Reinbold R

    更新日期:1994-11-01 00:00:00

  • Striking bimodal methylation of the repeat unit of the tandem array encoding human U2 snRNA (the RNU2 locus).

    abstract::The genes encoding human U2 small nuclear RNA are arrayed in tandem (the RNU2 locus) and have undergone concerted evolution for >35 Myr. Tandem organization of repetitive sequences may facilitate recombination that underlies concerted evolution, but could risk instability. Since DNA methylation plays a crucial role in...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1999.6052

    authors: Jiang C,Liao D

    更新日期:1999-12-15 00:00:00

  • Clustering of hypervariable minisatellites in the proterminal regions of human autosomes.

    abstract::Six of the human minisatellites detected by DNA fingerprint probes have been localized by in situ hybridization to human metaphase chromosomes. These hypervariable loci are not dispersed at random in the human genome, but show preferential, though not exclusive, localization to terminal G-bands of human autosomes. Two...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(88)90127-9

    authors: Royle NJ,Clarkson RE,Wong Z,Jeffreys AJ

    更新日期:1988-11-01 00:00:00

  • Targeted construction of a high-resolution, integrated, comprehensive, and comparative map for a region specific to bovine chromosome 6 based on radiation hybrid mapping.

    abstract::To resolve a candidate chromosome region on the middle part of bovine chromosome 6 (BTA6) containing several different quantitative trait locus (QTL) intervals, we constructed a high-resolution, integrated, comprehensive, and comparative map using a 12,000-rad, whole-genome, cattle-hamster radiation hybrid (RH) panel....

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2002.6778

    authors: Weikard R,Kühn C,Goldammer T,Laurent P,Womack JE,Schwerin M

    更新日期:2002-06-01 00:00:00

  • The human ICAM2 gene maps to 17q23-25.

    abstract::The intercellular adhesion molecules ICAM1 and ICAM2 are the cell-surface ligands for the lymphocyte function-associated antigen LFA-1 (CD11a/CD18) and are thought to mediate cell-cell adhesion interactions required by the immune system. However, differences in tissue distribution, inducibility of expression, and over...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(91)90157-a

    authors: Sansom D,Borrow J,Solomon E,Trowsdale J

    更新日期:1991-10-01 00:00:00

  • Evolutionary rate heterogeneity between multi- and single-interface hubs across human housekeeping and tissue-specific protein interaction network: Insights from proteins' and its partners' properties.

    abstract::Integrating gene expression into protein-protein interaction network (PPIN) leads to the construction of tissue-specific (TS) and housekeeping (HK) sub-networks, with distinctive TS- and HK-hubs. All such hub proteins are divided into multi-interface (MI) hubs and single-interface (SI) hubs, where MI hubs evolve slowe...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2017.11.006

    authors: Biswas K,Acharya D,Podder S,Ghosh TC

    更新日期:2018-09-01 00:00:00

  • The Sp4H deletion may contain a new locus essential for postimplantation development.

    abstract::Sp4H is a semi-dominant mutation that maps to mouse chromosome 1. Heterozygous mice exhibit white spotting of the belly, whereas the fate of the homozygous embryos is unknown. We have previously shown that the entire coding region of the Pax3 gene is deleted in the Sp4H mutant. In this study, we have analyzed the fate...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0267

    authors: Fleming J,Pearce A,Brown SD,Steel KP

    更新日期:1996-06-01 00:00:00

  • Mapping of the taurine transporter gene to mouse chromosome 6 and to the short arm of human chromosome 3.

    abstract::Transport proteins have essential functions in the uptake of neurotransmitters and neuromodulators. We have mapped the gene encoding the taurine transporter, Taut, to the central region of mouse chromosome 6. Analysis of a cross segregating the neurological mutant mnd2 excluded Taut as a candidate gene for this closel...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(95)80146-d

    authors: Patel A,Rochelle JM,Jones JM,Sumegi J,Uhl GR,Seldin MF,Meisler MH,Gregor P

    更新日期:1995-01-01 00:00:00

  • Genome structure in soybean revealed by a genomewide genetic map constructed from a single population.

    abstract::A complete genetic linkage map of the soybean, in which sequence-based (SB) genetic markers are evenly distributed genomewide, was constructed from an F(12) population composed of 113 recombinant inbred lines derived from an interspecific cross involving Korean genotypes Hwangkeum and IT182932. Several approaches were...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2008.03.008

    authors: Yang K,Moon JK,Jeong N,Back K,Kim HM,Jeong SC

    更新日期:2008-07-01 00:00:00

  • Differential expansion of the N-formylpeptide receptor gene cluster in human and mouse.

    abstract::The human formylpeptide receptor (FPR) gene cluster has three members: FPR1 and FPRL1, which are expressed in neutrophils and monocytes and encode seven-transmembrane-domain chemotactic receptors specific for N-formylpeptides, and FPRL2, whose function is unknown. The FPRL1 receptor is also a lipoxin A4 receptor. Usin...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5376

    authors: Gao JL,Chen H,Filie JD,Kozak CA,Murphy PM

    更新日期:1998-07-15 00:00:00

  • The human immediate early gene BRF1 maps to chromosome 14q22-q24.

    abstract::BRF1 (Butyrate response factor 1) is a member of an immediate early gene family specifying putative nuclear transcription factors. A repeat motif incorporating two Cys and two His is highly conserved between family members identified from yeast, Drosophila, mouse, rat, and human. The chromosome localization of none of...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.0014

    authors: Maclean KN,See CG,McKay IA,Bustin SA

    更新日期:1995-11-01 00:00:00

  • Characterization of the rabbit agouti signaling protein (ASIP) gene: transcripts and phylogenetic analyses and identification of the causative mutation of the nonagouti black coat colour.

    abstract::The agouti locus encodes the agouti signalling protein (ASIP) which is involved in determining the switch from eumelanin to pheomelanin synthesis in melanocytes. In the domestic rabbit (Oryctolagus cuniculus) early studies indicated three alleles at this locus: A, light-bellied agouti (wild type); a(t), black and tan;...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2009.11.003

    authors: Fontanesi L,Forestier L,Allain D,Scotti E,Beretti F,Deretz-Picoulet S,Pecchioli E,Vernesi C,Robinson TJ,Malaney JL,Russo V,Oulmouden A

    更新日期:2010-03-01 00:00:00

  • Molecular cloning of a human co-beta-glucosidase cDNA: evidence that four sphingolipid hydrolase activator proteins are encoded by single genes in humans and rats.

    abstract::Authentic cDNAs encoding the activator protein for acid beta-glucosidase (EC3.2.1.45), co-beta-glucosidase, were cloned from the pCD and lambda gt11 human cDNA libraries. Initial screening with oligonucleotide mixtures encoding amino acid sequences of co-beta-glucosidase identified partial cDNAs which were used to obt...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(89)90014-1

    authors: Rorman EG,Grabowski GA

    更新日期:1989-10-01 00:00:00

  • cDNA cloning and gene structure of a novel water channel expressed exclusively in human kidney: evidence for a gene cluster of aquaporins at chromosome locus 12q13.

    abstract::A 1.8-kb cDNA clone (designed hKID, gene symbol AQP2L) with homology to the aquaporins was isolated from a human kidney cDNA library. The longest open reading frame of 846 bp encoded a 282-amino-acid hydrophobic protein that contained the conserved NPA motifs of MIP family members. Cell-free translation produced a non...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0396

    authors: Ma T,Yang B,Kuo WL,Verkman AS

    更新日期:1996-08-01 00:00:00

  • Statistical power for identifying nucleotide markers associated with quantitative traits in genome-wide association analysis using a mixed model.

    abstract::Use of mixed models is in the spotlight as an emerging method for genome-wide association studies (GWASs). This study investigated the statistical power for identifying nucleotide variants associated with quantitative traits using the mixed model methodology. Quantitative traits were simulated through design of herita...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2014.11.001

    authors: Shin J,Lee C

    更新日期:2015-01-01 00:00:00

  • Structure and evolution of the human prosaposin chromosomal gene.

    abstract::The gene for prosaposin was characterized by sequence analysis of chromosomal DNA to gain insight into the evolution of this locus that encodes four highly conserved sphingolipid activator proteins or saposins. The 13 exons ranged in size from 57 to 1200 bp, while the introns were from 91 to 3812 bp in length. The reg...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(92)90247-p

    authors: Rorman EG,Scheinker V,Grabowski GA

    更新日期:1992-06-01 00:00:00

  • Genetic regulation of endotoxin-induced airway disease.

    abstract::To identify novel genes regulating the biologic response to lipopolysaccharide (LPS), we used a combination of quantitative trait locus (QTL) analysis and microarray-based gene expression studies of C57BL/6J x DBA/2J(BXD) F2 and recombinant inbred (RI) mice. A QTL affecting pulmonary TNF-alpha production was identifie...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2003.12.008

    authors: Cook DN,Wang S,Wang Y,Howles GP,Whitehead GS,Berman KG,Church TD,Frank BC,Gaspard RM,Yu Y,Quackenbush J,Schwartz DA

    更新日期:2004-06-01 00:00:00

  • Epigenetic suppression of iNOS expression in human endothelial cells: A potential role of Ezh2-mediated H3K27me3.

    abstract:OBJECTIVE:Cytokines strongly induce expression of the inducible nitric oxide synthase (iNOS) in rodent but not in human endothelial cells. We recently identified NOS2 as a potential target of the histone methyltransferase enhancer of zeste homolog 2 which mediates trimethylation of histone 3 at lysine 27 (H3K27me3). M...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2016.02.002

    authors: Dreger H,Ludwig A,Weller A,Baumann G,Stangl V,Stangl K

    更新日期:2016-04-01 00:00:00

  • Localization of the human tripeptidyl peptidase II gene (TPP2) to 13q32-q33 by nonradioactive in situ hybridization and somatic cell hybrids.

    abstract::We have assigned the human tripeptidyl peptidase II (TPP2) gene to chromosome region 13q32-q33 using two different methods. First, a full-length TPP2 cDNA was used as a probe on Southern blots of DNA from a panel of human/rodent somatic cell hybrids. The TPP2 sequences were found to segregate with the human chromosome...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1353

    authors: Martinsson T,Vujic M,Tomkinson B

    更新日期:1993-08-01 00:00:00

  • A primary genetic map of the pericentromeric region of the human X chromosome.

    abstract::We report a genetic linkage map of the pericentromeric region of the human X chromosome, extending from Xp11 to Xq13. Genetic analysis with five polymorphic markers, including centromeric alpha satellite DNA, spanned a distance of approximately 38 cM. Significant lod scores were obtained with linkage analysis in 26 fa...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/0888-7543(88)90017-1

    authors: Mahtani MM,Willard HF

    更新日期:1988-05-01 00:00:00

  • Machine learning method using position-specific mutation based classification outperforms one hot coding for disease severity prediction in haemophilia 'A'.

    abstract::Haemophilia is an X-linked genetic disorder in which A and B types are the most common that occur due to absence or lack of protein factors VIII and IX, respectively. Severity of the disease depends on mutation. Available Machine Learning (ML) methods that predict the mutational severity by using traditional encoding ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2020.09.020

    authors: Singh VK,Maurya NS,Mani A,Yadav RS

    更新日期:2020-11-01 00:00:00

  • Stable transfer of zebrafish chromosome segments into mouse cells.

    abstract::Whole-cell fusion between zebrafish fibroblast-like ZF4 cells and mouse B78 melanoma cells resulted in hybrids containing one or a few zebrafish chromosome segments in a murine chromosomal background. Fluorescence in situ hybridization to hybrid cell metaphases with a zebrafish genomic DNA probe revealed that many hyb...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1996.0159

    authors: Ekker M,Speevak MD,Martin CC,Joly L,Giroux G,Chevrette M

    更新日期:1996-04-01 00:00:00

  • The human homologue of the Drosophila tailless gene (TLX): characterization and mapping to a region of common deletion in human lymphoid leukemia on chromosome 6q21.

    abstract::Deletion of the long arm of chromosome 6 (6q) is one of the most common chromosomal abnormalities in human hematological malignancies. Two distinct regions of minimal deletion have been identified by loss of heterozygosity studies at 6q25 to 6q27 (RMD-1) and at 6q21 to 6q23 (RMD-2), suggesting the presence of one or m...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1998.5270

    authors: Jackson A,Panayiotidis P,Foroni L

    更新日期:1998-05-15 00:00:00

  • Determination of X-chromosome inactivation status using X-linked expressed polymorphisms identified by database searching.

    abstract::The large number of redundant sequences available in nucleotide databases provides a resource for the identification of polymorphisms. Expressed polymorphisms in X-linked genes can be used to determine the inactivation status of the genes, and polymorphisms in genes that are subject to inactivation can then be used as...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.2000.6153

    authors: Kutsche R,Brown CJ

    更新日期:2000-04-01 00:00:00

  • Discovery of a null mutation in a human trace amine receptor gene.

    abstract::G-protein-coupled receptors (GPCRs) are important mediators of signal transduction, and mutations in GPCR-encoding genes can lead to disease states. Here we describe a null mutation in an orphan GPCR-encoding gene that is predicted to inactivate completely the encoded receptor. The TA(3) receptor is a putative member ...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/s0888-7543(03)00173-3

    authors: Vanti WB,Muglia P,Nguyen T,Cheng R,Kennedy JL,George SR,O'Dowd BF

    更新日期:2003-11-01 00:00:00

  • Physical and genetic mapping of a human apical epithelial Na+/H+ exchanger (NHE3) isoform to chromosome 5p15.3.

    abstract::A gene family of Na+/H+ exchanger isoforms has been identified. Characterization of rabbit NHE3 suggests that it is the apical epithelial Na+/H+ exchanger isoform responsible for transepithelial, electroneutral Na+ absorption in intestinal and renal epithelial cells. We have previously isolated from a human kidney cor...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1993.1122

    authors: Brant SR,Bernstein M,Wasmuth JJ,Taylor EW,McPherson JD,Li X,Walker S,Pouyssegur J,Donowitz M,Tse CM

    更新日期:1993-03-01 00:00:00

  • DNA-methylation dependent regulation of embryo-specific 5S ribosomal DNA cluster transcription in adult tissues of sea urchin Paracentrotus lividus.

    abstract::We have previously reported a molecular and cytogenetic characterization of three different 5S rDNA clusters in the sea urchin Paracentrotus lividus and recently, demonstrated the presence of high heterogeneity in functional 5S rRNA. In this paper, we show some important distinctive data on 5S rRNA transcription for t...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2013.08.001

    authors: Bellavia D,Dimarco E,Naselli F,Caradonna F

    更新日期:2013-10-01 00:00:00

  • Comparative analysis of neurological disorders focuses genome-wide search for autism genes.

    abstract::The behaviors of autism overlap with a diverse array of other neurological disorders, suggesting common molecular mechanisms. We conducted a large comparative analysis of the network of genes linked to autism with those of 432 other neurological diseases to circumscribe a multi-disorder subcomponent of autism. We leve...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1016/j.ygeno.2008.09.015

    authors: Wall DP,Esteban FJ,Deluca TF,Huyck M,Monaghan T,Velez de Mendizabal N,Goñí J,Kohane IS

    更新日期:2009-02-01 00:00:00

  • Regional assignment of 30 expressed sequence tags on human chromosome 7 using a somatic cell hybrid panel.

    abstract::The regional assignments of 30 expressed sequence tags (ESTs) on human chromosome 7 were determined by studying the segregation of their PCR-amplified products in a panel of mouse somatic cell hybrids. ESTs are important molecular landmarks for physical mapping and can be considered as tags to candidate genes for gene...

    journal_title:Genomics

    pub_type: 杂志文章

    doi:10.1006/geno.1995.0021

    authors: Patel RJ,Keen TJ,Grzeschik KH,Nierman WC,Hayes P,Bhattacharya SS,Inglehearn CF

    更新日期:1995-11-01 00:00:00