RNA polymerase II transcription and the functional organization of the mammalian cell nucleus.

Abstract:

:The study of RNA pol II-mediated transcription regulation has been dominated by molecular biological approaches. Although these methods continue to provide important insights, other approaches are required to insure against an oversimplified view of gene expression. Improvements in EM methods and the development of the confocal light microscope have provided alternative and complementary means of investigating gene regulation. Information on the "context" in which cis- and trans-acting factors operate can be achieved with these techniques. As a result, the spatial compartmentalization of nuclear processes involved in transcriptional and post-transcriptional processing has received considerable attention.

journal_name

Chromosoma

journal_title

Chromosoma

authors

Hendzel MJ,Bazett-Jones DP

doi

10.1007/BF00355315

subject

Has Abstract

pub_date

1995-02-01 00:00:00

pages

509-16

issue

8

eissn

0009-5915

issn

1432-0886

journal_volume

103

pub_type

杂志文章,评审
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    authors: Matsui S,Fuke M,Chai L,Sandberg AA,Elassouli S

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  • An elegant miRror: microRNAs in stem cells, developmental timing and cancer.

    abstract::MicroRNAs (miRNAs) were first discovered in genetic screens for regulators of developmental timing in the stem-cell-like seam cell lineage in Caenorhabditis elegans. As members of the heterochronic pathway, the lin-4 and let-7 miRNAs are required in the seam cells for the correct progression of stage-specific events a...

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    doi:10.1007/s00412-009-0210-z

    authors: Nimmo RA,Slack FJ

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  • Expermental hybridization within the genus Triturus (Urodela: Salamandridae). III. Evidence for crossing-over, true chiasmata and chomosomal homologies in the spermatogenesis of F1 species hybrids, T. cristatus carnifex female X T. marmoratus male.

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    doi:10.1007/BF00331572

    authors: Mancino G,Ragghianti M,Bucci-Innocenti S

    更新日期:1979-08-10 00:00:00

  • Suppression of quinacrine banding of human chromosomes by mounting in organic media.

    abstract::When A-banded human chromosomes mounted in water are transferred to an organic mounting medium, the chromosomes show uniform bright quinacrine fluorescence. This change is reversible. It is inferred that quinacrine is bound uniformly along the chromosomes, and that Q-banding is a consequence of a non-uniform distribut...

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    doi:10.1007/BF00294941

    authors: Sumner AT

    更新日期:1977-12-06 00:00:00

  • Isolation and molecular analysis of inv dup(15) and construction of a physical map of a common breakpoint in order to elucidate their mechanism of formation.

    abstract::An inverted duplication of chromosome 15 [inv dup(15)] is the most common supernumerary marker chromosome, comprising approximately 50% of all chromosomes in this class. Structurally, the inv dup(15) is a mirror image with the central axis defining a distal break within either the heterochromatic alpha-satellite array...

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    doi:10.1007/s004120000103

    authors: Wandstrat AE,Schwartz S

    更新日期:2000-11-01 00:00:00

  • In vivo modification of a maize engineered minichromosome.

    abstract::Engineered minichromosomes provide efficient platforms for stacking transgenes in crop plants. Methods for modifying these chromosomes in vivo are essential for the development of customizable systems for the removal of selection genes or other sequences and for the addition of new genes. Previous studies have demonst...

    journal_title:Chromosoma

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    doi:10.1007/s00412-013-0403-3

    authors: Gaeta RT,Masonbrink RE,Zhao C,Sanyal A,Krishnaswamy L,Birchler JA

    更新日期:2013-06-01 00:00:00

  • Main steps in DNA double-strand break repair: an introduction to homologous recombination and related processes.

    abstract::DNA double-strand breaks arise accidentally upon exposure of DNA to radiation and chemicals or result from faulty DNA metabolic processes. DNA breaks can also be introduced in a programmed manner, such as during the maturation of the immune system, meiosis, or cancer chemo- or radiotherapy. Cells have developed a vari...

    journal_title:Chromosoma

    pub_type: 杂志文章,评审

    doi:10.1007/s00412-017-0658-1

    authors: Ranjha L,Howard SM,Cejka P

    更新日期:2018-06-01 00:00:00

  • The proteins of polytene chromosomes of Drosophila hydei.

    abstract::It is reported that chromatin can be prepared from highly purified polytene nuclei from the salivary glands of third instar larvae of Drosophila hydei; such chromatin differs from that of diploid nuclei mainly by deficiencies in certain nonhistone chromosomal proteins. It is suggested that these proteins are important...

    journal_title:Chromosoma

    pub_type: 杂志文章

    doi:10.1007/BF00319831

    authors: Elgin SC,Boyd JB

    更新日期:1975-01-01 00:00:00

  • Distribution of interstitial telomere-like repeats and their adjacent sequences in a dioecious plant, Silene latifolia.

    abstract::The dioecious plant Silene latifolia has large, heteromorphic X and Y sex chromosomes that are thought to be derived from rearrangements of autosomes. To reveal the origin of the sex chromosomes in S. latifolia, we isolated and characterized telomere-homologous sequences from intra-chromosomal regions (interstitial te...

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    doi:10.1007/s00412-002-0213-5

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    更新日期:2002-12-01 00:00:00

  • Quantitative sequence characterization for repetitive DNA content in the supernumerary chromosome of the migratory locust.

    abstract::Repetitive DNA is a major component in most eukaryotic genomes but is ignored in most genome sequencing projects. Here, we report the quantitative composition in repetitive DNA for a supernumerary (B) chromosome, in the migratory locust (Locusta migratoria), by Illumina sequencing of genomic DNA from B-carrying and B-...

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    pub_type: 杂志文章

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    authors: Ruiz-Ruano FJ,Cabrero J,López-León MD,Sánchez A,Camacho JPM

    更新日期:2018-03-01 00:00:00

  • Localization of DNA in the condensed interphase chromosomes of Euglena.

    abstract::The localization of DNA in the condensed interphase chromosomes of Euglena was determined by immunoelectron microscopy. Deposits of gold particles that coincided with the localization of DNA followed threads that corresponded to the chromatin fibers. The threads were 55-80nm in diameter and were assumed to be supersol...

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    doi:10.1007/BF00337227

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  • Distinct features of nucleolus-associated domains in mouse embryonic stem cells.

    abstract::Heterochromatin in eukaryotic interphase cells frequently localizes to the nucleolar periphery (nucleolus-associated domains (NADs)) and the nuclear lamina (lamina-associated domains (LADs)). Gene expression in somatic cell NADs is generally low, but NADs have not been characterized in mammalian stem cells. Here, we g...

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    pub_type: 杂志文章

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    authors: Bizhanova A,Yan A,Yu J,Zhu LJ,Kaufman PD

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  • Evidence for three "classes" of microtubules in the interpolar space of the mitotic micronucleus of a ciliate and the participation of the nuclear envelope in conferring stability to microtubules.

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    pub_type: 杂志文章

    doi:10.1007/BF00330781

    authors: Eichenlaub-Ritter U,Ruthmann A

    更新日期:1982-01-01 00:00:00

  • Electron microscopic studies on the polytene chromosomes of Chironomus thummi salivary glands. I. Ultrastructural mapping.

    abstract::The method of ultrathin sections of unsquashed salivary gland polytene chromosomes of Ch. thummi was applied to their ultrastrual mapping. There was a good agreement between electron micrographs and Hägele's light microscopic map (1970) with respect to the pattern and number of bands. 94% of bands were identified in l...

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    pub_type: 杂志文章

    doi:10.1007/BF00288332

    authors: Kiknadze II,Perov NA,Chentsov YS

    更新日期:1976-03-31 00:00:00

  • Ultrastructure of regions containing homologous loci in polytene chromosomes of Drosophila melanogaster and Drosophila subobscura.

    abstract::We have used a new approach involving in situ hybridisation and electron microscopy to establish ultrastructural homologies between polytene chromosome regions of Drosophila melanogaster and Drosophila subobscura. Twelve probes were chosen to cover all the chromosomal elements: the myospheroid gene, the collagen type ...

    journal_title:Chromosoma

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    authors: Cuenca JB,Galindo MI,Saura AO,Sorsa V,de Frutos R

    更新日期:1998-05-01 00:00:00

  • A simple and rapid method for constructing ring-X chromosomes in Drosophila melanogaster.

    abstract::Ring chromosomes are of basic interest to the geneticist and cell biologist who study their behavior in meiotic and mitotic divisions. In addition, the mitotic instability associated with some ring-X chromosomes has proven useful in Drosophila as a means to produce gynandromorphs for developmental studies. We describe...

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    doi:10.1007/s00412-010-0297-2

    authors: Golic MM,Golic KG

    更新日期:2011-04-01 00:00:00

  • Incomplete sister chromatid separation of long chromosome arms.

    abstract::Chromosome segregation ensures the equal partitioning of chromosomes at mitosis. However, long chromosome arms may pose a problem for complete sister chromatid separation. In this paper we report on the analysis of cell division in primary cells from field vole Microtus agrestis, a species with 52 chromosomes includin...

    journal_title:Chromosoma

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    doi:10.1007/s00412-006-0077-1

    authors: Rens W,Torosantucci L,Degrassi F,Ferguson-Smith MA

    更新日期:2006-12-01 00:00:00

  • Macrosatellite epigenetics: the two faces of DXZ4 and D4Z4.

    abstract::Almost half of the human genome consists of repetitive DNA. Understanding what role these elements have in setting up chromatin states that underlie gene and chromosome function in complex genomes is paramount. The function of some types of repetitive DNA is obvious by virtue of their location, such as the alphoid arr...

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    authors: Chadwick BP

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  • Altered distribution of MLH1 foci is associated with changes in cohesins and chromosome axis compaction in an asynaptic mutant of tomato.

    abstract::In most multicellular eukaryotes, synapsis [synaptonemal complex (SC) formation] between pairs of homologous chromosomes during prophase I of meiosis is closely linked with crossing over. Asynaptic mutants in plants have reduced synapsis and increased univalent frequency, often resulting in genetically unbalanced game...

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    doi:10.1007/s00412-012-0363-z

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  • Developmental variation of the SUUR protein binding correlates with gene regulation and specific chromatin types in D. melanogaster.

    abstract::Eukaryotic genomes are organized in large chromatin domains that maintain proper gene activity in the cell. These domains may be permissive or repressive to the transcription of underlying genes. Based on its protein makeup, chromatin in Drosophila cell culture has been recently categorized into five color-coded state...

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  • Binding of sequences from the 5'- and 3'-nontranscribed spacers of the rat rDNA locus to the nucleolar matrix.

    abstract::Nucleolar matrix structures were obtained under different extraction conditions from highly purified isolated nucleoli. Their ultrastructural appearance, protein composition and capacity to bind rDNA preferentially were studied in a model binding system. A region spanning approximately 25 kb in the rat ribosomal gene ...

    journal_title:Chromosoma

    pub_type: 杂志文章

    doi:10.1007/BF00352403

    authors: Stephanova E,Stancheva R,Avramova Z

    更新日期:1993-03-01 00:00:00

  • Unique XCI evolution in Tokudaia: initial XCI of the neo-X chromosome in Tokudaia muenninki and function loss of XIST in Tokudaia osimensis.

    abstract::X chromosome inactivation (XCI) is an essential mechanism to compensate gene dosage in mammals. Here, we show that XCI has evolved differently in two species of the genus Tokudaia. The Amami spiny rat, Tokudaia osimensis, has a single X chromosome in males and females (XO/XO). By contrast, the Okinawa spiny rat, Tokud...

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  • Gene-sized DNA molecules of the macronuclei in three species of hypotrichs: size distributions and absence of nicks. DNA of ciliated protozoa. VIII.

    abstract::Macronuclear DNA s from three related hypotrichous ciliated protozoans were compared by agarose gel electrophoresis. Each was shown to be composed of DNA duplexes that yielded a unique pattern of bands overlying a continuous distribution of DNA sizes ranging from approximately 400 bp to approximately 20,000 bp. By EM,...

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    pub_type: 杂志文章

    doi:10.1007/BF00329546

    authors: Swanton MT,Heumann JM,Prescott DM

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  • Meiotic chromosome behaviour reflects levels of sequence divergence in Sus scrofa domestica satellite DNA.

    abstract::We present a general model for the evolution of chromosome-specific satellite DNA subfamilies. Sus scrofa domestica has a bimodal karyotype with two autosomal subsets of 12 meta-/submetacentric (Mc) and 6 acrocentric (Ac) chromosome types (Mc and Ac "subgenomes"). We show that the centromeric heterochromatin is charac...

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    pub_type: 杂志文章

    doi:10.1007/BF01731720

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  • Control of gene expression and assembly of chromosomal subdomains by chromatin regulators with antagonistic functions.

    abstract::Epigenetic regulation of higher-order chromatin structure controls gene expression and the assembly of chromosomal domains during cell division, differentiation, and development. The proposed "histone code" integrates a complex system of histone modifications and chromosomal proteins that establish and maintain distin...

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    doi:10.1007/s00412-005-0001-0

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    更新日期:2005-09-01 00:00:00

  • Understanding the birth of rupture-prone and irreparable micronuclei.

    abstract::Micronuclei are extra-nuclear bodies mainly derived from ana-telophase lagging chromosomes/chromatins (LCs) that are not incorporated into primary nuclei at mitotic exit. Unlike primary nuclei, most micronuclei are enclosed by nuclear envelope (NE) that is highly susceptible to spontaneous and irreparable rupture. Rup...

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    doi:10.1007/s00412-020-00741-w

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  • Characterization of fission yeast meiotic mutants based on live observation of meiotic prophase nuclear movement.

    abstract::We characterized four meiotic mutants of the fission yeast Schizosaccharomyces pombe by live observation of nuclear movement. Nuclei were stained with either the DNA-specific fluorescent dye Hoechst 33342 or jellyfish green fluorescent protein (GFP) fused with the N-terminal portion of DNA polymerase alpha. We first f...

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    pub_type: 杂志文章

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    更新日期:2000-01-01 00:00:00

  • Mutations in the insulator protein Suppressor of Hairy wing induce genome instability.

    abstract::Insulator proteins orchestrate the three-dimensional organization of the genome. Insulators function by facilitating communications between regulatory sequences and gene promoters, allowing accurate gene transcription regulation during embryo development and cell differentiation. However, the role of insulator protein...

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    abstract::The distribution of intermicrotubular bridges in spindles of tipulid spermatocytes (Pales ferruginea, first meiotic division) was analyzed using serial sections of pre-selected cells. Bridges were found in all spindle regions, including kinetochore microtubules and free microtubules in the chromosome fiber. The dimens...

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    pub_type: 杂志文章

    doi:10.1007/BF00328643

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  • Frequency and distribution of chiasmata in Syrian hamster spermatocytes studied by the BrdU antibody technique.

    abstract::The frequency and distribution of chiasmata and the nature of terminal "associations" was re-examined in Syrian hamster spermatocytes using the 5-bromo-2'-deoxyuridine (BrdU) antibody technique (BAT) for differential chromatid labelling. Differential chromatid substitution was achieved by BrdU incorporation at the pen...

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    doi:10.1007/BF01731702

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