Polymorphism study of seven SNPs at ADH genes in 15 Chinese populations.

Abstract:

:It has been shown that the variants of alcohol dehydrogenase (ADH) genes exhibit great diversities among various populations and are associated with susceptibility to alcoholism. To investigate the distribution of SNPs at ADH genes in Chinese populations and the genetic relationship of these groups, we collected 467 individuals from 15 groups distributing widely from north to south in China and genotyped 7 SNPs at ADH genes respectively. The statistic analyses of allele frequencies, estimated haplotype frequencies, pairwise linkage disequilibrium, AMOVA (analysis of molecular variance), pairwise Fst', and cluster analysis indicated (1) that six of these seven SNPs showed great variations in the 15 Chinese populations, and three of them (RsaI, SspI, EcoRI), were confirmed to be informative SNPs. However, the causative SNP ADH1B Arg47His confirmed in case-control studies could not act as significant indicator to distinguish bibulous groups from non-bibulous groups in healthy individuals; (2) haplotypes constructed with ADH SNPs could be used as markers to discern different populations in China, and six-allele haplotype "221211" was the most common one defined in present study; (3) on the basis of SNPs analysis of ADH genes, the 15 populations were grouped into northern groups and southern groups. Moreover, the origin relationship among the populations was indicated according to the results of cluster analysis.

journal_name

Hereditas

journal_title

Hereditas

authors

Ma L,Xue Y,Liu Y,Wang Z,Cui X,Li P,Fu S

doi

10.1111/j.1601-5223.2005.01910.x

subject

Has Abstract

pub_date

2005-02-01 00:00:00

pages

103-11

issue

2005

eissn

0018-0661

issn

1601-5223

pii

HRD1910

journal_volume

142

pub_type

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