4-Azido-2-nitrophenyl phosphate, a new photoaffinity derivative of inorganic phosphate. Study of its interaction with the inorganic phosphate binding site of beef heart mitochondrial adenosine triphosphatase.

Abstract:

:4-Azido-2-nitrophenyl phosphate (ANPP) was synthesized and characterized. ANPP, unlabeled or labeled by 32P, was used as a photoreactive analogue of Pi to study the Pi binding site(s) in isolated F1-ATPase and inside-out particles from beef heart mitochondria. In the dark, the phosphate bond of ANPP was cleaved by alkaline phosphatase but not by mitochondrial F1-ATPase. ANPP bound reversibly to the phosphate site of F1-ATPase as shown by competitive inhibition of binding of Pi to F1-ATPase by ANPP in the dark; the Ki value was 60 microM. Upon photoirradiation with visible light, [32P]ANPP bound covalently to F1-ATPase and inactivated the enzyme. Part of the added ANPP was, however, photolyzed with release of Pi. By extrapolation, it could be calculated that complete inactivatin of F1-ATPase was accompanied by incorporation of 32P radioactivity corresponding to 1 mol of [32P]ANPP per mol of F1-ATPase. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis of [32P]-ANPP-labeled F1-ATPase revealed only one radioactive peptide with a Mr of 50000. This peptide was characterized as the beta subunit of F1-ATPase by specific labeling with [14C]dicyclohexylcarbodiimide [Pougeois, R., Satre, M., & Vignais, P. V. (1979) Biochemistry 18, 1408-1413]. Photoirradiation of inside-out submitochondrial particles with [32P]ANPP resulted in the labeling of two peptides with a Mr of 50000 and 30000-32000; both labelings were significantly decreased by incubation of the particles with Pi prior to photoirradiation. The Mr 50000 peptide is most probably the beta subunit of F1-ATPase; the other peptide might be the Pi carrier protein.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Lauquin G,Pougeois R,Vignais PV

doi

10.1021/bi00561a013

subject

Has Abstract

pub_date

1980-09-30 00:00:00

pages

4620-6

issue

20

eissn

0006-2960

issn

1520-4995

journal_volume

19

pub_type

杂志文章
  • DCCD inhibits the reactions of the iron-sulfur protein in Rhodobacter sphaeroides chromatophores.

    abstract::N,N'-dicyclohexylcarbodiimide (DCCD) has been reported to inhibit proton translocation by cytochrome bc(1) and b(6)f complexes without significantly altering the rate of electron transport, a process referred to as decoupling. To understand the possible role of DCCD in inhibiting the protonogenic reactions of cytochro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001482u

    authors: Shinkarev VP,Ugulava NB,Crofts AR,Wraight CA

    更新日期:2000-12-26 00:00:00

  • Identification of the sterol- and actin-binding domains of plasma vitamin D binding protein (Gc-globulin).

    abstract::The mammalian plasma vitamin D binding protein (DBP), or Gc-globulin, is recognized to have at least two functional properties: sterol binding and G-actin sequestration. Affinity labeling of the sterol binding site with the radioactive electrophilic ligand, 3 beta-(bromoacetoxy)-25-hydroxycholecalciferol, followed by ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00146a021

    authors: Haddad JG,Hu YZ,Kowalski MA,Laramore C,Ray K,Robzyk P,Cooke NE

    更新日期:1992-08-11 00:00:00

  • Base protonation facilitates B-Z interconversions of poly(dG-dC) X poly(dG-dC).

    abstract::Comparative studies on the salt titration and the related kinetics for poly(dG-dC) X poly(dG-dC) in pH 7.0 and 3.8 solutions clearly suggest that base protonation facilitates the kinetics of B-Z interconversion although the midpoint for such a transition in acidic solution (2.0-2.1 M NaCl) is only slightly lower than ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00320a041

    authors: Chen FM

    更新日期:1984-12-04 00:00:00

  • Isolation of L-cell messenger RNA which lacks poly(adenylate).

    abstract::It has been found that centrifugation of (ethylenediamine)tetraacetic acid dissociated L-cell polyribosomes at 25 degrees C through preformed CS2SO4 density gradients containing 15% dimethyl sulfoxide resolves them into two distinct classes of particles that contain ribosomal and messenger RNA, respectively. Ribosomal...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00661a019

    authors: Greenberg JR

    更新日期:1976-08-10 00:00:00

  • Phospholipids chiral at phosphorus. Dramatic effects of phosphorus chirality on the deuterium NMR properties of the choline head group of phospholipids in the liquid crystalline phase.

    abstract::To probe the motional and conformational properties of the choline head group of 1,2-dipalmitoyl-sn-glycero-3-thiophosphocholine (DPPsC), the Rp, Sp, and Rp + Sp isomers of [alpha-D2]DPPsC, [beta-D2]DPPsC, and [delta-D9]DPPsC in the subgel, gel, and liquid crystalline phases were investigated with deuterium NMR, and t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00501a008

    authors: Loffredo WM,Jiang RT,Tsai MD

    更新日期:1990-12-11 00:00:00

  • RNA chain initiation by Escherichia coli RNA polymerase. Structural transitions of the enzyme in early ternary complexes.

    abstract::We have studied the properties and structures of a series of Escherichia coli RNA polymerase ternary complexes formed during the initial steps of RNA chain initiation and elongation. Five different templates were used that contained the bacteriophage T7 A1 promoter or the E. coli Tac or the lac UV5 promoter, as well a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00445a045

    authors: Krummel B,Chamberlin MJ

    更新日期:1989-09-19 00:00:00

  • Replication of antibiotic resistance plasmid R6K DNA in vitro.

    abstract::A soluble extract prepared from cells of an Escherichia coli strain carrying the antibiotic resistance plasmid R6K is capable of carrying out the complete process of R6K DNA replication. DNA synthesis in vitro is dependent on the four deoxyribo- and ribonucleotide triphosphates and is sensitive to rifampin and strepto...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00606a017

    authors: Inuzuka M,Helinski DR

    更新日期:1978-06-27 00:00:00

  • Cellular and enzymic synthesis of sphingomyelin.

    abstract::The synthesis of sphingomyelin was studied in baby hamster kidney cells and in subcellular fractions derived from rat liver. During pulse-chase experiments with [3H]choline in tissue culture cells, the specific radioactivity of sphingomyelin continued to increase after the specific activities of phosphocholine and cyt...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00540a027

    authors: Voelker DR,Kennedy EP

    更新日期:1982-05-25 00:00:00

  • Significance of the Protein Interface Configuration for Allostery in Imidazole Glycerol Phosphate Synthase.

    abstract::Imidazole glycerol phosphate synthase (ImGPS) from Thermotoga maritima is a model enzyme for studying allostery. The ImGPS complex consists of the cyclase subunit HisF and the glutaminase subunit HisH whose activity is stimulated by substrate binding to HisF in a V-type manner. To investigate the significance of a put...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.0c00332

    authors: Kneuttinger AC,Rajendran C,Simeth NA,Bruckmann A,König B,Sterner R

    更新日期:2020-07-28 00:00:00

  • Analyzing topography of membrane-inserted diphtheria toxin T domain using BODIPY-streptavidin: at low pH, helices 8 and 9 form a transmembrane hairpin but helices 5-7 form stable nonclassical inserted segments on the cis side of the bilayer.

    abstract::Low pH-induced membrane insertion by diphtheria toxin T domain is crucial for A chain translocation into the cytoplasm. To define the membrane topography of the T domain, the exposure of biotinylated Cys residues to the cis and trans bilayer surfaces was examined using model membrane vesicles containing a deeply inser...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049354j

    authors: Rosconi MP,Zhao G,London E

    更新日期:2004-07-20 00:00:00

  • Electron/proton coupling in bacterial nitric oxide reductase during reduction of oxygen.

    abstract::The respiratory nitric oxide reductase (NOR) from Paracoccus denitrificans catalyzes the two-electron reduction of NO to N(2)O (2NO + 2H(+) + 2e(-) --> N(2)O + H(2)O), which is an obligatory step in the sequential reduction of nitrate to dinitrogen known as denitrification. NOR has four redox-active cofactors, namely,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi050524h

    authors: Flock U,Watmough NJ,Adelroth P

    更新日期:2005-08-09 00:00:00

  • Effect of pressure on deuterium isotope effects of yeast alcohol dehydrogenase: evidence for mechanical models of catalysis.

    abstract::Moderate pressure accelerates hydride transfer catalyzed by yeast alcohol dehydrogenase, indicative of a large negative volume of activation [Cho and Northrop (1999) Biochemistry 38, 7470-7475]. A comparison of the effects of pressure on the oxidation of normal versus dideuteriobenzyl alcohol generates a monophasic de...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992537z

    authors: Northrop DB,Cho YK

    更新日期:2000-03-07 00:00:00

  • Coordinating role of His216 in MgATP binding and cleavage in pyruvate carboxylase.

    abstract::His216 is a well-conserved residue in pyruvate carboxylases and, on the basis of structures of the enzyme, appears to have a role in the binding of MgATP, forming an interaction with the 3'-hydroxyl group of the ribose ring. Mutation of this residue to asparagine results in a 9-fold increase in the Km for MgATP in its...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi4016814

    authors: Adina-Zada A,Jitrapakdee S,Wallace JC,Attwood PV

    更新日期:2014-02-18 00:00:00

  • Retroviral nucleocapsid protein specifically recognizes the base and the ribose of mononucleotides and mononucleotide components.

    abstract::The interaction of the retroviral nucleocapsid protein (NC) with nucleic acids forms the basis of its varied roles in the replication cycle, which include binding and condensing the viral RNA within the virion, stimulation of the early steps in reverse transcription, and dissociation from RNA in the replication comple...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00126a020

    authors: Secnik J,Gelfand CA,Jentoft JE

    更新日期:1992-03-24 00:00:00

  • Michler's hydrol blue: a sensitive probe for amyloid fibril detection.

    abstract::Michler's hydrol blue (MHB) is investigated with respect to photophysical properties in varied solvent environment and when bound to insulin and lysozyme fibrils. The MHB chromophore is shown to act like a molecular rotor and bind well to amyloid fibrils, where it exhibits a characteristic red-shift in its excitation ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi102016p

    authors: Kitts CC,Beke-Somfai T,Nordén B

    更新日期:2011-05-03 00:00:00

  • Oxidative chemistry in the GFP active site leads to covalent cross-linking of a modified leucine side chain with a histidine imidazole: implications for the mechanism of chromophore formation.

    abstract::The mechanism of chromophore biosynthesis in green fluorescent protein (GFP) is triggered by a spontaneous main chain cyclization reaction of residues 65-67. Here, we demonstrate that the initially colorless Y66L variant, designed to trap chromophore precursor states, is oxidatively modified to generate yellow chromop...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0503798

    authors: Rosenow MA,Patel HN,Wachter RM

    更新日期:2005-06-14 00:00:00

  • Proteolytic activity of alpha 2-macroglobulin-enzyme complexes toward human factor VIII/von Willebrand factor.

    abstract::The low level of enzymatic activity of certain alpha 2-macroglobulin-proteinase complexes could be important to the function of factor VIII/von Willebrand glycoprotein since it is especially sensitive to proteolytic cleavage. To test this possibility, complexes of alpha 2-macroglobulin with plasmin, trypsin, and throm...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00275a018

    authors: Switzer ME,Gordon HJ,McKee PA

    更新日期:1983-03-15 00:00:00

  • Ion Channel Formation by Tau Protein: Implications for Alzheimer's Disease and Tauopathies.

    abstract::Tau is a microtubule associated protein implicated in the pathogenesis of several neurodegenerative diseases. Because of the channel forming properties of other amyloid peptides, we employed planar lipid bilayers and atomic force microscopy to test tau for its ability to form ion permeable channels. Our results demons...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00988

    authors: Patel N,Ramachandran S,Azimov R,Kagan BL,Lal R

    更新日期:2015-12-22 00:00:00

  • Acetaldehyde--enkephalins: structure proof and some conformational deductions from one- and two-dimensional proton nuclear magnetic resonance spectra.

    abstract::The structure of the adduct formed by reaction of acetaldehyde and Met5-enkephalin has been determined by analysis of 400-MHz proton spectra: two-dimensional J spectroscopy was used to resolve and measure virtually all the overlapping resonances, and decoupling difference spectroscopy was used to assign the resonances...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00516a033

    authors: Gidley MJ,Hall LD,Sanders JK,Summers MC

    更新日期:1981-06-23 00:00:00

  • Oxidative protein folding in vitro: a study of the cooperation between quiescin-sulfhydryl oxidase and protein disulfide isomerase.

    abstract::The flavin-dependent quiescin-sulfhydryl oxidase (QSOX) inserts disulfide bridges into unfolded reduced proteins with the reduction of molecular oxygen to form hydrogen peroxide. This work investigates how QSOX and protein disulfide isomerase (PDI) cooperate in vitro to generate native pairings in two unfolded reduced...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi801604x

    authors: Rancy PC,Thorpe C

    更新日期:2008-11-18 00:00:00

  • pH dependence of enzyme reaction rates and deuterium isotope effects on the reduction of a new mechanism-based substrate by dihydrofolate reductase DHFR.

    abstract::The enzyme kinetics of the reduction of the substrate 6,8-dimethylpterin by chicken and recombinant human dihydrofolate reductases (DHFRs) have been examined over the pH range 5.0-8.0 in the presence of NADPH or (4R)-[2H]NADPH (NADPD). The pH profiles of the catalytic constant (Vmax/[E]o or kcat) showed pH independenc...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00011a031

    authors: Jeong SS,Gready JE

    更新日期:1995-03-21 00:00:00

  • High-resolution 13C NMR study of the topography and dynamics of methionine residues in detergent-solubilized bacteriorhodopsin.

    abstract::The proton transport membrane protein bacteriorhodopsin has been biosynthetically labeled with [methyl-13C]methionine and studied by high-resolution 13C NMR after solubilization in the detergent Triton X-100. The nine methionine residues of bacteriorhodopsin give rise to four well-resolved 13C resonances, two of which...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00230a012

    authors: Seigneuret M,Neumann JM,Levy D,Rigaud JL

    更新日期:1991-04-23 00:00:00

  • Functional annotation and three-dimensional structure of an incorrectly annotated dihydroorotase from cog3964 in the amidohydrolase superfamily.

    abstract::The substrate specificities of two incorrectly annotated enzymes belonging to cog3964 from the amidohydrolase superfamily were determined. This group of enzymes are currently misannotated as either dihydroorotases or adenine deaminases. Atu3266 from Agrobacterium tumefaciens C58 and Oant2987 from Ochrobactrum anthropi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi301483z

    authors: Ornelas A,Korczynska M,Ragumani S,Kumaran D,Narindoshvili T,Shoichet BK,Swaminathan S,Raushel FM

    更新日期:2013-01-08 00:00:00

  • NMR structures of the C-terminal segment of surfactant protein B in detergent micelles and hexafluoro-2-propanol.

    abstract::Although the membrane-associated surfactant protein B (SP-B) is an essential component of lung surfactant, which is itself essential for life, the molecular basis for its activity is not understood. SP-B's biophysical functions can be partially mimicked by subfragments of the protein, including the C-terminus. We have...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0481895

    authors: Booth V,Waring AJ,Walther FJ,Keough KM

    更新日期:2004-12-07 00:00:00

  • Lipid interaction converts prion protein to a PrPSc-like proteinase K-resistant conformation under physiological conditions.

    abstract::The conversion of prion protein (PrP) to the pathogenic PrPSc conformation is central to prion disease. Previous studies revealed that PrP interacts with lipids and the interaction induces PrP conformational changes, yet it remains unclear whether in the absence of any denaturing treatment, PrP-lipid interaction is su...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi700299h

    authors: Wang F,Yang F,Hu Y,Wang X,Wang X,Jin C,Ma J

    更新日期:2007-06-12 00:00:00

  • Phosphorescence studies of the interaction of myelin basic protein with phosphatidylserine vesicles.

    abstract::Phosphorescence from the lone tryptophan residue has been studied to monitor the interaction of myelin basic protein with phosphatidylserine vesicles. Spectral shifts in the phosphorescence of the protein in a glycerol-buffer (70:30 w/w) solvent at low temperature are consistent with fluorescence data obtained under a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00514a019

    authors: Vadas EB,Melançon P,Braun PE,Galley WC

    更新日期:1981-05-26 00:00:00

  • Methyl-accepting chemotaxis proteins of Escherichia coli: methylated at three sites in a single tryptic fragment.

    abstract::The location of the sites of methylation of the methyl-accepting chemotaxis proteins (MCP) of Escherichia coli has been investigated by trypsin digestion and mapping of the peptides. The two principal MCPs, MCP I and MCP II, were found to have very similar methyl-labeled peptide patterns. Each produced three major spe...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00507a051

    authors: Chelsky D,Dahlquist FW

    更新日期:1981-02-17 00:00:00

  • Temperature-induced conformational switch in intestinal fatty acid binding protein (IFABP) revealing an alternative mode for ligand binding.

    abstract::IFABP is a small beta-barrel protein with a short helix-turn-helix motif near the N-terminus that is thought to participate in the regulation of the uptake and delivery of fatty acids. In a previous work, we detected by near UV circular dichroism a reversible conformational transition of this protein occurring between...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi020680d

    authors: Arighi CN,Rossi JP,Delfino JM

    更新日期:2003-06-24 00:00:00

  • A synthetic 33-residue analogue of bovine brain calmodulin calcium binding site III: synthesis, purification, and calcium binding.

    abstract::The sequential solid-phase synthesis of a peptide analogue of bovine brain calmodulin calcium binding site III covering residues 81-113 of the natural sequence is described. Methionine-109 is replaced by a leucine residue to avoid complications in the synthesis and purification. In an attempt to relate the structure o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00393a019

    authors: Reid RE

    更新日期:1987-09-22 00:00:00

  • Physical mechanism for regulation of phosphoenolpyruvate-dependent glucose transport activity in Escherichia coli.

    abstract::The activity of the phosphoenolpyruvate-dependent glucose phosphotransferase system (PTS) in Escherichia coli is coupled to the oxidation-reduction potential. It is inhibited when the redox potential is increased above -300 mV either via substrate oxidation or via direct addition of oxidizing agents. Depending on the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00520a032

    authors: Robillard GT,Konings WN

    更新日期:1981-08-18 00:00:00