Abstract:
:Planar lipid bilayers represent a versatile platform for studying the functions of various membrane proteins as well as the development of biosensors. Despite the continuing technological progress in the fabrication of low-noise bilayer setups with mechanically and electrically stable planar bilayers, there is still a lack of software utilities for assistance during bilayer formation. We present here a multipurpose software tool, the bilayer lipid membrane (BLM) Analyzer which performs high-resolution measurements of bilayer capacitance and resistance using saw-tooth voltage stimulation. Based on the measured values of capacitance and resistance, the BLM Analyzer detects formation, stabilization, and breakage of lipid bilayer, automatically selects appropriate stimulus protocol, compensates for voltage offsets, and issues sound and voice alerts informing about the state of the measurement cycle. The principle of the BLM Analyzer is based on the integration of current responses within four equivalent time segments. It provides capacitance estimates with standard deviation of several femtofarads at temporal resolution of several tens of milliseconds. The functions of the BLM Analyzer were tested experimentally by monitoring formation and thinning of planar lipid bilayer.
journal_name
Biotechniquesjournal_title
BioTechniquesauthors
Novák P,Gaburjáková M,Zahradník Idoi
10.2144/000112384subject
Has Abstractpub_date
2007-03-01 00:00:00pages
335-6, 338-9, 341issue
3eissn
0736-6205issn
1940-9818pii
000112384journal_volume
42pub_type
杂志文章相关文献
BIOTECHNIQUES文献大全abstract::A simple, nondestructive PCR-based screening method has been developed for identifying putative transgenic soft white winter wheat (Triticum aestivum L.) carrying the coat protein gene of wheat streak mosaic virus. Removal of the endosperm end of individual seed provided sufficient material for DNA extraction and PCR....
journal_title:BioTechniques
pub_type:
doi:10.2144/02323st09
更新日期:2002-03-01 00:00:00
abstract::Perfluorocarbon emulsions were applied to hybridoma cultures grown in tissue culture tubes and column bioreactors. The oxygen transfer enhancement effect of perfluorocarbon emulsions was clearly demonstrated by the higher cell densities obtained in emulsion-supplemented systems. In addition, perfluorocarbon emulsions ...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1992-02-01 00:00:00
abstract::Plasmid DNA can be purified in 20 min using a three-step CsCl gradient in a vertical tube rotor. Ultracentrifugation with discontinuous gradients yields DNA with purity comparable to that obtained with longer isopycnic separations and with columns. ...
journal_title:BioTechniques
pub_type:
doi:
更新日期:1995-01-01 00:00:00
abstract::To establish a nonradioactive method for demonstrating HPV DNA in routinely treated smears of the uterine cervix (alcohol fixation, staining according to Papanicolaou, preservation), in situ hybridizations were carried out in HeLa and SiHa cells grown on slides. After detailed investigations, the sensitivity and speci...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1988-11-01 00:00:00
abstract::We report a straightforward methodology for purification of recombinant proteins by incorporating a short hydrophilic peptide marker segment at their N-termini. A calcium-dependent antibody that reacts primarily with the first three amino acids of this peptide segment was used to affinity purify the fusion proteins in...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1989-06-01 00:00:00
abstract::A simplified method for producing recombinant baculovirus for expression of foreign genes is described. The method utilizes insect cells infected with the wild-type virus before transfection with the plasmid transfer vector, instead of the standard procedure utilizing cotransfection with a plasmid and viral DNA. Recom...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1991-05-01 00:00:00
abstract::Gene expression analysis using high-density cDNA or oligonucleotide arrays is a rapidly emerging tool for transcriptomics, the analysis of the transcriptional state of a cell or organ. One of the limitations of current methodologies is the requirement of a relatively large amount of total or polyadenylated RNA as star...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/03343rr01
更新日期:2003-03-01 00:00:00
abstract::Real-time or quantitative loop-mediated isothermal amplification (qLAMP) is a promising technique for the accurate detection of pathogens in organisms and the environment. Here we present a comparative study of the performance of six fluorescent intercalating dyes-SYTO-9, SYTO-13, SYTO-82, SYBR Green I, SYBR Gold, Eva...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/000114432
更新日期:2016-07-01 00:00:00
abstract::The isolation of a single DNA molecule for cloning is technically difficult, and the subsequent screening of colonies for recombinant DNA clones is time consuming. Ion pair-reversed phase HPLC (IP-RP-HPLC) analysis of nucleic acids improves the resolution and isolation of PCR products to be cloned. We demonstrate that...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/00284pf02
更新日期:2000-04-01 00:00:00
abstract::As a strategy to purify recombinant murine Interleukin (IL)-18, we cloned the mature coding region of this protein into the pFLAG-1 expression system. The intent was to use the FLAG peptide "tag" as an amino terminal addition to IL-18 so that purification of this fusion protein (FLAG-IL-18) on anti-FLAG antibody affin...
journal_title:BioTechniques
pub_type:
doi:
更新日期:1998-09-01 00:00:00
abstract::SCORE, a program for computer-assisted scoring of Southern blots of clone DNA, retains the use of expert human judgment while taking over much of the drudgery of the scoring task. The primary functions of the program are to help make an aligned overlay of the fluorescence gel image and the autoradiogram blot image, to...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1991-06-01 00:00:00
abstract::Genotyping fish larvae is a valuable technique for numerous fields of study. While methods for collecting DNA from early stage larvae have been published, a non-lethal, non-invasive genotyping protocol for hatchlings that is amenable to high-throughput approaches is desirable. Here, we describe a method to individuall...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/000114598
更新日期:2017-10-01 00:00:00
abstract::In the quest to move more basic research discoveries into the clinic, the medical community is building training programs to help researchers gain "translational" skills. Sarah Webb explores how PhDs are learning to speak the language of the clinic. ...
journal_title:BioTechniques
pub_type: 新闻
doi:10.2144/000114194
更新日期:2014-08-01 00:00:00
abstract::In this report we present a rapid and inexpensive PCR-based method to screen recombinant DNA libraries. The efficiency of this method was demonstrated by the isolation of clones of interest from three different libraries using different vector systems. This method is nonradioactive and makes it easier to handle a larg...
journal_title:BioTechniques
pub_type:
doi:
更新日期:1994-01-01 00:00:00
abstract::We have developed a novel vector pTCS, as a tool for efficient selection of open reading frame (ORF)-containing inserts. In pTCS clones containing an insert with an ORF a downstream marker gene (immE3, conferring resistance to colicin) is activated via translational coupling with the insert, and transformed cells can ...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/000112629
更新日期:2007-12-01 00:00:00
abstract::Transfection experiments involving mixed cell cultures pose special problems because of differential uptake and expression of DNA by different cell types. In order to evaluate the expression of transfected DNA in primary cultures of embryonic myocardial cells, we have used immunofluorescence microscopy to analyze expr...
journal_title:BioTechniques
pub_type: 杂志文章,评审
doi:
更新日期:1988-07-01 00:00:00
abstract::The purpose of this research was to compare three bioreactor systems for the pilot-scale production of monoclonal antibodies (MAbs). We needed to produce gram quantities of murine MAbs against human prostatic acid phosphatase for use in fragmentation, radiolabeling and in vivo radio-imaging studies. The stable hybrido...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1993-10-01 00:00:00
abstract::Chromosome walking in mammalian DNA by vectorette PCR is not always very specific, and the walks have been limited to distances <1 kb. To improve the method, we have designed new vectorettes, which unlike the currently used ones have very little repetitive sequences or homology with known DNA sequences of various orig...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/04374DD03
更新日期:2004-10-01 00:00:00
abstract::Scanning conductance microscopy investigations were carried out in air on human chromosomes fixed on pre-fabricated SiO2 surfaces with a backgate. The point of the investigation was to estimate the dielectric constant of fixed human chromosomes in order to use it for microfluidic device optimization. The phase shift c...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/000112676
更新日期:2008-02-01 00:00:00
abstract::Genome variation provides researchers with thousands of markers with which to study human demographic history and phenotypes. Insertion-deletion (indel) polymorphism is an important and abundant form of human genome variation, and convenient methods for genotyping indels are therefore needed. Here we evaluate dynamic ...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/03352st01
更新日期:2003-08-01 00:00:00
abstract::We describe a rapid and sensitive method for the detection of nucleotide sequence variation that can be used for large-scale screening of population markers. Denaturing gradient gel electrophoresis (DGGE) detects sequence variants of amplified fragments by the differences in their melting behavior. DGGE detects most s...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/99275rr02
更新日期:1999-11-01 00:00:00
abstract::Patents play an increasingly important role in the dissemination of information in many fast moving fields such as biotechnology and semiconductors. Quite a few new developments are introduced as patents, and only later, if at all, do they find their way into the scientific literature. In spite of this, patents lack w...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1988-02-01 00:00:00
abstract::Previous experiments have clearly demonstrated that microtubule dynamic instability is regulated in living cells, but the molecular mechanisms that are responsible for this regulation are not well understood. We describe two rapid, functional assays that can be used to screen cell extracts for regulators of microtubul...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/98245rr04
更新日期:1998-05-01 00:00:00
abstract::A head-to-tail trimer of the SV40 Bcl I-Bam H1 DNA fragment, specifying polyadenylation of RNA transcripts, was cloned as a cassette flanked by multiple restriction sites. Insertion of the trimer into several expression vectors efficiently prevented spurious expression of reporter genes resulting from transcriptional ...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1989-03-01 00:00:00
abstract::We describe the application of simple cloning by prolonged overlap extension for multiple site-directed mutagenesis in the same plasmid. We show that it is possible to use this technique with very short PCR templates. The technique is ideally suited for the generation of longer donor DNA sequences for CRISPR/Cas9-medi...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/btn-2019-0104
更新日期:2020-06-01 00:00:00
abstract::We have developed an improved subtractive hybridization method that provides a fast, simple and reliable isolation of desired different sequences from two compared DNA libraries, one of which contains all unwanted homologues (subtracter) and another contains certain desired heterologues (tester). The DNA library can b...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/99265rr06
更新日期:1999-05-01 00:00:00
abstract::In order to study quantitative gene expression with Northern blots, it is important to have an internal standard that can be used to verify even loading or to correct for uneven loading between lanes. In this study it is shown that two-dimensional quantitation of ethidium bromide-intercalated 28S rRNA fluorescence can...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1991-12-01 00:00:00
abstract::We describe a general method for making template DNA for sequencing of PCR products. The procedure may be particularly useful for PCR products where minimal sequence information is known or as an alternative to primer walking when sequencing long PCR products. A cassette containing the hybridization site for the M13 s...
journal_title:BioTechniques
pub_type:
doi:
更新日期:1994-11-01 00:00:00
abstract::Plasmid pUC18rspL is a 3.788-kilobase pair vector, derived from pUC18, pKK232-8 and pHSG664, which identifies promoter-bearing DNA fragments functional in StrA E. coli by activation of a promoterless streptomycin-sensitive gene cartridge (rspL). Expression of the plasmid-borne rspL gene leads to sensitivity dominance ...
journal_title:BioTechniques
pub_type: 杂志文章
doi:
更新日期:1990-12-01 00:00:00
abstract::S-palmitoylation (S-acylation) is emerging as an important dynamic post-translational modification of cysteine residues within proteins. Current assays for protein S-palmitoylation involve either in vivo labeling or chemical cleavage of S-palmitoyl groups to reveal a free cysteine sulfhydryl that can be subsequently l...
journal_title:BioTechniques
pub_type: 杂志文章
doi:10.2144/000114516
更新日期:2017-02-01 00:00:00