Gating current harmonics. III. Dynamic transients and steady states with intact sodium inactivation gating.

Abstract:

:Internally perfused squid giant axons with intact sodium inactivation gating were prepared for gating current experiments. Gating current records were obtained in sinusoidally driven dynamic steady states and as dynamic transients as functions of the mean membrane potential and the frequency of the command sinusoid. Controls were obtained after internal protease treatment of the axons that fully removed inactivation. The nonlinear analysis consisted of determining and interpreting the harmonic content in the current records. The results indicate the presence of three kinetic processes, two of which are associated with activation gating (the so-called primary and secondary processes), and the third with inactivation gating. The dynamic steady state data show that inactivation gating does not contribute a component to the gating current, and has no direct voltage-dependence of its own. Rather, the inactivation kinetics appear to be coupled to the primary activation kinetics, and the coupling mechanism appears to be one of reciprocal steric hindrance between two molecular components. The mechanism allows the channel to become inactivated without first entering the conducting state, and will do so in about 40 percent of depolarizing voltage-clamp steps to 0 mV. The derived model kinetics further indicate that the conducting state may flicker between open and closed with the lifetime of either state being 10 microseconds. Dynamic transients generated by the model kinetics (i.e., the behavior of the harmonic components as a function of time after an instantaneous change in the mean membrane potential from a holding potential of -80 mV) match the experimental dynamic transients in all details. These transients have a duration of 7-10 ms (depending on the level of depolarization), and are the result of the developing inactivation following the discontinuous voltage change. A detailed hypothetical molecular model of the channel and gating machinery is presented.

journal_name

Biophys J

journal_title

Biophysical journal

authors

Fohlmeister JF,Adelman WJ Jr

doi

10.1016/S0006-3495(86)83486-5

subject

Has Abstract

pub_date

1986-09-01 00:00:00

pages

489-502

issue

3

eissn

0006-3495

issn

1542-0086

pii

S0006-3495(86)83486-5

journal_volume

50

pub_type

杂志文章
  • Theoretical models for cooperative steady-state ATPase activity of myosin subfragment-1 on regulated actin.

    abstract::Recent theoretical work on the cooperative equilibrium binding of myosin subfragment-1-ADP to regulated actin, as influenced by Ca2+, is extended here to the cooperative steady-state ATPase activity of myosin subfragment-1 on regulated actin. Exact solution of the general steady-state problem will require Monte Carlo ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(81)84777-7

    authors: Hill TL,Eisenberg E,Chalovich JM

    更新日期:1981-07-01 00:00:00

  • Adhesion between human neutrophils and immobilized endothelial ligand vascular cell adhesion molecule 1: divalent ion effects.

    abstract::Integrin-mediated adhesion of circulating neutrophils to endothelium during inflammation involves multiple adhesion molecules on both neutrophils and endothelium. Most studies of neutrophil adhesion have focused on adhesion to ICAM-1 (mediated by beta(2) integrins), but interaction with the endothelial ligand vascular...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2008.10.001

    authors: Lomakina EB,Waugh RE

    更新日期:2009-01-01 00:00:00

  • Searching the Optimal Folding Routes of a Complex Lasso Protein.

    abstract::Understanding how polypeptides can efficiently and reproducibly attain a self-entangled conformation is a compelling biophysical challenge that might shed new light on our general knowledge of protein folding. Complex lassos, namely self-entangled protein structures characterized by a covalent loop sealed by a cystein...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2019.05.025

    authors: Perego C,Potestio R

    更新日期:2019-07-23 00:00:00

  • Weighted-ensemble Brownian dynamics simulations for protein association reactions.

    abstract::A new method, weighted-ensemble Brownian dynamics, is proposed for the simulation of protein-association reactions and other events whose frequencies of outcomes are constricted by free energy barriers. The method features a weighted ensemble of trajectories in configuration space with energy levels dictating the prop...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79552-8

    authors: Huber GA,Kim S

    更新日期:1996-01-01 00:00:00

  • Mechanism for Triggered Waves in Atrial Myocytes.

    abstract::Excitation-contraction coupling in atrial cells is mediated by calcium (Ca) signaling between L-type Ca channels and Ryanodine receptors that occurs mainly at the cell boundary. This unique architecture dictates essential aspects of Ca signaling under both normal and diseased conditions. In this study we apply laser s...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.06.026

    authors: Shiferaw Y,Aistrup GL,Wasserstrom JA

    更新日期:2017-08-08 00:00:00

  • Dual-color time-integrated fluorescence cumulant analysis.

    abstract::We introduce dual-color time-integrated fluorescence cumulant analysis (TIFCA) to analyze fluorescence fluctuation spectroscopy data. Dual-color TIFCA utilizes the bivariate cumulants of the integrated fluorescent intensity from two detection channels to extract the brightness in each channel, the occupation number, a...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.106.086181

    authors: Wu B,Chen Y,Müller JD

    更新日期:2006-10-01 00:00:00

  • Interaction of poly(L-lysine)-g-poly(ethylene glycol) with supported phospholipid bilayers.

    abstract::Interactions between the graft copolymer poly(L-lysine)-g-poly(ethylene glycol), PLL-g-PEG, and two kinds of surface-supported lipidic systems (supported phospholipid bilayers and supported vesicular layers) were investigated by a combination of microscopic and spectroscopic techniques. It was found that the applicati...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.104.041780

    authors: Rossetti FF,Reviakine I,Csúcs G,Assi F,Vörös J,Textor M

    更新日期:2004-09-01 00:00:00

  • Binding modes of μ-conotoxin to the bacterial sodium channel (NaVAb).

    abstract::Polypeptide toxins isolated from the venom of cone snails, known as μ-conotoxins, block voltage-gated sodium channels by physically occluding the ion-conducting pathway. Using molecular dynamics, we show that one subtype of μ-conotoxins, PIIIA, effectively blocks the bacterial voltage-gated sodium channel Na(V)Ab, who...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.12.041

    authors: Chen R,Chung SH

    更新日期:2012-02-08 00:00:00

  • Distinction between changes in membrane potential and surface charge upon chemotactic stimulation of Escherichia coli.

    abstract::Galactose and other chemotactic attractants have been shown to trigger an apparent hyperpolarization in Escherichia coli (Eisenbach, M., 1982, Biochemistry, 21:6818-6825). The probe used to measure membrane potential in that study, tetraphenylphosphonium (TPP+), may respond also to surface-charge changes in the membra...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(84)84169-7

    authors: Eisenbach M,Margolin Y,Ciobotariu A,Rottenberg H

    更新日期:1984-02-01 00:00:00

  • Dynamic force spectroscopy on supported lipid bilayers: effect of temperature and sample preparation.

    abstract::Biological membranes are constantly exposed to forces. The stress-strain relation in membranes determines the behavior of many integral membrane proteins or other membrane related-proteins that show a mechanosensitive behavior. Here, we studied by force spectroscopy the behavior of supported lipid bilayers (SLBs) subj...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.05.039

    authors: Alessandrini A,Seeger HM,Caramaschi T,Facci P

    更新日期:2012-07-03 00:00:00

  • Lipid-cholesterol interactions in the P beta' phase. Application of a statistical mechanical model.

    abstract::We describe a statistical mechanical model for lipid-cholesterol mixtures in the P beta' (ripple) phase of lipid bilayers. The model is a simple extension of an earlier model for the ripple phase in pure lipid bilayers. The extension consists of adding a degree of freedom to allow for the occupation of underlying latt...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(93)81506-6

    authors: Scott HL,McCullough WS

    更新日期:1993-05-01 00:00:00

  • Class A Plexins Are Organized as Preformed Inactive Dimers on the Cell Surface.

    abstract::Plexins are single-pass transmembrane receptors that bind the axon guidance molecules semaphorins. Single-pass transmembrane proteins are an important class of receptors that display a wide variety of activation mechanisms, often involving ligand-dependent dimerization or conformational changes. Resolving the activati...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2015.04.043

    authors: Marita M,Wang Y,Kaliszewski MJ,Skinner KC,Comar WD,Shi X,Dasari P,Zhang X,Smith AW

    更新日期:2015-11-03 00:00:00

  • State vector description of the proliferation of mammalian cells in tissue culture. I. Exponential growth.

    abstract::Proliferation of mammalian cells, even under conditions of unlimited growth, presents a complex problem because of the interaction of deterministic and stochastic processes. Division of the cell cycle into a finite number of parts establishes a multidimensional vector space. In this space an arbitrary culture can be r...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(66)86656-0

    authors: Hahn GM

    更新日期:1966-05-01 00:00:00

  • Molecular dynamics simulations reveal multiple pathways of ligand dissociation from thyroid hormone receptors.

    abstract::Nuclear receptor (NR) ligands occupy a pocket that lies within the core of the NR ligand-binding domain (LBD), and most NR LBDs lack obvious entry/exit routes upon the protein surface. Thus, significant NR conformational rearrangements must accompany ligand binding and release. The precise nature of these processes, h...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.063818

    authors: Martínez L,Sonoda MT,Webb P,Baxter JD,Skaf MS,Polikarpov I

    更新日期:2005-09-01 00:00:00

  • Cell volume measured by total internal reflection microfluorimetry: application to water and solute transport in cells transfected with water channel homologs.

    abstract::Total internal reflection (TIR) microfluorimetry was established as a method to measure continuously the volume of adherent cells and applied to measure membrane permeabilities in cells transfected with water channel homologs. Cytosol was labeled with the membrane-impermeant fluorophore calcein. Fluorescence was excit...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(95)80335-8

    authors: Farinas J,Simanek V,Verkman AS

    更新日期:1995-04-01 00:00:00

  • Dynamics of DNA ejection from bacteriophage.

    abstract::The ejection of DNA from a bacterial virus (i.e., phage) into its host cell is a biologically important example of the translocation of a macromolecular chain along its length through a membrane. The simplest mechanism for this motion is diffusion, but in the case of phage ejection a significant driving force derives ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.070532

    authors: Inamdar MM,Gelbart WM,Phillips R

    更新日期:2006-07-15 00:00:00

  • Glycerol conductance and physical asymmetry of the Escherichia coli glycerol facilitator GlpF.

    abstract::The aquaglyceroporin GlpF is a transmembrane channel of Escherichia coli that facilitates the uptake of glycerol by the cell. Its high glycerol uptake rate is crucial for the cell to survive in very low glycerol concentrations. Although GlpF allows both influx and outflux of glycerol, its structure, similar to the str...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(03)74718-3

    authors: Lu D,Grayson P,Schulten K

    更新日期:2003-11-01 00:00:00

  • Phase transitions in monoglyceride bilayers. A light scattering study.

    abstract::Thermotropic phase transitions in single planar bilayers of glycerol mono-oleate have been investigated using quasi-elastic light scattering from thermally excited membrane fluctuations. In certain cases both spectroscopic and intensity information were derived from the observations. For solvent-free bilayers transiti...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(86)83716-X

    authors: Crawford GE,Earnshaw JC

    更新日期:1986-04-01 00:00:00

  • Focal adhesion kinase stabilizes the cytoskeleton.

    abstract::Focal adhesion kinase (FAK) is a central focal adhesion protein that promotes focal adhesion turnover, but the role of FAK for cell mechanical stability is unknown. We measured the mechanical properties of wild-type (FAKwt), FAK-deficient (FAK-/-), FAK-silenced (siFAK), and siControl mouse embryonic fibroblasts by mag...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.09.043

    authors: Fabry B,Klemm AH,Kienle S,Schäffer TE,Goldmann WH

    更新日期:2011-11-02 00:00:00

  • Structure changes upon deprotonation of the proton release group in the bacteriorhodopsin photocycle.

    abstract::In the photocycle of bacteriorhodopsin at pH 7, a proton is ejected to the extracellular medium during the protonation of Asp-85 upon formation of the M intermediate. The group that releases the ejected proton does not become reprotonated until the prephotolysis state is restored from the N and O intermediates. In con...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.06.022

    authors: Morgan JE,Vakkasoglu AS,Lanyi JK,Lugtenburg J,Gennis RB,Maeda A

    更新日期:2012-08-08 00:00:00

  • Attempts to define functional domains of gap junction proteins with synthetic peptides.

    abstract::To map the binding sites involved in channel formation, synthetic peptides representing sequences of connexin 32 were tested for their ability to inhibit cell-cell channel formation. Both large peptides representing most of the two presumed extracellular loops of connexin32 and shorter peptides representing subsets of...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(94)80663-0

    authors: Dahl G,Nonner W,Werner R

    更新日期:1994-11-01 00:00:00

  • Thermodynamic calculations for biochemical transport and reaction processes in metabolic networks.

    abstract::Thermodynamic analysis of metabolic networks has recently generated increasing interest for its ability to add constraints on metabolic network operation, and to combine metabolic fluxes and metabolite measurements in a mechanistic manner. Concepts for the calculation of the change in Gibbs energy of biochemical react...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2010.09.043

    authors: Jol SJ,Kümmel A,Hatzimanikatis V,Beard DA,Heinemann M

    更新日期:2010-11-17 00:00:00

  • The effects of non-identifiability on testing for detailed balance in aggregated Markov models for ion-channel gating.

    abstract::Aggregated Markov models are a widely used tool to model patch clamp data measured from single ion channels. These channels must obey the principle of detailed balance in thermodynamic equilibrium; otherwise, the channel is driven by an external source of energy. We investigate the power of a likelihood ratio test for...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(00)76529-5

    authors: Wagner M,Timmer J

    更新日期:2000-12-01 00:00:00

  • A continuously variable frequency cross-correlation phase fluorometer with picosecond resolution.

    abstract::A detailed description of the construction and performance of a variable frequency cross-correlation phase fluorometer is reported. The phase fluorometer operates over the frequency range 1-160 MHz with a maximum resolution of a few picoseconds. The effects of distortions introduced by the light modulator and the nonl...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(83)84305-7

    authors: Gratton E,Limkeman M

    更新日期:1983-12-01 00:00:00

  • Molecular dynamics simulations of the ligand-binding domain of the ionotropic glutamate receptor GluR2.

    abstract::Ionotropic glutamate receptors are essential for fast synaptic nerve transmission. Recent x-ray structures for the ligand-binding (S1S2) region of the GluR2 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid (AMPA)-sensitive receptor have suggested how differences in protein/ligand interactions may determine wh...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(02)75430-1

    authors: Arinaminpathy Y,Sansom MS,Biggin PC

    更新日期:2002-02-01 00:00:00

  • Disruption of intrinsic motions as a mechanism for enzyme inhibition.

    abstract::Clostridium difficile (C. diff) is one of the most common and most severe hospital-acquired infections; its consequences range from lengthened hospital stay to outright lethality. C. diff causes cellular damage through the action of two large toxins TcdA and TcdB. Recently, there has been increased effort toward devel...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.05.031

    authors: Swett RJ,Cisneros GA,Feig AL

    更新日期:2013-07-16 00:00:00

  • Oligomerization of membrane-bound diphtheria toxin (CRM197) facilitates a transition to the open form and deep insertion.

    abstract::Diphtheria toxin (DT) contains separate domains for receptor-specific binding, translocation, and enzymatic activity. After binding to cells, DT is taken up into endosome-like acidic compartments where the translocation domain inserts into the endosomal membrane and releases the catalytic domain into the cytosol. The ...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.107.113498

    authors: Kent MS,Yim H,Murton JK,Satija S,Majewski J,Kuzmenko I

    更新日期:2008-03-15 00:00:00

  • Penetratin-membrane association: W48/R52/W56 shield the peptide from the aqueous phase.

    abstract::Using molecular dynamics simulations, we studied the mode of association of the cell-penetrating peptide penetratin with both a neutral and a charged bilayer. The results show that the initial peptide-lipid association is a fast process driven by electrostatic interactions. The homogeneous distribution of positively c...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.104.052787

    authors: Lensink MF,Christiaens B,Vandekerckhove J,Prochiantz A,Rosseneu M

    更新日期:2005-02-01 00:00:00

  • Wavelength dependence of cell cloning efficiency after optical trapping.

    abstract::A study on clonal growth in Chinese hamster ovary (CHO) cells was conducted after exposure to optical trapping wavelengths using Nd:YAG (1064 nm) and tunable titanium-sapphire (700-990 nm) laser microbeam optical traps. The nuclei of cells were exposed to optical trapping forces at various wavelengths, power densities...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79716-3

    authors: Liang H,Vu KT,Krishnan P,Trang TC,Shin D,Kimel S,Berns MW

    更新日期:1996-03-01 00:00:00

  • Force spectroscopy of the double-tethered concanavalin-A mannose bond.

    abstract::We present the measurement of the force required to rupture a single protein-sugar bond using a methodology that provides selective discrimination between specific and nonspecific binding events and helps verify the presence of a single functional molecule on the atomic force microscopy tip. In particular, the interac...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(04)74299-X

    authors: Ratto TV,Langry KC,Rudd RE,Balhorn RL,Allen MJ,McElfresh MW

    更新日期:2004-04-01 00:00:00