Abstract：
:The present paper describes first full genome sequence of the Garlic virus D (GarV-D) from northern India with a genome size of 8425 bp long ssRNA. The infected leaves and bulbs of garlic variety Yamuna Safed (G-282) plants suspected for GarV-D infection were collected with the aim to identify contagion virus during March, 2018. The total RNA was extracted from the pooled garlic plants using TRIzol reagent and sequenced using an Illumina HiSeq 2000 platform. BLASTn search in the NCBI database identified contagion as GarV-D (MK518067). It shared 83.63-85.83% nucleotide sequence identities with other (GarV-D) isolates from Argentina (KF550407, KF555653, KR819505) and 83.15% with isolates from China (MF795136, MF363012). Keywords: Allium sativum; Allexivirus; Garlic virus D; India.
journal_name
Acta Viroljournal_title
Acta virologicaauthors
Singh J,Truong TN,An D,Prajapati MR,Manav A,Quoc NB,A KR,Kumar P,Kumar R,Baranwal VKdoi
10.4149/av_2020_405subject
Has Abstractpub_date
2020-01-01 00:00:00pages
427-432issue
4eissn
0001-723Xissn
1336-2305journal_volume
64pub_type
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