Positive Interactions in the Coral Macro and Microbiome.

Abstract:

:Researchers now recognize the importance of the coral microbiome, but they often overlook other species that live on corals and influence coral-microbe interactions. These 'interstitial associates' should be incorporated into the metaorganism concept for insights into how facilitations between associates, corals, and their microbiomes can be leveraged in ecology and restoration.

journal_name

Trends Microbiol

journal_title

Trends in microbiology

authors

Ainsworth TD,Renzi JJ,Silliman BR

doi

10.1016/j.tim.2020.02.009

subject

Has Abstract

pub_date

2020-08-01 00:00:00

pages

602-604

issue

8

eissn

0966-842X

issn

1878-4380

pii

S0966-842X(20)30045-7

journal_volume

28

pub_type

杂志文章
  • On the facultative requirement of the bacterial RNA chaperone, Hfq.

    abstract::The pleiotropic post-transcriptional regulator Hfq is an RNA chaperone that facilitates pairing interactions between small regulatory RNAs (sRNAs) and their mRNA targets in several bacteria. However, this classical pattern, derived from the Escherichia coli model, is not applicable to the whole bacterial kingdom. In t...

    journal_title:Trends in microbiology

    pub_type: 杂志文章

    doi:10.1016/j.tim.2009.06.003

    authors: Jousselin A,Metzinger L,Felden B

    更新日期:2009-09-01 00:00:00

  • Microbial multidrug-resistance ABC transporters.

    abstract::Multidrug resistance in tumor cells is often caused by the increased efflux of a wide variety of drugs, mediated by P glycoprotein, a member of the superfamily of ATP-binding cassette (ABC) transporters. The genes encoding members of this superfamily have also been isolated from drug-resistant microorganisms, and the ...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/0966-842x(94)90620-3

    authors: Ouellette M,Légaré D,Papadopoulou B

    更新日期:1994-10-01 00:00:00

  • Maximum shields: the assembly and function of the bacterial spore coat.

    abstract::Spores produced by bacilli and clostridia are surrounded by a multilayered protein shell called the coat. As the armor-like appearance of the coat suggests, this structure, along with others within the spore, confers the remarkable resistance properties that make Bacillus anthracis spores such potent biological weapon...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/s0966-842x(02)02373-9

    authors: Driks A

    更新日期:2002-06-01 00:00:00

  • RTX Adhesins are Key Bacterial Surface Megaproteins in the Formation of Biofilms.

    abstract::Gram-negative bacteria produce repeats-in-toxin adhesion proteins (RTX adhesins) to facilitate microbial adhesion. These large, multidomain proteins share a common architecture comprised of four regions. First to emerge from the bacterium, C terminal end leading, is the RTX export sequence that directs the protein thr...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2018.12.003

    authors: Guo S,Vance TDR,Stevens CA,Voets I,Davies PL

    更新日期:2019-05-01 00:00:00

  • The causes and consequences of genetic variation in dengue virus.

    abstract::Despite the fact that dengue is one of the most prevalent viral infections of humans, the mechanisms responsible for its pathogenesis remain uncertain. Evolutionary studies of dengue virus have revealed that its genetic diversity is increasing. This, coupled with evidence that viral strains could naturally differ in v...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/s0966-842x(99)01669-8

    authors: Holmes EC,Burch SS

    更新日期:2000-02-01 00:00:00

  • Two Dietary Metabolites Fuel Salmonella Colonization.

    abstract::Nguyen et al. used transposon sequencing analysis and competitive colonization assays to describe how aspartate/malate can trigger initial Salmonella Typhimurium gut-lumen colonization in mice, providing insight into the significance of certain key metabolites beyond the realm of Salmonella life. Metabolite-driven dia...

    journal_title:Trends in microbiology

    pub_type: 评论,杂志文章

    doi:10.1016/j.tim.2020.06.007

    authors: Jepsen S,Jiang S

    更新日期:2020-09-01 00:00:00

  • The rumen microbial ecosystem--some recent developments.

    abstract::The rumen of sheep and cattle represents a mobile, self-sustaining fermentation system for plant material. Analysis of the rumen flora continues to provide fundamental knowledge of anaerobic microbiology and is now yielding microbial genes that have potential in biotechnology. Recent research has provided fascinating ...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/S0966-842X(97)01159-1

    authors: Flint HJ

    更新日期:1997-12-01 00:00:00

  • Caenorhabditis elegans reveals novel Pseudomonas aeruginosa virulence mechanism.

    abstract::The susceptibility of Caenorhabditis elegans to different virulent phenotypes of Pseudomonas aeruginosa makes the worms an excellent model for studying host-pathogen interactions. Including the recently described liquid killing, five different killing assays are now available offering superb possibilities for performi...

    journal_title:Trends in microbiology

    pub_type: 杂志文章

    doi:10.1016/j.tim.2013.04.006

    authors: Utari PD,Quax WJ

    更新日期:2013-07-01 00:00:00

  • Phage Therapy: Going Temperate?

    abstract::Strictly lytic phages have been consensually preferred for phage therapy purposes. In contrast, temperate phages have been avoided due to an inherent capacity to mediate transfer of genes between bacteria by specialized transduction - an event that may increase bacterial virulence, for example, by promoting antibiotic...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2018.10.008

    authors: Monteiro R,Pires DP,Costa AR,Azeredo J

    更新日期:2019-04-01 00:00:00

  • Multifaceted Roles of TIM-Family Proteins in Virus-Host Interactions.

    abstract::To enhance infection, enveloped viruses exploit adhesion molecules expressed on the surface of host cells. Specifically, phosphatidylserine (PS) receptors - including members of the human T cell immunoglobulin and mucin domain (TIM)-family - have gained attention for their ability to mediate the entry of many envelope...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2019.10.004

    authors: Evans JP,Liu SL

    更新日期:2020-03-01 00:00:00

  • Viral disruption of the blood-brain barrier.

    abstract::The blood-brain barrier (BBB) provides significant protection against microbial invasion of the brain. However, the BBB is not impenetrable, and mechanisms by which viruses breach it are becoming clearer. In vivo and in vitro model systems are enabling identification of host and viral factors contributing to breakdown...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2012.03.009

    authors: Spindler KR,Hsu TH

    更新日期:2012-06-01 00:00:00

  • Light-driven ion-translocating rhodopsins in marine bacteria.

    abstract::Microbial rhodopsins are the photoreceptive membrane proteins found in diverse microorganisms from within Archaea, Eubacteria, and eukaryotes. They have a hep-tahelical transmembrane structure that binds to an all-trans retinal chromophore. Since 2000, thousands of proteorhodopsins, genes of light-driven proton pump r...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2014.10.009

    authors: Inoue K,Kato Y,Kandori H

    更新日期:2015-02-01 00:00:00

  • Supertrees and symbiosis in eukaryote genome evolution.

    abstract::If we took all of the single copy genes in all sequenced genomes, made phylogenetic trees from them individually, and then made the supertree of those trees, what would we get? Recently, David Pisani and colleagues did that experiment and their results are likely to spark much discussion. Their prokaryote tree looks v...

    journal_title:Trends in microbiology

    pub_type: 杂志文章

    doi:10.1016/j.tim.2007.09.001

    authors: Esser C,Martin W

    更新日期:2007-10-01 00:00:00

  • Viruses and autoimmune disease--two sides of the same coin?

    abstract::Some viruses have the ability to modulate the development of autoimmune diseases. Virus infections have long been associated with the exacerbation of autoimmune disease, however, there is also evidence that viruses can actually protect against autoimmune disease. Several experimental models have been developed to inve...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/s0966-842x(01)02097-2

    authors: Fujinami RS

    更新日期:2001-08-01 00:00:00

  • Host Cell Targeting by Enteropathogenic Bacteria T3SS Effectors.

    abstract::Microbial pathogens possess a diversity of weapons that disrupt host homeostasis and immune defenses, thus resulting in the establishment of infection. The best-characterized system mediating bacterial protein delivery into target eukaryotic cells is the type III secretion system (T3SS) expressed by Gram-negative bact...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2018.01.010

    authors: Pinaud L,Sansonetti PJ,Phalipon A

    更新日期:2018-04-01 00:00:00

  • Non-conventional protein secretion in yeast.

    abstract::Many proteins are transported to the cell surface of Saccharomyces cerevisiae and Candida albicans to be either integrated into the cell-wall structure or exported to the external medium. Secretion of many of these proteins through the classical endoplasmic reticulum-Golgi pathway is driven by a canonical N-terminal s...

    journal_title:Trends in microbiology

    pub_type: 杂志文章

    doi:10.1016/j.tim.2005.11.009

    authors: Nombela C,Gil C,Chaffin WL

    更新日期:2006-01-01 00:00:00

  • What did Darwin say about microbes, and how did microbiology respond?

    abstract::Although it is commonly assumed that Darwin had nothing to say about microbes, he did in fact say quite a lot. He included microbes in his Beagle studies of the geographical distribution of organisms and used microscopic organisms as explicit exemplars of how adaptation did not imply increasing complexity. Darwin ofte...

    journal_title:Trends in microbiology

    pub_type: 历史文章,杂志文章

    doi:10.1016/j.tim.2009.05.009

    authors: O'Malley MA

    更新日期:2009-08-01 00:00:00

  • Fleas and smaller fleas: virotherapy for parasite infections.

    abstract::Bacteriophages are viruses of bacteria that are used for controlling bacterial food-borne pathogens and have been proposed for more extensive usage in infection control. Protists are now recognised to harbour viruses and virus-like particles. We propose that investigation of their prevalence in parasites be intensifie...

    journal_title:Trends in microbiology

    pub_type: 杂志文章

    doi:10.1016/j.tim.2013.02.006

    authors: Hyman P,Atterbury R,Barrow P

    更新日期:2013-05-01 00:00:00

  • Emerging therapies for multidrug resistant Acinetobacter baumannii.

    abstract::The global emergence of multidrug resistant Acinetobacter baumannii has reduced the number of clinically available antibiotics that retain activity against this pathogen. For this reason, the development of novel prevention and treatment strategies for infections caused by A. baumannii is necessary. Several studies ha...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2012.12.002

    authors: García-Quintanilla M,Pulido MR,López-Rojas R,Pachón J,McConnell MJ

    更新日期:2013-03-01 00:00:00

  • Antibodies to HIV-1: aiming at the right target.

    abstract::HIV-1 evades antibody-mediated neutralization in many cunning ways. The recent structural characterization of a conserved neutralization epitope on the envelope glycoprotein complex (Env) provides clues to the vulnerabilities of the virus. We discuss these observations and explain their relevance for HIV-1 vaccine des...

    journal_title:Trends in microbiology

    pub_type: 杂志文章

    doi:10.1016/j.tim.2007.05.006

    authors: Eggink D,Melchers M,Sanders RW

    更新日期:2007-07-01 00:00:00

  • Bacterial interplay at intestinal mucosal surfaces: implications for vaccine development.

    abstract::The discovery of 'molecular syringes' in several important gastrointestinal pathogens including Escherichia coli, Salmonella, Shigella and Yersinia, together with a better understanding of M cells and the mucosal immune system, has advanced our appreciation of multistage microorganism-host cell interactions. Recent st...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/s0966-842x(00)01828-x

    authors: Autenrieth IB,Schmidt MA

    更新日期:2000-10-01 00:00:00

  • Animal usage in vaccine development and production: maximising results while minimizing use.

    abstract::The Third International Symposium on Advancing Science and Elimination of the Use of Laboratory Animals for Development and Control of Vaccines and Hormones, organized by the National Institute of Public Health and the Environment (RIVM, The Netherlands) under the auspices of the International Association for Biologic...

    journal_title:Trends in microbiology

    pub_type:

    doi:10.1016/s0966-842x(01)02295-8

    authors: Smith MP,Oyston PC

    更新日期:2002-02-01 00:00:00

  • Type III secretion à la Chlamydia.

    abstract::Type III secretion (T3S) is a mechanism that is central to the biology of the Chlamydiaceae and many other pathogens whose virulence depends on the translocation of toxic effector proteins to cytosolic targets within infected eukaryotic cells. Biomathematical simulations, using a previously described model of contact-...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2007.04.005

    authors: Peters J,Wilson DP,Myers G,Timms P,Bavoil PM

    更新日期:2007-06-01 00:00:00

  • Building the invisible wall: updating the chlamydial peptidoglycan anomaly.

    abstract::The existence of peptidoglycan (PG) in chlamydiae has long been debated. Genome sequencing of members of the Chlamydiaceae family and Protochlamydia amoebophila has uncovered a nearly complete pathway for PG synthesis in these organisms. The recent use of microarray and proteomic analysis methods has revealed that PG ...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2005.12.004

    authors: McCoy AJ,Maurelli AT

    更新日期:2006-02-01 00:00:00

  • Staphylococcus aureus: new evidence for intracellular persistence.

    abstract::Many reports have documented that Staphylococcus aureus can invade host cells and persist intracellularly for various periods of time in cell culture models. However, it is not clear whether intracellular persistence of S. aureus also occurs in the course of infections in whole organisms. This is a subject of intense ...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2008.11.005

    authors: Garzoni C,Kelley WL

    更新日期:2009-02-01 00:00:00

  • The role of CpG dinucleotides in DNA vaccines.

    abstract::DNA vaccines can induce potent humoral and cellular immune responses without any additional adjuvant. Recent studies indicate that unmethylated CpG dinucleotides within DNA vaccines are immune stimulatory and exert an essential endogenous adjuvant activity. These CpG motifs can be added deliberately to DNA or conventi...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/S0966-842X(97)01145-1

    authors: Krieg AM,Yi AK,Schorr J,Davis HL

    更新日期:1998-01-01 00:00:00

  • Prospects for new vaccines against tuberculosis.

    abstract::The spectacular failure of the existing bacille Calmette-Guérin (BCG) vaccine in recent tuberculosis-control trials has prompted a search for potential replacements. Imaginative approaches currently under development include the modulation of BCG by the production of auxotrophic mutants or cytokine-secreting recombina...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/s0966-842x(00)88987-8

    authors: Orme IM

    更新日期:1995-10-01 00:00:00

  • How is the intracellular fate of the Legionella pneumophila phagosome determined?

    abstract::The following pair of articles, the first by Gil Segal and Howard Shuman, and the second by James Kirby and Ralph Isberg (Trends Microbiol. 6, 256-258), explore the genetics and function of the icm/dot genes of Legionella pneumophila. This gene family is implicated in several aspects of virulence and appears to consti...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/s0966-842x(98)01308-0

    authors: Segal G,Shuman HA

    更新日期:1998-07-01 00:00:00

  • Restriction of retroviral replication by APOBEC3G/F and TRIM5alpha.

    abstract::Pathogenic viral infections have exerted selection pressure on their hosts to evolve cellular antiviral inhibitors referred to as restriction factors. Examples of such molecules are APOBEC3G, APOBEC3F and TRIM5alpha. APOBEC3G and APOBEC3F are cytidine deaminases that are able to strongly inhibit retroviral replication...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tim.2008.08.013

    authors: Huthoff H,Towers GJ

    更新日期:2008-12-01 00:00:00

  • p53 and tumour viruses: catching the guardian off-guard.

    abstract::Oncogenic viruses have evolved direct and indirect mechanisms to overcome the tumour suppressor p53. Fortunately, tumour development is limited by the narrow cell tropisms of the viruses concerned and the host immune response. However, such viruses are helping to elucidate the p53 response pathway and may play a futur...

    journal_title:Trends in microbiology

    pub_type: 杂志文章,评审

    doi:10.1016/S0966-842X(96)10083-4

    authors: Neil JC,Cameron ER,Baxter EW

    更新日期:1997-03-01 00:00:00