MassSieve: panning MS/MS peptide data for proteins.

Abstract:

:We present MassSieve, a Java-based platform for visualization and parsimony analysis of single and comparative LC-MS/MS database search engine results. The success of mass spectrometric peptide sequence assignment algorithms has led to the need for a tool to merge and evaluate the increasing data set sizes that result from LC-MS/MS-based shotgun proteomic experiments. MassSieve supports reports from multiple search engines with differing search characteristics, which can increase peptide sequence coverage and/or identify conflicting or ambiguous spectral assignments.

journal_name

Proteomics

journal_title

Proteomics

authors

Slotta DJ,McFarland MA,Markey SP

doi

10.1002/pmic.200900370

subject

Has Abstract

pub_date

2010-08-01 00:00:00

pages

3035-9

issue

16

eissn

1615-9853

issn

1615-9861

journal_volume

10

pub_type

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