Accounting for environmental variation in co-occurrence modelling reveals the importance of positive interactions in root-associated fungal communities.

abstract：:We investigated the use of PCR primers designed to conserved exons within nuclear DNA to amplify potentially variable regions such as introns or hypervariable exons from a wide range of species. We then explored various approaches to assay population-level variation in these PCR products. Primers designed to amplify r...

journal_title：Molecular ecology

authors： Slade RW,Moritz C,Heideman A,Hale PT

更新日期：1993-12-01 00:00:00

abstract：:The use of sequence polymorphism from individual mitochondrial genes to infer past demography has recently proved controversial because of the recurrence of selective sweeps acting over genes and the need for unlinked multilocus data sets. However, comparative analyses using several species for one gene and/or multipl...

journal_title：Molecular ecology

authors： Plouviez S,Shank TM,Faure B,Daguin-Thiebaut C,Viard F,Lallier FH,Jollivet D

更新日期：2009-09-01 00:00:00

abstract：:Microbiologists often evaluate microbial community dynamics by formulating functional hypotheses based on ecological processes. Indeed, many of the methods and terms currently used to describe animal microbiomes derive from ecology and evolutionary biology. As our understanding of the composition and functional dynami...

journal_title：Molecular ecology

authors： McKenney EA,Koelle K,Dunn RR,Yoder AD

更新日期：2018-04-01 00:00:00

abstract：:Widespread species that exhibit both high gene flow and the capacity to occupy heterogeneous environments make excellent models for examining local selection processes along environmental gradients. Here we evaluate the influence of temperature and landscape variables on genetic connectivity and signatures of local ad...

journal_title：Molecular ecology

authors： Yadav S,Stow AJ,Dudaniec RY

更新日期：2019-07-01 00:00:00

abstract：:A phylogeny of mainland eastern Australian scrubwrens (Sericornis citreogularis, S. frontalis, S. keri, S. magnirostris and S. beccarii) was constructed using presence or absence of phylogenetically informative restriction sites in 15 mitochondrial DNA (mtDNA) haplotypes. MtDNA sequence divergences between species wer...

journal_title：Molecular ecology

authors： Joseph L,Moritz C

更新日期：1993-06-01 00:00:00

abstract：:Studying the evolutionary history of trait divergence, in particular those related to dispersal capacity, is of major interest for the process of local adaptation and metapopulation dynamics. Here, we reconstruct the evolution of different alleles at the nuclear-encoded mitochondrial NADP(+)-dependent isocitrate dehyd...

journal_title：Molecular ecology

authors： Van Belleghem SM,Roelofs D,Hendrickx F

更新日期：2015-02-01 00:00:00

abstract：:Spatial patterns of intraspecific variation are shaped by geographical distance among populations, historical changes in gene flow and interactions with local environments. Although these factors are not mutually exclusive and operate on both genomic and phenotypic variation, it is unclear how they affect these two ax...

journal_title：Molecular ecology

authors： Moreira LR,Hernandez-Baños BE,Smith BT

更新日期：2020-08-01 00:00:00

abstract：:Effective population size (N(e)) is a key parameter to understand evolutionary processes and the viability of endangered populations as it determines the rate of genetic drift and inbreeding. Low Ne can lead to inbreeding depression and reduced population adaptability. In this study, we estimated contemporary N(e) usi...

journal_title：Molecular ecology

authors： Baalsrud HT,Saether BE,Hagen IJ,Myhre AM,Ringsby TH,Pärn H,Jensen H

更新日期：2014-06-01 00:00:00

abstract：:Phylogeographical studies are emerging as a powerful tool for understanding the population structure and evolution of wild relatives of crop species. Because of their value as genetic resources, there is great interest in exploring the distribution of variation in wild relatives of cultivated plants. In this study, we...

journal_title：Molecular ecology

authors： Caicedo AL,Schaal BA

更新日期：2004-07-01 00:00:00

abstract：:Inversion polymorphisms are responsible for many ecologically important phenotypes and are often found under balancing selection. However, the same features that ensure their large role in local adaptation-especially reduced recombination between alternate arrangements-mean that uncovering the precise loci within inve...

journal_title：Molecular ecology

authors： Ayala D,Zhang S,Chateau M,Fouet C,Morlais I,Costantini C,Hahn MW,Besansky NJ

更新日期：2019-03-01 00:00:00

abstract：:The California Floristic Province harbours more endemic plant and animal taxa and more identifiable subspecies than any other area of comparable size in North America. We present evidence that physical historical processes have resulted in congruent patterns of genetic diversity over the past 2-10 million years. Using...

journal_title：Molecular ecology

authors： Calsbeek R,Thompson JN,Richardson JE

更新日期：2003-04-01 00:00:00

abstract：:Dispersal is a key factor in invasion and in the persistence and evolution of species. Despite the importance of estimates of dispersal distance, dispersal measurement remains a real methodological challenge. In this study, we characterized dispersal by exploiting a specific case of biological invasion, in which multi...

journal_title：Molecular ecology

authors： Bermond G,Blin A,Vercken E,Ravigné V,Rieux A,Mallez S,Morel-Journel T,Guillemaud T

更新日期：2013-11-01 00:00:00

abstract：:DNA was extracted from five coprolites, excavated in Gypsum Cave, Nevada and radiocarbon dated to approximately 11 000, 20 000 and 28 500 years BP. All coprolites contained mitochondrial DNA sequences identical to a DNA sequence determined from a bone of the extinct ground sloth Nothrotheriops shastensis. A 157-bp fra...

journal_title：Molecular ecology

authors： Hofreiter M,Poinar HN,Spaulding WG,Bauer K,Martin PS,Possnert G,Pääbo S

更新日期：2000-12-01 00:00:00

abstract：:High-latitude ecotonal populations at the species margins may exhibit altered patterns of genetic diversity, resulting from more or less recent founder events and from bottleneck effects in response to climate oscillations. Patterns of genetic diversity were investigated in nine populations of the conifer black spruce...

journal_title：Molecular ecology

authors： Gamache I,Jaramillo-Correa JP,Payette S,Bousquet J

更新日期：2003-04-01 00:00:00

abstract：:Chilo suppressalis (Walker) displays significant geographical differences in ecological preference that may be congruent with patterns of molecular variation. To test this, we collected and analysed 381 individuals of this species from cultivated rice at 18 localities in China during the rice-growing season of 2005-20...

journal_title：Molecular ecology

authors： Meng XF,Shi M,Chen XX

更新日期：2008-06-01 00:00:00

abstract：:Natural selection, random processes and gene flow are known to generate sex ratio variations among sexually polymorphic plant populations. In gynodioecious species, in which hermaphrodites and females coexist, the relative effect of these processes on the maintenance of sex polymorphism is still up for debate. The aim...

journal_title：Molecular ecology

authors： De Cauwer I,Dufay M,Hornoy B,Courseaux A,Arnaud JF

更新日期：2012-02-01 00:00:00

abstract：:Badgers are facultatively social, forming large groups at high density. Group-living appears to have high reproductive costs for females, and may lead to increased levels of inbreeding. The extent of female competition for reproduction has been estimated from field data, but knowledge of male reproductive success and ...

journal_title：Molecular ecology

authors： Carpenter PJ,Pope LC,Greig C,Dawson DA,Rogers LM,Erven K,Wilson GJ,Delahay RJ,Cheeseman CL,Burke T

更新日期：2005-01-01 00:00:00

abstract：:Using the phylogeographic framework, we assessed the DNA sequence variation at the mitochondrial cytochrome b gene across the distribution range of the barbel Barbus barbus, a widely distributed European cyprinid. Reciprocal monophyly of non-Mediterranean European and Balkan/Anatolian populations is taken as evidence ...

journal_title：Molecular ecology

authors： Kotlík P,Berrebi P

更新日期：2001-09-01 00:00:00

abstract：:To obtain further information on the polyploid dynamics of the the Dactylorhiza incarnata/maculata polyploid complex and the origin of the allotetraploid D. sphagnicola (Orchidaceae), plastid DNA variation was studied in 400 plants from from Sweden and elsewhere in Europe and Asia Minor by means of polymerase chain re...

journal_title：Molecular ecology

authors： Hedrén M

更新日期：2003-10-01 00:00:00

abstract：:In an effort to characterize further the patterns of selection and adaptive evolution at the methuselah locus in Drosophila species, we extended an analysis of geographical variation to include single nucleotide polymorphisms (SNPs) in adjacent genes on either side of the mth locus, and examined the molecular variatio...

journal_title：Molecular ecology

authors： Duvernell DD,Schmidt PS,Eanes WF

更新日期：2003-05-01 00:00:00

abstract：:Recent theory has examined the way in which vaccination strategies are expected to influence the evolution of parasite virulence. Most of this work has assumed that vaccination is imposed on a homogeneous host population. However, host populations are typically composed of different types of individuals, with each typ...

journal_title：Molecular ecology

authors： Williams PD,Day T

更新日期：2008-01-01 00:00:00

abstract：:The extinction of the giant tortoises of the Seychelles Archipelago has long been suspected but is not beyond doubt. A recent morphological study of the giant tortoises of the western Indian Ocean concluded that specimens of two native Seychelles species survive in captivity today alongside giant tortoises of Aldabra,...

journal_title：Molecular ecology

authors： Palkovacs EP,Marschner M,Ciofi C,Gerlach J,Caccone A

更新日期：2003-06-01 00:00:00

abstract：:Microbes have evolved ways of interference competition to gain advantage over their ecological competitors. The use of secreted killer toxins by yeast cells through acquiring double-stranded RNA viruses is one such prominent example. Although the killer behaviour has been well studied in laboratory yeast strains, our ...

journal_title：Molecular ecology

authors： Chang SL,Leu JY,Chang TH

更新日期：2015-08-01 00:00:00

abstract：:Phylogeography of Rice yellow mottle virus (RYMV) was reconstructed from the coat protein gene sequences of a selection of 173 isolates from the 14 countries of mainland Africa where the disease occurred and from the full sequences of 16 representative isolates. Genetic variation was linked to geographical distributio...

journal_title：Molecular ecology

authors： Traore O,Sorho F,Pinel A,Abubakar Z,Banwo O,Maley J,Hebrard E,Winter S,Sere Y,Konate G,Fargette D

更新日期：2005-06-01 00:00:00

abstract：:Dispersal plays a prominent role in most conceptual models of community assembly. However, direct measurement of dispersal across a whole community is difficult at ecologically relevant spatial scales. For cryptic organisms, such as fungi and bacteria, the scale and importance of dispersal limitation has become a majo...

journal_title：Molecular ecology

authors： Peay KG,Schubert MG,Nguyen NH,Bruns TD

更新日期：2012-08-01 00:00:00

abstract：:This study presents genetic evidence that whale sharks, Rhincodon typus, are comprised of at least two populations that rarely mix and is the first to document a population expansion. Relatively high genetic structure is found when comparing sharks from the Gulf of Mexico with sharks from the Indo-Pacific. If mixing o...

journal_title：Molecular ecology

authors： Vignaud TM,Maynard JA,Leblois R,Meekan MG,Vázquez-Juárez R,Ramírez-Macías D,Pierce SJ,Rowat D,Berumen ML,Beeravolu C,Baksay S,Planes S

更新日期：2014-05-01 00:00:00

abstract：:Conspecific brood parasitism allows females to exploit other females' nests and enhance their reproductive output. Here, we test a recent theoretical model of how host females gain inclusive fitness from brood parasitism. High levels of relatedness between host and parasitizer can be maintained either by: (a) kin reco...

journal_title：Molecular ecology

authors： Hervey SD,Barnas AF,Stechmann TJ,Rockwell RF,Ellis-Felege SN,Darby BJ

更新日期：2019-11-01 00:00:00

abstract：:The relationships between parasites and their hosts are intimate, dynamic and complex; the evolution of one is inevitably linked to the other. Despite multiple origins of parasitism in the Cnidaria, only parasites belonging to the Myxozoa are characterized by a complex life cycle, alternating between fish and inverteb...

journal_title：Molecular ecology

authors： Holzer AS,Bartošová-Sojková P,Born-Torrijos A,Lövy A,Hartigan A,Fiala I

更新日期：2018-04-01 00:00:00

abstract：:Naturally occurring heat shock (HS) during pupation induces abnormal wing development in Drosophila; we examined factors affecting the severity of this induction. The proportion of HS-surviving adults with abnormal wings varied with HS duration and intensity, and with the pupal age or stage at HS administration. Pretr...

journal_title：Molecular ecology

authors： Williams KD,Helin AB,Posluszny J,Roberts SP,Feder ME

更新日期：2003-05-01 00:00:00

abstract：:Information on genetic structure can be used to complement direct inferences on social systems and behaviour. We studied the genetic structure of the solitary grey mouse lemur (Microcebus murinus), a small, nocturnal primate endemic to western Madagascar, with the aim of getting further insight on its breeding structu...

journal_title：Molecular ecology

authors： Fredsted T,Pertoldi C,Schierup MH,Kappeler PM

更新日期：2005-07-01 00:00:00