Lipid Membranes Influence the Ability of Small Molecules To Inhibit Huntingtin Fibrillization.

Abstract:

:Several diseases, including Alzheimer's disease, Parkinson's disease, and Huntington's disease (HD), are associated with specific proteins aggregating and depositing within tissues and/or cellular compartments. The aggregation of these proteins is characterized by the formation of extended, β-sheet rich fibrils, termed amyloid. In addition, a variety of other aggregate species also form, including oligomers and protofibrils. Specifically, HD is caused by the aggregation of the huntingtin (htt) protein that contains an expanded polyglutamine domain. Due to the link between protein aggregation and disease, small molecule aggregation inhibitors have been pursued as potential therapeutic agents. Two such small molecules are epigallocatechin 3-gallate (EGCG) and curcumin, both of which inhibit the fibril formation of several amyloid-forming proteins. However, amyloid formation is a complex process that is strongly influenced by the protein's environment, leading to distinct aggregation pathways. Thus, changes in the protein's environment may alter the effectiveness of aggregation inhibitors. A well-known modulator of amyloid formation is lipid membranes. Here, we investigated if the presence of lipid vesicles altered the ability of EGCG or curcumin to modulate htt aggregation and influence the interaction of htt with lipid membranes. The presence of 1-palmitoyl-2-oleoyl-glycero-3-phosphocholine or total brain lipid extract vesicles prevented the curcumin from inhibiting htt fibril formation. In contrast, EGCG's inhibition of htt fibril formation persisted in the presence of lipids. Collectively, these results highlight the complexity of htt aggregation and demonstrate that the presence of lipid membranes is a key modifier of the ability of small molecules to inhibit htt fibril formation.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Beasley M,Stonebraker AR,Hasan I,Kapp KL,Liang BJ,Agarwal G,Groover S,Sedighi F,Legleiter J

doi

10.1021/acs.biochem.9b00739

subject

Has Abstract

pub_date

2019-10-29 00:00:00

pages

4361-4373

issue

43

eissn

0006-2960

issn

1520-4995

journal_volume

58

pub_type

杂志文章
  • Clonal analysis of the glycosylation of immunoglobulin G secreted by murine hybridomas.

    abstract::A panel of 10 hybridomas was assembled to assess the influence of various genetic and biological factors upon glycosylation of secreted monoclonal IgG. After exhaustive Pronase digestion of IgG, glycopeptides were characterized chromatographically by apparent size, charge, and concanavalin A (Con A)-Sepharose and Lens...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00429a065

    authors: Rothman RJ,Warren L,Vliegenthart JF,Härd KJ

    更新日期:1989-02-07 00:00:00

  • Multiple secondary structure rearrangements during HIV-1 RNA dimerization.

    abstract::HIV-1 RNA dimerization is a complex process that involves a series of RNA refolding events. The monomeric RNA can adopt two alternative conformations that largely determine the efficiency of dimerization. The dimeric RNA also exists in two different conformations, an initial kissing-loop complex and a stable dimer wit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi025993n

    authors: Huthoff H,Berkhout B

    更新日期:2002-08-20 00:00:00

  • Characterization of a cloned human dihydrotestosterone/androstanediol UDP-glucuronosyltransferase and its comparison to other steroid isoforms.

    abstract::A human cDNA, UDPGTh-3, encoding a dihydrotestosterone/5 alpha-androstane-3 alpha,17 beta-diol UDP- glucuronosyltransferase (transferase) has been isolated and characterized. The nucleotide sequence of UDPGTh-3 encodes a 530 amino acid protein with a typical membrane insertion-signal peptide, a membrane-anchoring doma...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00091a015

    authors: Chen F,Ritter JK,Wang MG,McBride OW,Lubet RA,Owens IS

    更新日期:1993-10-12 00:00:00

  • Probing the heme axial ligation in the CO-sensing CooA protein with magnetic circular dichroism spectroscopy.

    abstract::The combination of UV/visible/near-IR variable-temperature magnetic circular dichroism (VTMCD) and EPR spectroscopies has been used to investigate the spin states and axial ligation of the heme group in oxidized, reduced, and CO-bound reduced forms of the Rhodospirillum rubrum CO oxidation transcriptional activator pr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991303c

    authors: Dhawan IK,Shelver D,Thorsteinsson MV,Roberts GP,Johnson MK

    更新日期:1999-09-28 00:00:00

  • A Cu(I)-sensing ArsR family metal sensor protein with a relaxed metal selectivity profile.

    abstract::ArsR (or ArsR/SmtB) family metalloregulatory homodimeric repressors collectively respond to a wide range of metal ion inducers in regulating homeostasis and resistance of essential and nonessential metal ions in bacteria. BxmR from the cyanobacterium Osciliatoria brevis is the first characterized ArsR protein that sen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi801313y

    authors: Liu T,Chen X,Ma Z,Shokes J,Hemmingsen L,Scott RA,Giedroc DP

    更新日期:2008-10-07 00:00:00

  • Structural Snapshots of an Engineered Cystathionine-γ-lyase Reveal the Critical Role of Electrostatic Interactions in the Active Site.

    abstract::Enzyme therapeutics that can degrade l-methionine (l-Met) are of great interest as numerous malignancies are exquisitely sensitive to l-Met depletion. To exhaust the pool of methionine in human serum, we previously engineered an l-Met-degrading enzyme based on the human cystathionine-γ-lyase scaffold (hCGL-NLV) to cir...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b01172

    authors: Yan W,Stone E,Zhang YJ

    更新日期:2017-02-14 00:00:00

  • Energetics of coiled coil folding: the nature of the transition states.

    abstract::Coiled coils are simple models for studying the association of two polypeptide chains to form a folded protein. Previous work has shown that the folding of a coiled coil can be described by a two-state transition between two unfolded monomeric peptide chains and a folded coiled coil dimer. Here we report the thermodyn...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi002161l

    authors: Bosshard HR,Dürr E,Hitz T,Jelesarov I

    更新日期:2001-03-27 00:00:00

  • Purification, characterization, and substrate and inhibitor structure-activity studies of rat liver FAD-AMP lyase (cyclizing): preference for FAD and specificity for splitting ribonucleoside diphosphate-X into ribonucleotide and a five-atom cyclic phospho

    abstract::An enzyme with FAD-AMP lyase (cyclizing) activity, splitting FAD to AMP and riboflavin 4',5'-phosphate (cFMN), was recently identified [Fraiz, F., et al. (1998) Biochem. J. 330, 881-888]. Now, it has been purified to apparent homogeneity from a rat liver supernatant, by a procedure that includes affinity for ADP-agaro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0157159

    authors: Cabezas A,Pinto RM,Fraiz F,Canales J,González-Santiago S,Cameselle JC

    更新日期:2001-11-13 00:00:00

  • Rhodamine 123 binds to multiple sites in the multidrug resistance protein (MRP1).

    abstract::The mechanisms of MRP1-drug binding and transport are not clear. In this study, we have characterized the interaction between MRP1 and rhodamine 123 (Rh123) using the photoreactive-iodinated analogue, [(125)I]iodoaryl azido-rhodamine 123 (or IAARh123). Photoaffinity labeling of plasma membranes from HeLa cells transfe...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0020574

    authors: Daoud R,Kast C,Gros P,Georges E

    更新日期:2000-12-19 00:00:00

  • Interaction of LDS-751 with P-glycoprotein and mapping of the location of the R drug binding site.

    abstract::One cause of multidrug resistance is the overexpression of P-glycoprotein, a 170 kDa plasma membrane ABC transporter, which functions as an ATP-driven efflux pump with broad specificity for hydrophobic drugs, peptides, and natural products. The protein appears to interact with its substrates within the membrane enviro...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0485326

    authors: Lugo MR,Sharom FJ

    更新日期:2005-01-18 00:00:00

  • NMR solution structure of the N3' --> P5' phosphoramidate duplex d(CGCGAATTCGCG)2 by the iterative relaxation matrix approach.

    abstract::High-resolution 2D NMR spectra of the duplex CGCGAATTCGCG with deoxyribose sugars but with the normal phosphodiester linker replaced by an N3' --> P5' phosphoramidate (NP) group have been used to establish a solution structure for the duplex. Distance, angle, and base pair hydrogen-bonding constraints were used to ref...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980711y

    authors: Ding D,Gryaznov SM,Wilson WD

    更新日期:1998-09-01 00:00:00

  • Interspersion of mouse satellite deoxyribonucleic acid sequences.

    abstract::DNA sequences with homology to the major (A + T)-rich mouse satellite component were localized in CsCl gradients by hybridization with a labeled satellite cRNA probe. Although, as expected, most of the hybridization was to DNA in the satellite-rich shoulder, substantial radioactive cRNA hybridized with DNA from denser...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00518a025

    authors: Stambrook PJ

    更新日期:1981-07-21 00:00:00

  • Identification of the phosphoribulokinase sugar phosphate binding domain.

    abstract::A recombinant form of Rhodobacter sphaeroides phosphoribulokinase (form I; NADH dependent) has been expressed in and purified to homogeneity from Escherichia coli that harbor the prkA gene in the plasmid pKP1565b. Restriction digestion of the phosphoribulokinase-encoding plasmid produces a tractable 450 bp fragment th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00129a022

    authors: Sandbaken MG,Runquist JA,Barbieri JT,Miziorko HM

    更新日期:1992-04-14 00:00:00

  • Circular substrates of the hammerhead ribozyme shift the internal equilibrium further toward cleavage.

    abstract::To test whether the Y-shaped conformation of the hammerhead ribozyme is maintained throughout the catalytic pathway, the cleavage properties of circular substrates which bind the ribozyme through helices I and II were determined. Constraining the position of helices I and II in this manner did not significantly alter ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980307z

    authors: Stage-Zimmermann TK,Uhlenbeck OC

    更新日期:1998-06-30 00:00:00

  • Calcium-induced structural transition in the regulatory domain of human cardiac troponin C.

    abstract::While calcium binding to troponin C (TnC) triggers the contraction of both skeletal and cardiac muscle, there is clear evidence that different mechanisms may be involved. For example, activation of heart myofilaments occurs with binding to a single regulatory site on TnC, whereas activation of fast skeletal myofilamen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971223d

    authors: Spyracopoulos L,Li MX,Sia SK,Gagné SM,Chandra M,Solaro RJ,Sykes BD

    更新日期:1997-10-07 00:00:00

  • Molecular characterization of the catalytic domains of human complement serine protease C1r.

    abstract::Limited cleavages of human C1r by extrinsic proteases of various specificity (plasmin, elastase, chymotrypsin, thermolysin) yield dimeric associations of two globular domains, each comprised of the intact B chain disulfide linked to gamma, the C-terminal fragment of the A chain. These (gamma-B)2 domains, which are hom...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00366a029

    authors: Arlaud GJ,Gagnon J,Villiers CL,Colomb MG

    更新日期:1986-09-09 00:00:00

  • Chemical tools for K(+) channel biology.

    abstract::K(+) channels are revered for their universal action of suppressing electrical activity in nerve and muscle, as well as regulating salt and water transport in epithelial tissues involved in metabolism and digestion. These multisubunit membrane-embedded proteins carry out their physiological chore, selectively allowing...

    journal_title:Biochemistry

    pub_type: 杂志文章,评审

    doi:10.1021/bi8018515

    authors: Ahern CA,Kobertz WR

    更新日期:2009-01-27 00:00:00

  • Stability and reversibility of higher ordered structure of interphase chromatin: continuity of deoxyribonucleic acid is not required for maintenance of folded structure.

    abstract::The organization of the higher order structure of chromatin has been examined in chicken erythrocyte. Chromatin solubilized during the time course of a gentle micrococcal nuclease digestion of nuclei shows a continuous variation in the distribution of molecular weights. Electron microscopy studies of large chromatin f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00553a002

    authors: Ruiz-Carrillo A,Puigdomènech P,Eder G,Lurz R

    更新日期:1980-06-10 00:00:00

  • Intramolecular proton transfer from multiple sites in catalysis by murine carbonic anhydrase V.

    abstract::The hydration of CO2 catalyzed by carbonic anhydrase requires proton transfer from the zinc-bound water at the active site to solution for each cycle of catalysis. In the most efficient of the mammalian carbonic anhydrases, isozyme II, this transfer is facilitated by a proton shuttle residue, His 64. Murine carbonic a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9729209

    authors: Earnhardt JN,Qian M,Tu C,Laipis PJ,Silverman DN

    更新日期:1998-05-19 00:00:00

  • Use of a photoactivated ruthenium dimer complex to measure electron transfer between the Rieske iron-sulfur protein and cytochrome c(1) in the cytochrome bc(1) complex.

    abstract::Electron transfer between the Rieske iron-sulfur protein (Fe(2)S(2)) and cytochrome c(1) was studied using the ruthenium dimer, Ru(2)D, to either photoreduce or photooxidize cytochrome c(1) within 1 micros. Ru(2)D has a charge of +4, which allows it to bind with high affinity to the cytochrome bc(1) complex. Flash pho...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi000003o

    authors: Sadoski RC,Engstrom G,Tian H,Zhang L,Yu CA,Yu L,Durham B,Millett F

    更新日期:2000-04-18 00:00:00

  • NMR determination of pKa values for Asp, Glu, His, and Lys mutants at each variable contiguous enzyme-inhibitor contact position of the turkey ovomucoid third domain.

    abstract::From the larger set of 191 variants at all the variable contact positions in the turkey ovomucoid third domain, we selected a subset that consists of Asp, Glu, His, and Lys residues at eight of the nine contiguous P6-P3' positions (residues 13-21), the exception being P3-Cys16 which is involved in a conserved disulfid...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0269512

    authors: Song J,Laskowski M Jr,Qasim MA,Markley JL

    更新日期:2003-03-18 00:00:00

  • Studies of individual amino acid residues of the decapeptide tyrocidine A by proton double-resonance difference spectroscopy in the correlation mode.

    abstract::The cyclic decapeptide antibiotic tyrocidine A was studied by two relatively new methods, viz., correlation proton magnetic resonance (pmr) spectroscopy and double-resonance difference pmr spectroscopy. The correlation method of spectral accumulation provided pmr spectra of good resolution, and in addition the signal-...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00673a032

    authors: Gibbons WA,Beyer CF,Dadok J,Sprecher RF,Wyssbrod HR

    更新日期:1975-01-28 00:00:00

  • Aminophosphonate inhibitors of dialkylglycine decarboxylase: structural basis for slow binding inhibition.

    abstract::The kinetics of inhibition of dialkylglycine decarboxylase by five aminophosphonate inhibitors are presented. Two of these [(R)-1-amino-1-methylpropanephosphonate and (S)-1-aminoethanephosphonate] are slow binding inhibitors. The inhibitors follow a mechanism in which a weak complex is rapidly formed, followed by slow...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi026318g

    authors: Liu W,Rogers CJ,Fisher AJ,Toney MD

    更新日期:2002-10-15 00:00:00

  • Structural basis of heme reactivity in myoglobin and leghemoglobin: thermal difference spectra.

    abstract::Thermal pertubation difference spectra of sperm whale myoglobin (Mb) and soybean leghemoglobin a (Lb a) in the near-ultraviolet reveal similarities in the tryptophan environment of the two proteins. Of the two tryptophans in each protein, one has its indolyl NH group fully exposed to aqueous solvent, while the other b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00620a009

    authors: Nicola NA,Leach SJ

    更新日期:1977-01-11 00:00:00

  • Reactions of 4-oxalocrotonate tautomerase and YwhB with 3-halopropiolates: analysis and implications.

    abstract::4-Oxalocrotonate tautomerase (4-OT) and YwhB, a 4-OT homologue found in Bacillus subtilis, exhibit a low level hydratase activity that converts trans-3-haloacrylates to acetaldehyde, presumably through a malonate semialdehyde intermediate. The mechanism for the initial transformation of the 3-haloacrylate to malonate ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035495u

    authors: Wang SC,Johnson WH Jr,Czerwinski RM,Whitman CP

    更新日期:2004-01-27 00:00:00

  • DNA photolyase repairs the trans-syn cyclobutane thymine dimer.

    abstract::DNA photolyases catalyze the splitting of the cyclobutane ring joining the two dihydropyrimidines of a pyrimidine dimer by a photoinduced electron-transfer reaction. Previous studies concluded that photolyase repairs only the cis-syn form of the eight stereoisomers of the cyclobutane pyrimidine dimer (Pyr[ ]Pyr). In t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00079a001

    authors: Kim ST,Malhotra K,Smith CA,Taylor JS,Sancar A

    更新日期:1993-07-20 00:00:00

  • Direct interaction of the inhibitory gamma-subunit of Rod cGMP phosphodiesterase (PDE6) with the PDE6 GAFa domains.

    abstract::Retinal rod and cone cGMP phosphodiesterases (PDE6 family) function as the effector enzyme in the vertebrate visual transduction cascade. The activity of PDE6 catalytic subunits is controlled by the Pgamma-subunits. In addition to the inhibition of cGMP hydrolysis at the catalytic sites, Pgamma is known to stimulate a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi015935m

    authors: Muradov KG,Granovsky AE,Schey KL,Artemyev NO

    更新日期:2002-03-26 00:00:00

  • Characterization of putative polyphosphoinositide binding motifs from phospholipase C beta 2.

    abstract::Several phosphatidylinositol 4,5-bisphosphate (PtdInsP2)-regulated actin-binding proteins and most phosphoinositide-specific phospholipases C (PI-PLCs) comprise a basic amino acid motif (KxxxKxKK, where x denotes any amino acid), which was previously suggested to represent a PtdInsP2-binding site commonly present in t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00015a023

    authors: Simões AP,Reed J,Schnabel P,Camps M,Gierschik P

    更新日期:1995-04-18 00:00:00

  • Importance of phosphatidylethanolamine for association of protein kinase C and other cytoplasmic proteins with membranes.

    abstract::Biological membranes exhibit an asymmetric distribution of phospholipids. Phosphatidylserine (PS) is an acidic phospholipid that is found almost entirely on the interior of the cell where it is important for interaction with many cellular components. A less well understood phenomenon is the asymmetry of the neutral ph...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00119a022

    authors: Bazzi MD,Youakim MA,Nelsestuen GL

    更新日期:1992-02-04 00:00:00

  • Characterization of the macrolide P-450 hydroxylase from Streptomyces venezuelae which converts narbomycin to picromycin.

    abstract::The post-polyketide synthase (PKS) biosynthetic tailoring of macrolide antibiotics usually involves one or more oxidation reactions catalyzed by cytochrome P450 monooxygenases. As the specificities of members from this class of enzymes vary significantly among PKS gene clusters, the identification and study of new mac...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi981699c

    authors: Betlach MC,Kealey JT,Ashley GW,McDaniel R

    更新日期:1998-10-20 00:00:00