Analysis of the complete genome sequence of two Korean sacbrood viruses in the Honey bee, Apis mellifera.

Abstract:

:The complete genomic RNAs of two Korean sacbrood virus (SBV) strains, which infect the honey bee, Apis mellifera, were sequenced. The two sequences (AmSBV-Kor19, AmSBV-Kor21) were distinguished by the presence or absence of a PstI restriction site. These strains comprised of 8784 bp and 8835 bp; contained a single large ORF (179-8707 and 179-8758) encoding 2843 and 2860 amino acids, respectively. Deduced amino acid sequences comparison with some insect viruses showed that regions of helicase, protease and RdRp domains; structural genes were located at the 5' end and non-structural genes at the 3' end. Multiple sequence alignment showed that AmSBV-Kor19 was missing a section between nucleotides 2311 and 2361 (present in SBV-UK and CSBV) but was similar to that of the Korean SBV strain that infects A. cerana (AcSBV-Kor). The differences in the AmSBV-Kor19 strain may be the result of the virus adapting to a different host.

journal_name

Virology

journal_title

Virology

authors

Choe SE,Nguyen LT,Noh JH,Kweon CH,Reddy KE,Koh HB,Chang KY,Kang SW

doi

10.1016/j.virol.2012.06.008

subject

Has Abstract

pub_date

2012-10-10 00:00:00

pages

155-61

issue

1

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(12)00309-1

journal_volume

432

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • Molecular and serological characterization of SARS-CoV-2 infection among COVID-19 patients.

    abstract:BACKGROUND:SARS-CoV-2 is a novel coronavirus and the cause of COVID-19. More than 80% of COVID-19 patients exhibit mild or moderate symptoms. In this study, we investigated the dynamics of viral load and antibodies against SARS-CoV-2 in a longitudinal cohort of COVID-19 patients with severe and mild/moderate diseases. ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2020.09.008

    authors: Li L,Liang Y,Hu F,Yan H,Li Y,Xie Z,Huang L,Zhao J,Wan Z,Wang H,Shui J,Cai W,Tang S

    更新日期:2020-12-01 00:00:00

  • Partial purification and characterization of Cucumber necrosis virus and Tomato bushy stunt virus RNA-dependent RNA polymerases: similarities and differences in template usage between tombusvirus and carmovirus RNA-dependent RNA polymerases.

    abstract::Tombusviruses are small, plus-sense, single-stranded RNA viruses of plants. RNA-dependent RNA polymerases (RdRp) of two tombusviruses, Tomato bushy stunt virus (TBSV) and Cucumber necrosis virus (CNV), have been partially purified from infected Nicotiana benthamiana plants. The obtained RdRp complexes are capable of d...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2000.0577

    authors: Nagy PD,Pogany J

    更新日期:2000-10-25 00:00:00

  • Rhesus angiotensin converting enzyme 2 supports entry of severe acute respiratory syndrome coronavirus in Chinese macaques.

    abstract::Angiotensin converting enzyme 2 (ACE2) is the receptor that severe acute respiratory syndrome coronavirus (SARS-CoV) utilizes for target cell entry and, therefore, plays an important role in SARS pathogenesis. Since Chinese rhesus (rh) macaques do not usually develop SARS after SARS-CoV infection, it has been suggeste...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.08.016

    authors: Chen Y,Liu L,Wei Q,Zhu H,Jiang H,Tu X,Qin C,Chen Z

    更新日期:2008-11-10 00:00:00

  • Immune-based resistance to the formation of v-src-induced distal tumors.

    abstract::Although v-src, the oncogene of Rous sarcoma virus, has been shown to be capable of inducing lethal tumors at visceral sites distal to the primary tumor mass, the mechanisms opposing visceral tumor formation remain to be elucidated. In the present study, we show that visceral tumors, many of which represent a metastas...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1617

    authors: Halpern MS,Wisner TW,Brown IP,England JM

    更新日期:1993-11-01 00:00:00

  • The intracellular sites of early replication and budding of SARS-coronavirus.

    abstract::In this study, we analyzed the replication and budding sites of severe acute respiratory syndrome coronavirus (SARS-CoV) at early time points of infection. We detected cytoplasmic accumulations containing the viral nucleocapsid protein, viral RNA and the non-structural protein nsp3. Using EM techniques, we found that ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.11.027

    authors: Stertz S,Reichelt M,Spiegel M,Kuri T,Martínez-Sobrido L,García-Sastre A,Weber F,Kochs G

    更新日期:2007-05-10 00:00:00

  • Successful protection by amantadine hydrochloride against lethal encephalitis caused by a highly neurovirulent recombinant influenza A virus in mice.

    abstract::A mouse model system for a lethal encephalitis due to influenza has been established by stereotaxic microinjection with the recombinant R404BP strain of influenza A virus into the olfactory bulb of C57BL/6 mice. The virus infection spread selectively to neurons in nuclei of the broad areas of the brain parenchyma that...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1601

    authors: Mori I,Liu B,Hossain MJ,Takakuwa H,Daikoku T,Nishiyama Y,Naiki H,Matsumoto K,Yokochi T,Kimura Y

    更新日期:2002-11-25 00:00:00

  • The measles virus phosphoprotein interacts with the linker domain of STAT1.

    abstract::The measles virus (MV) phosphoprotein (P) and V proteins block the interferon (IFN) response by impeding phosphorylation of the signal transducer and activator of transcription 1 (STAT1) by the Janus kinase 1 (JAK1). We characterized how STAT1 mutants interact with P and JAK1 phosphorylation. Certain mutants of the li...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2013.06.019

    authors: Devaux P,Priniski L,Cattaneo R

    更新日期:2013-09-01 00:00:00

  • Intranasal IgG4/7 antibody responses protect horses against equid herpesvirus-1 (EHV-1) infection including nasal virus shedding and cell-associated viremia.

    abstract::Equid herpesvirus-1 (EHV-1) outbreaks continue despite widely used vaccination. We demonstrated previously that an ORF1/ORF71 gene deletion mutant of the EHV-1 strain Ab4 (Ab4ΔORF1/71) is less virulent than its parent Ab4 virus. Here, we describe the Ab4 challenge infection evaluating protection induced by the Ab4ΔORF...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2019.03.014

    authors: Perkins G,Babasyan S,Stout AE,Freer H,Rollins A,Wimer CL,Wagner B

    更新日期:2019-05-01 00:00:00

  • Cloning and characterization of antiviral cytotoxic T lymphocytes in channel catfish, Ictalurus punctatus.

    abstract::To determine the role of piscine anti-viral cytotoxic cells, we analyzed the response of channel catfish to Ictalurid herpesvirus 1, commonly designated channel catfish virus (CCV). Peripheral blood leukocytes (PBL) from catfish immunized with MHC-matched, CCV-infected G14D cells (G14D-CCV) showed marked lysis of G14D...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2019.11.014

    authors: Taylor EB,Chinchar VG,Quiniou SMA,Wilson M,Bengtén E

    更新日期:2020-01-15 00:00:00

  • Characterization of Japanese encephalitis virus envelope protein expressed by recombinant baculoviruses.

    abstract::Recombinant baculoviruses containing the coding sequences of the viral structural proteins, i.e., the capsid (C) protein, the precursor to premembrane (preM) protein, and the envelope (E) protein, as well as a nonstructural protein, NS1, of Japanese encephalitis virus (JEV) were constructed. Infection of Spodoptera fr...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90580-1

    authors: Matsuura Y,Miyamoto M,Sato T,Morita C,Yasui K

    更新日期:1989-12-01 00:00:00

  • Genetic characterization of an adapted pandemic 2009 H1N1 influenza virus that reveals improved replication rates in human lung epithelial cells.

    abstract::The 2009 influenza pandemic originated from a swine-origin H1N1 virus, which, although less pathogenic than anticipated, may acquire additional virulence-associated mutations in the future. To estimate the potential risk, we sequentially passaged the isolate A/Hamburg/04/2009 in A549 human lung epithelial cells. After...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2016.02.002

    authors: Wörmann X,Lesch M,Welke RW,Okonechnikov K,Abdurishid M,Sieben C,Geissner A,Brinkmann V,Kastner M,Karner A,Zhu R,Hinterdorfer P,Anish C,Seeberger PH,Herrmann A,Meyer TF,Karlas A

    更新日期:2016-05-01 00:00:00

  • Modified HIV envelope proteins with enhanced binding to neutralizing monoclonal antibodies.

    abstract::The target for neutralizing antibodies against human immunodeficiency virus (HIV) is the trimeric Env protein on the native virion. Conserved neutralizing epitopes of receptor binding sites are located in the recessed core of the Env protein, partially masked by glycosylations and variable loops. In this study, we hav...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2004.10.005

    authors: Kang SM,Quan FS,Huang C,Guo L,Ye L,Yang C,Compans RW

    更新日期:2005-01-05 00:00:00

  • The flavonoid apigenin inhibits hepatitis C virus replication by decreasing mature microRNA122 levels.

    abstract::Despite recent progress in the development of direct-acting antivirals against hepatitis C virus (HCV), chronic HCV infection remains an important health burden worldwide. MicroRNA122 (miR122), a liver-specific microRNA (miRNA), positively regulates HCV replication, and systemic application of antisense oligonucleotid...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.05.024

    authors: Shibata C,Ohno M,Otsuka M,Kishikawa T,Goto K,Muroyama R,Kato N,Yoshikawa T,Takata A,Koike K

    更新日期:2014-08-01 00:00:00

  • Analysis of a baculovirus lacking a functional viral fibroblast growth factor homolog.

    abstract::Baculoviruses encode fibroblast growth factor (vfgf) homologs whose function during virus infection is unknown. We constructed a recombinant bacmid of Autographa californica M nucleopolyhedrovirus (AcMNPV) lacking a functional vfgf and characterized it in two insect cell lines. The kinetics of budded virus production ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.01.016

    authors: Detvisitsakun C,Hutfless EL,Berretta MF,Passarelli AL

    更新日期:2006-03-15 00:00:00

  • Adenovirus E1A proteins are closely associated with chromatin in productively infected and transformed cells.

    abstract::The adenovirus E1A 243R oncoprotein encodes a potent transcription-repression function within the N-terminal 80 amino acids. Our proposed model of E1A repression predicts that E1A interacts with important cellular proteins on chromatin. Consistent with this idea, we report here that E1A proteins from in vivo formaldeh...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2007.10.021

    authors: Green M,Panesar NK,Loewenstein PM

    更新日期:2008-02-05 00:00:00

  • Comparative analysis of the roles of simian immunodeficiency and bovine leukemia virus matrix proteins in Gag assembly in insect cells.

    abstract::The role of the matrix (MA) domain of simian immunodeficiency virus (SIV) and bovine leukaemia virus (BLV) Gag in the assembly of virus-like particles (VLP) in insect cells has been investigated. Wild-type SIV and BLV Gag assembled to form discrete VLP structures typical of many retroviruses analysed by similar system...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1441

    authors: Kakker NK,Mikhailov MV,Jones IM,Roy P

    更新日期:2002-07-20 00:00:00

  • AIDS-associated retroviruses (ARV) can productively infect other cells besides human T helper cells.

    abstract::We have examined the host range of AIDS-associated retroviruses (ARV) that are known to infect human T cells of the helper subset. We have observed that the virus cannot infect fibroblast and epithelial cell lines of many different animal species. It is infectious and replicates efficiently in peripheral mononuclear c...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90146-1

    authors: Levy JA,Shimabukuro J,McHugh T,Casavant C,Stites D,Oshiro L

    更新日期:1985-12-01 00:00:00

  • Rift Valley fever virus NSS gene expression correlates with a defect in nuclear mRNA export.

    abstract::We investigated the localization of host mRNA during Rift Valley fever virus (RVFV) infection. Fluorescence in situ hybridization revealed that infection with RVFV altered the localization of host mRNA. mRNA accumulated in the nuclei of RVFV-infected but not mock-infected cells. Further, overexpression of the NSS gene...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2015.09.003

    authors: Copeland AM,Van Deusen NM,Schmaljohn CS

    更新日期:2015-12-01 00:00:00

  • Simvastatin and oseltamivir combination therapy does not improve the effectiveness of oseltamivir alone following highly pathogenic avian H5N1 influenza virus infection in mice.

    abstract::Nonspecific anti-inflammatory drugs have been purported to reduce the burden of severe influenza disease. We demonstrate that, unlike oseltamivir administration, simvastatin administration did not reduce morbidity, mortality, or viral load of mice infected with H1N1 or H5N1 viruses. No added benefit to the efficacy of...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2013.01.017

    authors: Belser JA,Szretter KJ,Katz JM,Tumpey TM

    更新日期:2013-04-25 00:00:00

  • Cytosine deamination and selection of CpG suppressed clones are the two major independent biological forces that shape codon usage bias in coronaviruses.

    abstract::Using the complete genome sequences of 19 coronavirus genomes, we analyzed the codon usage bias, dinucleotide relative abundance and cytosine deamination in coronavirus genomes. Of the eight codons that contain CpG, six were markedly suppressed. The mean NNU/NNC ratio of the six amino acids using either NNC or NNU as ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2007.08.010

    authors: Woo PC,Wong BH,Huang Y,Lau SK,Yuen KY

    更新日期:2007-12-20 00:00:00

  • Loss of dimerisation of the nonstructural protein NS1 of Kunjin virus delays viral replication and reduces virulence in mice, but still allows secretion of NS1.

    abstract::The flavivirus nonstructural protein NS1 has been implicated in viral RNA replication, although its precise role has not been identified. In its native state NS1 exists as a heat labile homodimer that is thought to be required for NS1 function and secretion. However, we have recently identified a cDNA clone of KUN vir...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1999.9956

    authors: Hall RA,Khromykh AA,Mackenzie JM,Scherret JH,Khromykh TI,Mackenzie JS

    更新日期:1999-11-10 00:00:00

  • Rapid in vivo induction of HIV-specific CD8+ cytotoxic T lymphocytes by a 15-amino acid unmodified free peptide from the immunodominant V3-loop of GP120.

    abstract::Efforts to generate a vaccine to prevent infection by human immunodeficiency virus (HIV) have focused on inducing neutralizing antibodies. However, cytotoxic T-lymphocyte (CTL) responses are a major immune defense mechanism required for recovery from many different virus infections. Since CTL epitopes can be defined b...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90504-i

    authors: Sastry KJ,Nehete PN,Venkatnarayanan S,Morkowski J,Platsoucas CD,Arlinghaus RB

    更新日期:1992-06-01 00:00:00

  • Molecular basis for naturally occurring elevated readthrough transcription across the M-F junction of the paramyxovirus SV5.

    abstract::Transcription of the paramyxovirus RNA genome is thought to involve a sequential stop-start mechanism whereby monocistronic mRNAs are produced by polyadenylation and termination of 3' upstream gene followed by reinitiation at the downstream start site. For a number of paramyxoviruses, transcription across the M-F gene...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9266

    authors: Rassa JC,Parks GD

    更新日期:1998-08-01 00:00:00

  • Reduced antigenicity of the hepatitis B virus HBsAg protein arising as a consequence of sequence changes in the overlapping polymerase gene that are selected by lamivudine therapy.

    abstract::The prevalence of hepatitis B virus vaccine escape mutants has increased as a consequence of the introduction of global vaccination programs. Furthermore and as a consequence of the organization of the genome of hepatitis B virus (HBV) into overlapping reading frames, the selection of polymerase mutants during long-te...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1246

    authors: Torresi J,Earnest-Silveira L,Deliyannis G,Edgtton K,Zhuang H,Locarnini SA,Fyfe J,Sozzi T,Jackson DC

    更新日期:2002-02-15 00:00:00

  • A DEAD box protein facilitates HIV-1 replication as a cellular co-factor of Rev.

    abstract::HIV-1 Rev escorts unspliced viral mRNAs out of the nucleus of infected cells, which allows formation of infectious HIV-1 virions. We have identified a putative DEAD box (Asp-Glu-Ala-Asp) RNA helicase, DDX1, as a cellular co-factor of Rev, through yeast and mammalian two-hybrid systems using the N-terminal motif of Rev...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2004.09.039

    authors: Fang J,Kubota S,Yang B,Zhou N,Zhang H,Godbout R,Pomerantz RJ

    更新日期:2004-12-20 00:00:00

  • The complete genomic sequence of lytic bacteriophage gh-1 infecting Pseudomonas putida--evidence for close relationship to the T7 group.

    abstract::The genome of the lytic Pseudomonas putida bacteriophage gh-1 is linear double-stranded DNA containing 37,359 bp with 216-bp direct terminal repeats. Like other members of the T7 group, the gh-1 genome contains regions of high homology to T7 interspersed with nonhomologous regions that contain small open reading frame...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(03)00124-7

    authors: Kovalyova IV,Kropinski AM

    更新日期:2003-07-05 00:00:00

  • Origin of the hemagglutinin gene of H3N2 influenza viruses from pigs in China.

    abstract::Influenza viruses of the H3N2 subtype similar to Aichi/2/68 and Victoria/3/75 persist in pigs many years after their antigenic counterparts have disappeared from humans (Shortridge et al. (1977). Science 19, 1454-1455). To provide information on the mechanism of conservation of these influenza viruses in pigs, the hem...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90405-9

    authors: Kida H,Shortridge KF,Webster RG

    更新日期:1988-01-01 00:00:00

  • The evolution of porcine reproductive and respiratory syndrome virus: quasispecies and emergence of a virus subpopulation during infection of pigs with VR-2332.

    abstract::GP5, the principal envelope glycoprotein of porcine reproductive and respiratory syndrome virus (PRRSV), contains a hypervariable region within the ectodomain which is responsible for generating diversity in field isolates. The purpose of this study was to gain insight into the possible origin of this diversity by fol...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1999.9789

    authors: Rowland RR,Steffen M,Ackerman T,Benfield DA

    更新日期:1999-07-05 00:00:00

  • Expression of the vesicular stomatitis virus nucleocapsid protein gene in Escherichia coli: analysis of its biological activity in vitro.

    abstract::The nucleocapsid (N) protein genes of vesicular stomatitis virus, serotypes New Jersey and Indiana, were expressed in Escherichia coli BL21(DE3) transformed by the recombinant expression vector pET-3a containing N genes under the control of the T7 RNA polymerase promoter. Following induction with isopropylthiogalactop...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1130

    authors: Das T,Banerjee AK

    更新日期:1993-03-01 00:00:00

  • A variant of CRPV DNA preferentially maintained as a plasmid in NIH 3T3 cells and characterization of its transcripts in nude mouse tumors.

    abstract::Rabbit and human papillomaviruses are strictly epitheliotropic and their DNA replicates extrachromosomally in benign lesions (warts) of their natural host. Their tissue and host specificity is thought to be genetically controlled and may account for the inefficiency in transforming heterologous cells. In our hands, CR...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(87)90149-8

    authors: Nasseri M,Wettstein FO

    更新日期:1987-12-01 00:00:00