4-Locus high-resolution HLA allele and haplotype frequencies in admixed population from Nicaragua.

Abstract:

:A total of 155 Nicaraguan Mestizos from across the country were genotyped at high-resolution for the human leukocyte antigen loci HLA-A, -B, -C, and -DRB1 using sequence-based typing methods. The respective allele and extended haplotype frequencies, as well as Hardy-Weinberg proportions were calculated. The most frequent extended haplotype identified was A*24:02:01-B*40:02:01-C*03:05-DRB1*04:07:01G, with an estimated frequency of 2.26%. No deviation from Hardy-Weinberg Equilibrium was detected at any of the loci studied. The HLA genotypic data of the population sample reported here are available publicly in the Allele Frequencies Net Database under the population name "Nicaragua Mestizo" and the identifier AFN3610.

journal_name

Hum Immunol

journal_title

Human immunology

authors

Arrieta-Bolaños E,Madrigal-Sánchez JJ,Stein JE,Moreira-Espinoza MJ,Paredes-Carias E,Vanegas-Padilla Y,Salazar-Sánchez L,Madrigal JA,Marsh SGE,Shaw BE

doi

10.1016/j.humimm.2019.05.004

subject

Has Abstract

pub_date

2019-07-01 00:00:00

pages

417-418

issue

7

eissn

0198-8859

issn

1879-1166

pii

S0198-8859(19)30457-4

journal_volume

80

pub_type

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