Microbial transformation and sorption of anthracene in liquid culture.

Abstract:

:Armillaria sp. F022, a white-rot fungus isolated from decayed wood in tropical rain forest was used to biodegrade anthracene in cultured medium. The percentage of anthracene removal by Armillaria sp. F022 reached 13 % after 7 days and at the end of the experiment, anthracene removal level was at 87 %. The anthracene removal through sorption and transformation was investigated. 69 % of eliminated anthracene was transformed by Armillaria sp. F022 to form other organic structure, while only 18 % was absorbed in the mycelia. In the kinetic experiment, anthracene dissipation will not stop even though the biomass had stopped growing. Anthracene removal by Armillaria sp. F022 was correlated with protein concentration (whole biomass) in the culture. The production of enzyme was affected by biomass production. Anthracene was transformed to two stable metabolic products. The metabolites were extracted in ethyl-acetate, isolated by column chromatography, and then identified using gas chromatography-mass spectrometry (GC-MS).

journal_name

Bioprocess Biosyst Eng

authors

Hadibarata T,Zubir MM,Rubiyatno,Chuang TZ

doi

10.1007/s00449-012-0850-x

subject

Has Abstract

pub_date

2013-09-01 00:00:00

pages

1229-33

issue

9

eissn

1615-7591

issn

1615-7605

journal_volume

36

pub_type

杂志文章
  • Hydrogen sulfide formation as well as ethanol production in different media by cysND- and/or cysIJ-inactivated mutant strains of Zymomonas mobilis ZM4.

    abstract::Many bacteria reduce inorganic sulfate to sulfide to satisfy their need for sulfur, one of the most important elements for biological life. But little is known about the metabolic pathways involving hydrogen sulfide (H₂S) in mesophilic bacteria. By genomic sequence analysis, a complete set of genes for the assimilator...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0839-5

    authors: Tan T,Liu C,Liu L,Zhang K,Zou S,Hong J,Zhang M

    更新日期:2013-10-01 00:00:00

  • Effect of pH on the stability of Pleurotus eryngii versatile peroxidase during heterologous production in Emericella nidulans.

    abstract::Complementary DNA (cDNA) encoding the new versatile peroxidase from the ligninolytic basidiomycete Pleurotus eryngii has been expressed in the ascomycete Emericella nidulans. In recombinant E. nidulans cultures, the pH reached values as high as 8.3, correlating with a sharp decrease in peroxidase activity. Peroxidase ...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-004-0365-1

    authors: Lú-Chau TA,Ruiz-Dueñas FJ,Camarero S,Feijoo G,Martínez MJ,Lema JM,Martínez AT

    更新日期:2004-10-01 00:00:00

  • Quantitative metabolic flux analysis revealed uneconomical utilization of ATP and NADPH in Acremonium chrysogenum fed with soybean oil.

    abstract::A metabolic network was constructed for the Acremonium chrysogenum cultivation fed with soybean oil. Metabolic flux analysis indicated that the shift from exponential growth to rapid cephalosporin C (CPC) formation was accompanied by 1.63- and 5-fold carbon flux enlargement in TCA cycle and glyoxylate by-pass, respect...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-010-0439-1

    authors: Li J,Yang Y,Chu J,Huang M,Li L,Zhang X,Wang Y,Zhuang Y,Zhang S

    更新日期:2010-11-01 00:00:00

  • Effects of carbon sources and feeding strategies on heparosan production by Escherichia coli K5.

    abstract::This work aimed to develop an optimal carbon source feeding strategy to achieve maximal production of heparosan as a precursor of bioengineered heparin by Escherichia coli K5. Glycerol gave higher heparosan titer and productivity compared to glucose. The maximum heparosan production (187 mg/L) and heparosan productivi...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0708-2

    authors: Liu Y,Liu L,Chen J,Li J,Du G,Chen J

    更新日期:2012-09-01 00:00:00

  • Combining De Ley-Doudoroff and methylerythritol phosphate pathways for enhanced isoprene biosynthesis from D-galactose.

    abstract::An engineered Escherichia coli strain was developed for enhanced isoprene production using D-galactose as substrate. Isoprene is a valuable compound that can be biosynthetically produced from pyruvate and glyceraldehyde-3-phosphate (G3P) through the methylerythritol phosphate pathway (MEP). The Leloir and De Ley-Doudo...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-014-1228-z

    authors: Ramos KR,Valdehuesa KN,Liu H,Nisola GM,Lee WK,Chung WJ

    更新日期:2014-12-01 00:00:00

  • Production and separation of dipeptidyl peptidase IV from Lactococcus lactis: scale up for industrial production.

    abstract::Lactococcus lactis spp. lactis and Lactococcus lactis spp. cremoris are widely used in the manufacture of fermented milk. These strains were compared for production of Dipeptidyl Peptidase IV (DPP IV) enzyme in terms of enzyme activity, specific growth rates and productivity. Lactococcus lactis spp. lactis was produce...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0730-4

    authors: Ustün O,Ongen G

    更新日期:2012-10-01 00:00:00

  • Use of the effluent from biogas production for cultivation of Spirulina.

    abstract::The effluent from the biogas process was tested as a nutrient source during cultivation of the protein-rich and edible microalgae Spirulina (Arthrospira platensis) and compared with conventional Spirulina medium. Equal biomass production was observed until late exponential phase and no significant differences could be...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1726-2

    authors: Hultberg M,Lind O,Birgersson G,Asp H

    更新日期:2017-04-01 00:00:00

  • Immobilization of horseradish peroxidase onto kaolin.

    abstract::Kaolin showed as a very perspective carrier for the enzyme immobilization and it was used for the adsorption of horseradish peroxidase (HRP). The effects of the enzyme concentration and pH on the immobilization efficiency were studied in the reaction with pyrogallol and anthraquinone dye C.I. Acid Violet 109 (AV 109)....

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-015-1529-x

    authors: Šekuljica NŽ,Prlainović NŽ,Jovanović JR,Stefanović AB,Djokić VR,Mijin DŽ,Knežević-Jugović ZD

    更新日期:2016-03-01 00:00:00

  • Optimization of the microbial synthesis of dihydroxyacetone from glycerol with Gluconobacter oxydans.

    abstract::An optimized repeated-fed-batch fermentation process for the synthesis of dihydroxyacetone (DHA) from glycerol utilizing Gluconobacter oxydans is presented. Cleaning, sterilization, and inoculation procedures could be reduced significantly compared to the conventional fed-batch process. A stringent requirement was tha...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-003-0338-9

    authors: Hekmat D,Bauer R,Fricke J

    更新日期:2003-12-01 00:00:00

  • High-level soluble and functional expression of Trigonopsis variabilis D-amino acid oxidase in Escherichia coli.

    abstract::D-Amino acid oxidase is an important biocatalyst used in a variety of fields, and its economically justified level recombinant expression in Escherichia coli has not been established. To accomplish this, after a single Phe54Tyr substitution, fusion proteins of D-amino acid oxidase from Trigonopsis variabilis (TvDAO) w...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-013-1123-z

    authors: Deng S,Su E,Ma X,Yang S,Wei D

    更新日期:2014-08-01 00:00:00

  • Two-stage pH control combined with oxygen-enriched air strategies for the highly efficient production of EPA by Mortierella alpina CCFM698 with fed-batch fermentation.

    abstract::Dissolved oxygen and pH are critical factors influencing cell growth and metabolism. In our previous work, we constructed the recombinant strain Mortierella alpina CCFM698, which has the ability to produce EPA at room temperature. However, our experiments showed that the dissolved oxygen produced by the aeration and a...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-020-02367-9

    authors: Huang M,Chen H,Tang X,Lu H,Zhao J,Zhang H,Chen Y,Chen W

    更新日期:2020-09-01 00:00:00

  • Population heterogeneity in microbial bioprocesses: origin, analysis, mechanisms, and future perspectives.

    abstract::Population heterogeneity is omnipresent in all bioprocesses even in homogenous environments. Its origin, however, is only so well understood that potential strategies like bet-hedging, noise in gene expression and division of labour that lead to population heterogeneity can be derived from experimental studies simulat...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章,评审

    doi:10.1007/s00449-018-1922-3

    authors: Heins AL,Weuster-Botz D

    更新日期:2018-07-01 00:00:00

  • Regulation of docosahexaenoic acid production by Schizochytrium sp.: effect of nitrogen addition.

    abstract::Docosahexaenoic acid (DHA) percentage in total fatty acids (TFAs) is an important index in DHA microbial production. In this study, the change of DHA percentage in response to fermentation stages and the strategies to increase DHA percentage were investigated. Two kinds of conventional nitrogen sources, monosodium glu...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-013-1057-5

    authors: Ren LJ,Sun LN,Zhuang XY,Qu L,Ji XJ,Huang H

    更新日期:2014-05-01 00:00:00

  • Gluconic acid production from sucrose in an airlift reactor using a multi-enzyme system.

    abstract::Sucrose from sugarcane is produced in abundance in Brazil, which provides an opportunity to manufacture other high-value products. Gluconic acid (GA) can be produced by multi-enzyme conversion of sucrose using the enzymes invertase, glucose oxidase, and catalase. In this process, one of the byproducts is fructose, whi...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-014-1306-2

    authors: Mafra AC,Furlan FF,Badino AC,Tardioli PW

    更新日期:2015-04-01 00:00:00

  • Enhancement of extracellular pullulanase production from recombinant Escherichia coli by combined strategy involving auto-induction and temperature control.

    abstract::Pullulanase was extracellularly produced with an engineered Escherichia coli with a combined strategy. When auto-induction instead of isopropyl β-D-1-thiogalactopyranoside (IPTG) induction method was implemented, we observed increased extracellular activity (4.2 U ml(-1)) and cell biomass (7.95 g DCW l(-1)). Subsequen...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-013-1026-z

    authors: Chen WB,Nie Y,Xu Y,Xiao R

    更新日期:2014-04-01 00:00:00

  • Product formation kinetics in genetically modified E. coli bacteria: inclusion body formation.

    abstract::A data-driven model is presented that can serve two important purposes. First, the specific growth rate and the specific product formation rate are determined as a function of time and thus the dependency of the specific product formation rate from the specific biomass growth rate. The results appear in form of traine...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-007-0161-9

    authors: Gnoth S,Jenzsch M,Simutis R,Lübbert A

    更新日期:2008-01-01 00:00:00

  • Immobilized Kluyveromyces marxianus cells in carboxymethyl cellulose for production of ethanol from cheese whey: experimental and kinetic studies.

    abstract::Cheese whey fermentation to ethanol using immobilized Kluyveromyces marxianus cells was investigated in batch and continuous operation. In batch fermentation, the yeast cells were immobilized in carboxymethyl cellulose (CMC) polymer and also synthesized graft copolymer of CMC with N-vinyl-2-pyrrolidone, denoted as CMC...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1610-0

    authors: Roohina F,Mohammadi M,Najafpour GD

    更新日期:2016-09-01 00:00:00

  • Modelling the growth kinetics of Kocuria marina DAGII as a function of single and binary substrate during batch production of β-Cryptoxanthin.

    abstract::In the present investigation, growth kinetics of Kocuria marina DAGII during batch production of β-Cryptoxanthin (β-CRX) was studied by considering the effect of glucose and maltose as a single and binary substrate. The importance of mixed substrate over single substrate has been emphasised in the present study. Diffe...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1678-6

    authors: Mitra R,Chaudhuri S,Dutta D

    更新日期:2017-01-01 00:00:00

  • Foaming control by automatic carbon source adjustment using an ORP profile in sequencing batch reactors for enhanced nitrogen removal in swine wastewater treatment.

    abstract::Incomplete denitrification and ammonia accumulation were found to cause proliferation of filamentous microorganisms in sequencing batch reactors (SBRs) for swine wastewater treatment. Foaming was observed in response to the accumulation of 115.2 and 12.2 mg/L of nitrate and ammonia, respectively. The mixed liquor susp...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-009-0332-y

    authors: Chen M,Kim JH,Yang M,Wang Y,Kishida N,Kawamura K,Sudo R

    更新日期:2010-03-01 00:00:00

  • Plasmid DNA primary recovery from E. coli lysates by depth bed microfiltration.

    abstract::Recently, several studies have been published on the application of plasmid DNA (pDNA) in gene therapy and vaccine production. The bioprocess to obtain pDNA involves the steps of fermentation, primary recovery, secondary recovery and final purification. The pDNA primary recovery, which is the key step to the rest of t...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-015-1351-5

    authors: Padilla-Zamudio A,Guerrero-Germán P,Tejeda-Mansir A

    更新日期:2015-06-01 00:00:00

  • Whole cell bioconversion of vitamin D3 to calcitriol using Pseudonocardia sp. KCTC 1029BP.

    abstract::Calcitriol is an important drug used for treating osteoporosis, which can be produced from vitamin D3. The current method of producing calcitriol from vitamin D3 during cultivation of microbial cells results in low yields of calcitriol and high purification costs. Therefore, in this study, the steps of cell cultivatio...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-015-1368-9

    authors: Kang DJ,Im JH,Kang JH,Kim KH

    更新日期:2015-07-01 00:00:00

  • Identification of reaction networks for bioprocesses: determination of a partially unknown pseudo-stoichiometric matrix.

    abstract::In this paper we propose a methodology to determine the structure of the pseudo-stoichiometric coefficient matrix K in a mass balance-based model and to identify its coefficients from a set of available data. The first stage consists in estimating the number of reactions that must be taken into account to represent th...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-005-0407-3

    authors: Bernard O,Bastin G

    更新日期:2005-08-01 00:00:00

  • A systematic correlation analysis of carotenoids, chlorophyll, non-pigmented cell mass, and cell number for the blueprint of Dunaliella salina culture in a photobioreactor.

    abstract::Microalgal carotenoids are attractive health ingredients, but their production should be optimized to improve cost-effectiveness. Understanding cellular physiology centered on carotenoid synthesis is the prerequisite for this work. Therefore, systematic correlation analyses were conducted among chlorophyll, carotenoid...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-018-1957-5

    authors: Song HG,Byeon SY,Chung GY,Jung SM,Choi JI,Shin HS

    更新日期:2018-09-01 00:00:00

  • Bioprocessing of wheat and paddy straw for their nutritional up-gradation.

    abstract::Solid-state bioprocessing of agricultural residues seems to be an emerging and effective method for the production of high quality animal feed. Seven strains of white-rot fungi were selected to degrade wheat and paddy straw (PS) under solid-state conditions. Degradation of different components, i.e., hemicellulose, ce...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-013-1116-y

    authors: Sharma RK,Arora DS

    更新日期:2014-07-01 00:00:00

  • Accelerated start-up of moving bed biofilm reactor by using a novel suspended carrier with porous surface.

    abstract::A novel suspended carrier with porous surface was firstly prepared by coating a sponge on the inside and outside of a hard polyethylene ring. Herein the effects of the sponge thickness (0, 2, 4, 6 mm) and pore size (17, 45, 85 pores per inch, ppi) on the performance of the start-up stage in moving bed biofilm reactor ...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-014-1266-6

    authors: Chen X,Kong L,Wang X,Tian S,Xiong Y

    更新日期:2015-02-01 00:00:00

  • Esterification of polyglycerol with polycondensed ricinoleic acid catalysed by immobilised Rhizopus oryzae lipase.

    abstract::The enzymatic method for synthesising polyglycerol polyricinoleate (PGPR), a food additive named E-476, was successfully carried out in the presence of immobilised Rhizopus oryzae lipase in a solvent-free medium. The great advantage of using the commercial preparation of R. oryzae lipase is that it is ten times cheape...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-012-0874-2

    authors: Ortega S,Máximo MF,Montiel MC,Murcia MD,Arnold G,Bastida J

    更新日期:2013-09-01 00:00:00

  • Kinetics of carbendazim degradation in a horizontal tubular biofilm reactor.

    abstract::The fungicide carbendazim is an ecotoxic agent affecting aquatic biota. Due to its suspected hormone-disrupting effects, it is considered a "priority hazard substance" by the Water Framework Directive of the European Commission, and its degradation is of major concern. In this work, a horizontal tubular biofilm reacto...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1717-3

    authors: Alvarado-Gutiérrez ML,Ruiz-Ordaz N,Galíndez-Mayer J,Santoyo-Tepole F,Curiel-Quesada E,García-Mena J,Ahuatzi-Chacón D

    更新日期:2017-04-01 00:00:00

  • Evaluation of ethanol production and bioadsorption of heavy metals by various red seaweeds.

    abstract::The objective of this study was to evaluate ethanol production and bioadsorption with four red seaweeds, Gelidium amansii, Gracilaria verrucosa, Kappaphycus alvarezii and Eucheuma denticulatum. To produce ethanol, thermal acid hydrolysis, enzymatic saccharification and fermentation was carried out. After pretreatment,...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1571-3

    authors: Sunwoo IY,Ra CH,Jeong GT,Kim SK

    更新日期:2016-06-01 00:00:00

  • Influence of oxygen transfer on Pseudomonas putida effects on growth rate and biodesulfurization capacity.

    abstract::The growth rate and desulfurization capacity accumulated by the cells during the growth of Pseudomonas putida KTH2 under different oxygen transfer conditions in a stirred and sparged tank bioreactor have been studied. Hydrodynamic conditions were changed using different agitation conditions. During the culture, severa...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-016-1536-6

    authors: Escobar S,Rodriguez A,Gomez E,Alcon A,Santos VE,Garcia-Ochoa F

    更新日期:2016-04-01 00:00:00

  • Efficient bioconversion of rice straw to ethanol with TiO2/UV pretreatment.

    abstract::Rice straw is a lignocellulosic biomass that constitutes a renewable organic substance and alternative source of energy; however, its structure confounds the liberation of monosaccharides. Pretreating rice straw using a TiO(2)/UV system facilitated its hydrolysis with Accellerase 1000(™), suggesting that hydroxyl radi...

    journal_title:Bioprocess and biosystems engineering

    pub_type: 杂志文章

    doi:10.1007/s00449-011-0589-9

    authors: Kang HK,Kim D

    更新日期:2012-01-01 00:00:00