Heavy metal driven co-selection of antibiotic resistance in soil and water bodies impacted by agriculture and aquaculture.

abstract：:Soft rot caused by numerous species of Pectobacterium and Dickeya is a serious threat to the world production of potatoes. The application of bacteriophages to combat bacterial infections in medicine, agriculture, and the food industry requires the selection of comprehensively studied lytic phages and the knowledge of...

journal_title：Frontiers in microbiology

authors： Lukianova AA,Shneider MM,Evseev PV,Shpirt AM,Bugaeva EN,Kabanova AP,Obraztsova EA,Miroshnikov KK,Senchenkova SN,Shashkov AS,Toschakov SV,Knirel YA,Ignatov AN,Miroshnikov KA

更新日期：2020-01-23 00:00:00

abstract：:The family Marseilleviridae, defined as a group of icosahedral double-stranded DNA viruses with particle size of approximately 250 nm and genome size of 350-380 kbp, belongs to the nucleo-cytoplasmic family of large DNA viruses. The family Marseilleviridae is currently classified into lineages A-E. In this study, we i...

journal_title：Frontiers in microbiology

authors： Aoki K,Hagiwara R,Akashi M,Sasaki K,Murata K,Ogata H,Takemura M

更新日期：2019-05-24 00:00:00

abstract：:Proteae, and especially Proteus mirabilis, are often the cause of urinary tract infections (UTIs) in humans. They were reported as carriers of extended-spectrum β-lactamase (ESBL) genes, and recently of carbapenemases, mostly carried by the Salmonella genomic island 1 (SGI1) and Proteus genomic island 1 (PGI1). Protea...

journal_title：Frontiers in microbiology

authors： Schultz E,Cloeckaert A,Doublet B,Madec JY,Haenni M

更新日期：2017-01-19 00:00:00

abstract：:Recently, novel variants of H5 highly pathogenic avian influenza viruses (AIVs) have been frequently isolated from poultry and wild birds in Asia, Europe and North America. Live poultry markets (LPMs) play an important role in the dissemination of influenza viruses. Four H5N2 AIVs were isolated from poultry during sur...

journal_title：Frontiers in microbiology

authors： Wu H,Lu R,Peng X,Peng X,Cheng L,Liu F,Wu N

更新日期：2017-04-25 00:00:00

abstract：:Microbial biofilms in gravity-driven membrane (GDM) filtration systems can efficiently degrade the cyanotoxin microcystin (MC), but it is unclear if this function depends on the presence of MC-producing cyanobacteria in the source water habitat. We assessed the removal of MC from added Microcystis aeruginosa biomass i...

journal_title：Frontiers in microbiology

authors： Silva MOD,Desmond P,Derlon N,Morgenroth E,Pernthaler J

更新日期：2019-04-18 00:00:00

abstract：:Cilia are highly conserved organelles present in almost all types of eukaryotic cells, and defects in cilia structure and/or function are related to many human genetic disorders. Single-celled ciliated protists, which possess diverse types of cilia, are remarkable model organisms for studying cilia structures and func...

journal_title：Frontiers in microbiology

authors： Tang D,Wang X,Dong J,Li Y,Gao F,Xie H,Zhao C

更新日期：2020-10-19 00:00:00

abstract：:A popular pre-harvest strategy to mitigate aflatoxin contamination of corn involves field application of non-aflatoxigenic strains of Aspergillus flavus. The basis of this biological control may involve multiple factors, but competitive displacement of aflatoxigenic strains by the biocontrol strains is a likely mechan...

journal_title：Frontiers in microbiology

authors： Weaver MA,Abbas HK

更新日期：2019-08-07 00:00:00

abstract：:Baiyunbian baijiu, the most popular miscellaneous-flavor baijiu in China, has been widely consumed for decades. Similar to many Chinese baijiu, Baiyunbian baijiu is fermented in five successive batches every year. Sensory analysis demonstrated that the raw baijiu obtained from the last two fermentation batches always ...

journal_title：Frontiers in microbiology

authors： Liu P,Miao L

更新日期：2020-01-31 00:00:00

abstract：:Cichlid fishes, with their repeated colonization of lakes and subsequent radiations at different scales of phylogenetic and ecological diversification, offer an excellent model system to understand the factors shaping the host-gut microbiota association in nature. Here, we characterized the gut microbiota of the Amphi...

journal_title：Frontiers in microbiology

authors： Baldo L,Riera JL,Salzburger W,Barluenga M

更新日期：2019-10-15 00:00:00

abstract：:A large number of viral and bacterial organisms are responsible for community-acquired pneumonia (CAP) which contributes to substantial burden on health management. A new resequencing microarray (RPM-IVDC1) associated with targeted multiplex PCR was recently developed and validated for multiple respiratory viruses det...

journal_title：Frontiers in microbiology

authors： Shen H,Zhu B,Wang S,Mo H,Wang J,Li J,Zhang C,Zeng H,Guan L,Shi W,Zhang Y,Ma X

更新日期：2015-05-28 00:00:00

abstract：:Bdellovibrio bacteriovorus is a predatory bacterium that feeds upon and proliferates inside other Gram-negative bacteria. Upon entry into the periplasmic space of the prey envelope, B. bacteriovorus initiates an exquisite developmental program in which it digests the host resources and grows as a filament, which event...

journal_title：Frontiers in microbiology

authors： Laloux G

更新日期：2020-01-21 00:00:00

abstract：:Human campylobacteriosis is considered one of the most common foodborne diseases worldwide with poultry identified as the main source of infection accounting for 50-80% of human cases. Highly virulent Campylobacter spp., positive for the Type VI secretion system (T6SS), which have an increased ability to adhere to and...

journal_title：Frontiers in microbiology

authors： Sima F,Stratakos AC,Ward P,Linton M,Kelly C,Pinkerton L,Stef L,Gundogdu O,Lazar V,Corcionivoschi N

更新日期：2018-09-07 00:00:00

abstract：:Innovations in next-generation sequencing technology have introduced new avenues in microbial studies through "omics" approaches. This technology has considerably augmented the knowledge of the microbial world without isolation prior to their identification. With an enormous volume of bacterial "omics" data, considera...

journal_title：Frontiers in microbiology

authors： Parmar KM,Gaikwad SL,Dhakephalkar PK,Kothari R,Singh RP

更新日期：2017-04-07 00:00:00

abstract：:The multidomain (B-NG) protein FlhF, a flagellar biogenesis regulator in several bacteria, is the third paralog of the signal recognition particle (SRP)-GTPases Ffh and FtsY, which are known to drive protein-delivery to the plasma membrane. Previously, we showed that FlhF is required for Bacillus cereus pathogenicity ...

journal_title：Frontiers in microbiology

authors： Mazzantini D,Fonnesu R,Celandroni F,Calvigioni M,Vecchione A,Mrusek D,Bange G,Ghelardi E

更新日期：2020-05-06 00:00:00

abstract：:The aim of this study was to determine the microbial community composition in the rumen of yaks under different feeding regimes. Microbial communities were assessed by sequencing bacterial and archaeal 16S ribosomal RNA gene fragments obtained from yaks (Bos grunniens) from Qinghai-Tibetan Plateau, China. Samples were...

journal_title：Frontiers in microbiology

authors： Zhou Z,Fang L,Meng Q,Li S,Chai S,Liu S,Schonewille JT

更新日期：2017-02-07 00:00:00

abstract：:Microorganisms are able to adapt to different environments and evolve rapidly, allowing them to cope with their new environments. Such adaptive response and associated protections toward other lethal stresses, is a crucial survival strategy for a wide spectrum of microorganisms, including food spoilage bacteria, patho...

journal_title：Frontiers in microbiology

authors： Desriac N,Broussolle V,Postollec F,Mathot AG,Sohier D,Coroller L,Leguerinel I

更新日期：2013-10-02 00:00:00

abstract：:Coronavirus disease 2019 (COVID-19), caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus, has emerged as a global pandemic worldwide. In this study, we used ARTIC primers-based amplicon sequencing to profile 225 SARS-CoV-2 genomes from India. Phylogenetic analysis of 202 high-quality assem...

journal_title：Frontiers in microbiology

authors： Raghav S,Ghosh A,Turuk J,Kumar S,Jha A,Madhulika S,Priyadarshini M,Biswas VK,Shyamli PS,Singh B,Singh N,Singh D,Datey A,Avula K,Smita S,Sabat J,Bhattacharya D,Kshatri JS,Vasudevan D,Suryawanshi A,Dash R,Senapati

更新日期：2020-11-23 00:00:00

abstract：:Azole-resistant (azole-R) Aspergillus is an increasing challenge worldwide. Patients with cystic fibrosis (CF) are at risk of Aspergillus colonization and disease due to a favorable lung environment for microorganisms. We performed a nationwide study in 2018 of azole-non-susceptible Aspergillus in CF patients and comp...

journal_title：Frontiers in microbiology

authors： Risum M,Hare RK,Gertsen JB,Kristensen L,Johansen HK,Helweg-Larsen J,Abou-Chakra N,Pressler T,Skov M,Jensen-Fangel S,Arendrup MC

更新日期：2020-08-13 00:00:00

abstract：:Gut microbiota regulates host metabolism and immunity. The phylogenetic composition of gut microbiota is influenced by diverse factors that include host gender. In this study, the effects of gender on gut microbial composition and its subsequent influence on serum metabolites in pigs were evaluated. The bacterial comp...

journal_title：Frontiers in microbiology

authors： He M,Gao J,Wu J,Zhou Y,Fu H,Ke S,Yang H,Chen C,Huang L

更新日期：2019-06-18 00:00:00

abstract：:We present the details of a numerical model, BIOB that is capable of simulating the biodegradation of oil entrapped in the sediment. The model uses Monod kinetics to simulate the growth of bacteria in the presence of nutrients and the subsequent consumption of hydrocarbons. The model was used to simulate experimental ...

journal_title：Frontiers in microbiology

authors： Torlapati J,Boufadel MC

更新日期：2014-05-14 00:00:00

abstract：:To investigate the diversity of butane-oxidizing bacteria in soils contaminated by long-term light hydrocarbon microseepage and the influence of butane on the soil microbial community, a quantitative study and identification of butane-oxidizing bacteria (BOB) in soils at the Puguang gas field were performed by DNA-bas...

journal_title：Frontiers in microbiology

authors： Deng Y,Deng C,Yang J,Li B,Wang E,Yuan H

更新日期：2018-07-17 00:00:00

abstract：:The deadwood mycobiome, also known as wood-inhabiting fungi (WIF), are among the key players in wood decomposition, having a large impact on nutrient cycling in forest soils. However, our knowledge of WIF richness and distribution patterns in different forest biomes is limited. Here, we used pyrotag sequencing of the ...

journal_title：Frontiers in microbiology

authors： Purahong W,Pietsch KA,Lentendu G,Schöps R,Bruelheide H,Wirth C,Buscot F,Wubet T

更新日期：2017-04-19 00:00:00

abstract：:Streptococcus suis serotype 2 (SS2) is an emerging human pathogen worldwide. A large outbreak occurred in the summer of 2005 in China. Serum samples from this outbreak revealed that levels of the main proinflammatory cytokines were significantly higher in patients with streptococcal toxic-shock-like syndrome (STSLS) t...

journal_title：Frontiers in microbiology

authors： Bi L,Pian Y,Chen S,Ren Z,Liu P,Lv Q,Zheng Y,Zhang S,Hao H,Yuan Y,Jiang Y

更新日期：2015-06-26 00:00:00

abstract：:Considering that the current immunoassays are not able to distinguish the infective forms that cause Toxoplasma gondii infection, the present study was carried out to evaluate the reactivity of two recombinant proteins (CCp5A and OWP1) from oocyst/sporozoite, in order to differentiate infections occurring by ingestion...

journal_title：Frontiers in microbiology

authors： Santana SS,Gebrim LC,Carvalho FR,Barros HS,Barros PC,Pajuaba AC,Messina V,Possenti A,Cherchi S,Reiche EM,Navarro IT,Garcia JL,Pozio E,Mineo TW,Spano F,Mineo JR

更新日期：2015-11-24 00:00:00

abstract：:A range of attributes determines the virulence of human pathogens. During interactions with their hosts, pathogenic microbes often undergo transitions between distinct stages, and the ability to switch between these can be directly related to the disease process. Understanding the mechanisms and dynamics of these tran...

journal_title：Frontiers in microbiology

authors： Tyc KM,Kühn C,Wilson D,Klipp E

更新日期：2014-02-06 00:00:00

abstract：:The first documented nosocomial outbreak caused by Serratia marcescens in Spain occurred in 1969 at the neonatal intensive care unit (NICU) of the tertiary La Paz Children's Hospital in Madrid, Spain, and based on the available phenotyping techniques at this time, it was considered as a monoclonal outbreak. Only 47 ye...

journal_title：Frontiers in microbiology

authors： Saralegui C,Ponce-Alonso M,Pérez-Viso B,Moles Alegre L,Escribano E,Lázaro-Perona F,Lanza VF,de Pipaón MS,Rodríguez JM,Baquero F,Del Campo R

更新日期：2020-03-31 00:00:00

abstract：:The problem of food spoilage due to Aspergillus flavus (A. flavus) needs to be resolved. In this study, we found that the minimum inhibitory concentration of cinnamaldehyde (CA) that inhibited A. flavus was 0.065 mg/ml and that corn can be prevented from spoiling at a concentration of 0.13 mg/cm3. In addition to inhib...

journal_title：Frontiers in microbiology

authors： Qu S,Yang K,Chen L,Liu M,Geng Q,He X,Li Y,Liu Y,Tian J

更新日期：2019-12-18 00:00:00

abstract：:Carbapenems are major antibiotics reserved to human medicine. This study aimed to investigate the mechanisms of carbapenem resistance of a selection of Pseudomonas aeruginosa veterinary strains from the French network Resapath. Thirty (5.7%) imipenem and/or meropenem non-susceptible P. aeruginosa of canine (n = 24), f...

journal_title：Frontiers in microbiology

authors： Haenni M,Bour M,Châtre P,Madec JY,Plésiat P,Jeannot K

更新日期：2017-09-29 00:00:00

abstract：:In this work we report the whole genome sequences of six new Geobacillus xylanolytic strains along with the genomic analysis of their capability to degrade carbohydrates. The six sequenced Geobacillus strains described here have a range of GC contents from 43.9% to 52.5% and clade with named Geobacillus species throug...

journal_title：Frontiers in microbiology

authors： Brumm PJ,De Maayer P,Mead DA,Cowan DA

更新日期：2015-05-12 00:00:00

abstract：:Lactic acid bacteria (LAB) are the primary genera of the intestinal flora and have many probiotic functions. In the present study, Lactobacillus rhamnosus GG (LGG) ATCC 53103 was used to treat BALB/c mice. After LGG intervention, both low and high LGG doses were shown to improve the observed OTU, Chao1, ACE, and Shann...

journal_title：Frontiers in microbiology

authors： Shi CW,Cheng MY,Yang X,Lu YY,Yin HD,Zeng Y,Wang RY,Jiang YL,Yang WT,Wang JZ,Zhao DD,Huang HB,Ye LP,Cao X,Yang GL,Wang CF

更新日期：2020-12-17 00:00:00