Abstract：
:There is little evidence for the involvement of microRNAs (miRs) in the regulation of circadian rhythms, despite the potential relevance of these elements in the posttranscriptional regulation of the clock machinery. The present work aimed to identify miRs targeting circadian genes through a predictive analysis of conserved miRs in mammals. Besides 23 miRs previously associated with circadian rhythms, we found a number of interesting candidate genes, equally predicted by the 3 software programs used, including miR-9, miR-24, miR25, miR-26, miR-27, miR-29, miR-93, miR-211, miR-302, and miR-346. Moreover, several miRs are predicted to be regulated by circadian transcription factors, such as CLOCK/BMAL, DEC2, and REV-ERBalpha. Using real-time PCR we demonstrated that the selected candidate miR-27b showed a daily variation in human leukocytes. This study presents predicted feedback loops for mammalian molecular clock and the first description of an miR with in vivo daily variation in humans.
journal_name
J Biol Rhythmsjournal_title
Journal of biological rhythmsauthors
Figueredo Dde S,Barbosa MR,Gitaí DL,de Andrade TGdoi
10.1177/0748730413476827subject
Has Abstractpub_date
2013-04-01 00:00:00pages
107-16issue
2eissn
0748-7304issn
1552-4531pii
28/2/107journal_volume
28pub_type
杂志文章abstract：:Perhaps the most observable of the many circadian oscillations that have been described in both vertebrate and invertebrate animals is the daily alterations in periods of rest and activity. Recent studies in the fruit fly Drosophila melanogaster suggest that these periods of inactivity are not simply rest but share ma...
journal_title：Journal of biological rhythms
pub_type： 杂志文章,评审
doi：10.1177/0748730402239672
更新日期：2003-02-01 00:00:00
abstract：:In isolated slices of hypothalamus, suprachiasmatic nucleus (SCN) neurons were recorded intracellularly. Blockade of Ca++ channels increased spike duration, eliminating an early component of the afterhyperpolarization (AHP) that followed evoked spikes. The duration and reversal potential of AHPs were, however, unaffec...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873049000500106
更新日期：1990-04-01 00:00:00
abstract：:Over 90% of neurons within the suprachiasmatic nucleus (SCN) express γ-aminobutyric acid (GABA). Although GABA is primarily an inhibitory neurotransmitter, in vitro studies suggest that the activation of GABAA receptors (GABAAR) elicits excitation in the adult SCN. The ratio of excitatory to inhibitory responses to GA...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730418782820
更新日期：2018-08-01 00:00:00
abstract：:Siberian hamsters are photoperiodic seasonally breeding rodents. To date, there has been no evidence that Siberian hamsters exhibit an annual rhythm in reproductive, thermoregulatory, molt, or body mass changes. However, given that the termination of their winter cycle is under endogenous control, the authors thought ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873040001500206
更新日期：2000-04-01 00:00:00
abstract：:A gradual adaptation to a shifted light-dark (LD) cycle is a key element of the circadian clock system and believed to be controlled by the central circadian pacemaker, the suprachiasmatic nucleus (SCN). Endocrine factors have a strong influence on the regulation of the circadian clock network and alter acute photic r...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730420965291
更新日期：2020-12-01 00:00:00
abstract：:A 24-h treatment with the cytokine tumor necrosis factor-alpha (TNF-alpha) suppresses transcription of E-box-driven clock genes (D-site albumin promoter binding protein, Dbp; Tyrotroph embryonic factor, Tef ; Hepatic leukemia factor, Hlf; Period homolog to Drosophila 1/2/3, Per1, Per2, and Per3) by yet unknown molecul...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730409336579
更新日期：2009-08-01 00:00:00
abstract：:DEC1 and DEC2-basic helix-loop-helix transcription factors-exhibit a circadian expression in the suprachiasmatic nucleus and other peripheral tissues and seem to play roles in regulating the mammalian circadian rhythm by suppressing the CLOCK/BMAL1-activated promoters of Per1, Dec1, and Dec2. The authors present data ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730405280195
更新日期：2005-10-01 00:00:00
abstract：:To assess binocular interactions and possible ocular dominance in entrainment of circadian rhythms, Syrian hamsters maintained in LL were subjected for several weeks to schedules of eye occlusion with opaque contact lenses. In separate groups, the opaque lens was inserted into the left or right eye for 12 h at the sam...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730404272967
更新日期：2005-02-01 00:00:00
abstract：:Although pineal "synaptic" ribbons (SR) are frequently examined by means of quantitative electron microscopy, their functional significance remains unclear. The same is true for related structures--"synaptic" spherules (SPH). In the course of such studies, it has been noted that SR counts may differ from laboratory to...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873048800300103
更新日期：1988-04-01 00:00:00
abstract：:Extracellular spike activity from three different types of visual interneurons found in the optic lobe of the giant cockroach Blaberus giganteus was recorded. The spike rate of all three types of neurons fluctuated in a circadian manner in constant darkness (DD). Two types, so-called "on" neurons (ON1 and ON2), respon...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873049300800404
更新日期：1993-01-01 00:00:00
abstract：:African sleeping sickness is characterized by alterations in rhythmic functions. It is not known if the disease affects the expression of clock genes, which are the molecular basis for rhythm generation. We used a chronic rat model of experimental sleeping sickness, caused by the extracellular parasite Trypanosoma bru...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730409360963
更新日期：2010-04-01 00:00:00
abstract：:Little is known about the differences in the neural substrates of circadian rhythms that are responsible for the maintenance of differences between diurnal and nocturnal patterns of activity in mammals. In both groups of animals, the suprachiasmatic nucleus (SCN) functions as the principal circadian pacemaker, and sur...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873099129000713
更新日期：1999-08-01 00:00:00
abstract：:The daily biological clock regulates the timing of sleep and physiological processes that are of fundamental importance to human health, performance, and well-being. Environmental parameters of relevance to biological clocks include (1) daily fluctuations in light intensity and temperature, and (2) seasonal changes in...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730408320284
更新日期：2008-08-01 00:00:00
abstract：:Morningness and eveningness preference, an endogenous component of the circadian clock, is characterized by an interindividual difference in circadian phase and requires of humans a specific timing of behavior. The biological rhythms of morning and evening types are consequently phase shifted with fixed socioeconomic ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873001129001764
更新日期：2001-04-01 00:00:00
abstract：:The temporal expression pattern of the circadian clock gene period was compared between heads of the linden bug, Pyrrhocoris apterus , kept under diapause-promoting short days (SD) and diapause-preventing long days (LD) using a real-time PCR quantification. Diapause or reproduction was programmed by photoperiod during...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730407303624
更新日期：2007-08-01 00:00:00
abstract：:In mammals, the suprachiasmatic nucleus (SCN) is the central pacemaker organizing circadian rhythms of behavior and physiology. At the cellular level, the mammalian clock consists of autoregulatory feedback loops involving a set of "clock genes," including the Cryptochrome (Cry) genes, Cry1 and Cry2. Experimental evid...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730412461246
更新日期：2012-12-01 00:00:00
abstract：:Past research has shown that there is a circadian oscillator in laboratory rats that is entrained by restricted feeding schedules. However, in laboratory rats at least, the light-dark (LD) cycle is the dominant zeitgeber in the entrainment of wheel-running activity rhythms. Given that dasyurid marsupials are predomina...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873048900400104
更新日期：1989-04-01 00:00:00
abstract：:Rhodopsin 7 ( Rh7), a new invertebrate Rhodopsin gene, was discovered in the genome of Drosophila melanogaster in 2000, but its function has remained elusive. We generated an Rh7 null mutant ( Rh70) by P element-mediated mutagenesis and found that an absence of Rh7 had significant effects on fly activity patterns duri...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730417721826
更新日期：2017-10-01 00:00:00
abstract：:The classical power spectrum, computed in the frequency domain, outranks traditionally used periodograms derived in the time domain (such as the chi2 periodogram) regarding the search for biological rhythms. Unfortunately, classical power spectral analysis is not possible with unequally spaced data (e.g., time series ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873099129000984
更新日期：1999-12-01 00:00:00
abstract：:The synchronizing stimulus, its transduction site, and the afferent pathways responsible for feeding entrainment remain unknown. In fish, the role of the diet in the development of feeding anticipatory activity (FAA) is not well understood and fundamental questions on the mechanisms of feeding entrainment, such as the...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873040101600107
更新日期：2001-02-01 00:00:00
abstract：:Ground squirrels, Spermophilus tridecemlineatus, were kept in a 12:12 h light-dark cycle. As expected for a diurnal species, their locomotor activity occurred almost entirely in the daytime. Expression of mPer1 and mPer2 in the suprachiasmatic nucleus was studied at six time points by in situ hybridization. For both t...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873001129002141
更新日期：2001-10-01 00:00:00
abstract：:Temperature compensation of circadian rhythms in neuronal firing rate was investigated in the suprachiasmatic nucleus (SCN) of ground squirrels and rats in vitro. A reduction in SCN temperature from 37 to 25 degrees C reduced peak firing rates by > 70% in rats but only by approximately 21% in squirrels; trough firing ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873049601100205
更新日期：1996-06-01 00:00:00
abstract：:The light preferences of fruit flies were tested by 2 different means. First, flies were allowed to choose between different illuminations, and their favorite resting, grooming, and feeding places were determined with an infrared-sensitive camera. Second, the activity levels of the animals during their main daily acti...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730407306198
更新日期：2007-10-01 00:00:00
abstract：:The circadian rhythm of eclosion activity and its pacemaker were analyzed in a series of latitudinal races of Drosophila auraria ranging from 34.2 degrees to 42.9 degrees N in Japan. The phase of the rhythm (psi EL) to the daily photoperiod (PP) changes as daylength is increased, and the slope of psi EL (PP) changes w...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：
更新日期：1989-07-01 00:00:00
abstract：:The circadian timing system has three principal elements: the retina, the intergeniculate leaflet (IGL) of the thalamus, and the suprachiasmatic nucleus (SCN). Since the human circadian timing system cannot be studied experimentally, we have used another primate, the macaque monkey, to help provide insight into the or...
journal_title：Journal of biological rhythms
pub_type： 杂志文章,评审
doi：
更新日期：1993-01-01 00:00:00
abstract：:The mammalian circadian clock in the suprachiasmatic nucleus (SCN) drives and maintains 24-h physiological rhythms, the phases of which are set by the local environmental light-dark cycle. Gastrin-releasing peptide (GRP) communicates photic phase setting signals in the SCN by increasing neurophysiological activity of ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/0748730410396678
更新日期：2011-04-01 00:00:00
abstract：:Numerous studies have demonstrated sleep-promoting effects of melatonin treatment in humans, as evidenced by subjects' self-reports, polysomnographic recordings, and continuous actigraphic registration of motor activity. The sleep-promoting effects of either physiological or pharmacological doses of melatonin typicall...
journal_title：Journal of biological rhythms
pub_type： 杂志文章,评审
doi：10.1177/074873049701200620
更新日期：1997-12-01 00:00:00
abstract：:Siberian hamsters transferred from a long (16 h light/day [16 L]) to an intermediate (13.5 L) day length (DL) undergo testicular regression within 2 months followed approximately 2 months later by "spontaneous" testicular recrudescence. Recovery of gonadal function after prolonged exposure to intermediate DLs is thoug...
journal_title：Journal of biological rhythms
pub_type： 杂志文章
doi：10.1177/074873002129002645
更新日期：2002-08-01 00:00:00
abstract：:Two major approaches have been used to model circadian clocks. Qualitative modeling, used prior to the recent wealth of detailed molecular knowledge, makes general predictions but cannot provide detailed mechanistic insights. The more recent biophysical approach, on the other hand, incorporates the biochemical events ...
journal_title：Journal of biological rhythms
pub_type： 杂志文章,评审
doi：10.1177/0748730407301823
更新日期：2007-06-01 00:00:00
abstract：:The endogenous circadian rhythm of melatonin in humans provides information regarding the resetting response of the human circadian timing system to changes in the light-dark (LD) cycle. Alterations in the LD cycle have both acute and chronic effects on the observed melatonin rhythm. Investigations to date have firmly...
journal_title：Journal of biological rhythms
pub_type： 杂志文章,评审
doi：10.1177/074873049701200610
更新日期：1997-12-01 00:00:00
