Effect of precise control of flux ratio between the glycolytic pathways on mevalonate production in Escherichia coli.

Abstract:

:Mevalonate is a useful metabolite synthesized from three molecules of acetyl-CoA, consuming two molecules of NADPH. Escherichia coli ( E. coli) catabolizes glucose to acetyl-CoA via several routes, such as the Embden-Meyerhof-Parnas (EMP) and the oxidative pentose phosphate (oxPP) pathways. Although the oxPP pathway supplies NADPH, it is disadvantageous in terms of acetyl-CoA supply, compared with the EMP pathway. In this study, the optimal flux ratio between the EMP and oxPP pathways on the mevalonate yield was investigated. Expression level of pgi was controlled by isopropyl β-D-1-thiogalactopyranoside (IPTG) inducible promoter in an engineered mevalonate-producing E. coli strain. The relationship between the flux ratio and mevalonate yield was evaluated by changing the flux ratio by varying IPTG concentration. At the stationary phase, the mevalonate yield was maximum at an EMP flux of 39.7%, and was increased by 25% compared with that with no flux control (EMP flux of 70.4%). The optimal flux ratio was consistent with the theoretical value based on the mass balance of NADPH. The flux ratio between EMP and oxPP pathways affects the synthesis fluxes of mevalonate and acetate from acetyl-CoA. Fine tuning of the flux ratio would be necessary to achieve an optimized production of metabolites that require NADPH.

journal_name

Biotechnol Bioeng

authors

Kamata K,Toya Y,Shimizu H

doi

10.1002/bit.26923

subject

Has Abstract

pub_date

2019-05-01 00:00:00

pages

1080-1088

issue

5

eissn

0006-3592

issn

1097-0290

journal_volume

116

pub_type

杂志文章
  • Simple diffusion is the primary mechanism for glucose uptake during the production phase of the Aspergillus niger citric acid process.

    abstract::Models for the known glucose transporters in Aspergillus niger and for simple diffusion of glucose through the hyphal membrane were prepared. The results from the models were compared with fermentation data from published studies on citric acid. It was found that the purely physical and uncontrolled process of diffusi...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(20000220)67:4<451::aid-bit

    authors: Wayman FM,Mattey M

    更新日期:2000-02-20 00:00:00

  • Kinetics of ethanol inhibition in alcohol fermentation.

    abstract::The inhibitory effect of ethanol on yeast growth and fermentation has been studied for the strain Saccharomyces cerevisiae ATCC No. 4126 under anaerobic batch conditions. The results obtained reveal that there is no striking difference between the response of growth and ethanol fermentation. Two kinetic models are als...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260270311

    authors: Luong JH

    更新日期:1985-03-01 00:00:00

  • Dynamic simulator for anaerobic digestion processes.

    abstract::A transient, two-culture model simulating methane production from biomass has been developed. The simulator, based partially on the work by Andrews and McCarty, is capable of calculating the hydrolysis products of several common organic materials, accommodating various substrate feeding modes, and simulating the trans...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260240903

    authors: Kleinstreuer C,Poweigha T

    更新日期:1982-09-01 00:00:00

  • Water activity control: a way to improve the efficiency of continuous lipase esterification.

    abstract::During continuous lipase-catalyzed oleic acid esterification by ethanol in n-hexane, the oleic acid conversion, initially at 95%, decreases to 20% after 2 h. This decrease is caused by the accumulation of the water produced in the course of the reaction in the packed-bed reactor (PBR). In order to improve the PBR effi...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:

    authors: Colombié S,Tweddell RJ,Condoret JS,Marty A

    更新日期:1998-11-05 00:00:00

  • NADH and flavin fluorescence responses of starved yeast cultures to substrate additions.

    abstract::Model experiments were performed with starved yeast (Saccharomyces cerevisiae) cultures in a batch reactor in order to develop a better understanding of NAD(P)H and flavin culture fluorescence. Fluorescence was monitored during aerobic-anaerobic-aerobic transitions and ethanol and glucose substrate addition experiment...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260340510

    authors: Siano SA,Mutharasan R

    更新日期:1989-08-20 00:00:00

  • Biocatalysis of isomerization of 1,2-benzisoxazole by bovine serum albumin in an organic solvent.

    abstract::The catalytic properties of bovine serum albumin (BSA) have been studied rather extensively. The protein has shown catalytic activities toward a variety of reactions in aqueous media. However, there appears to be no reports of reactions catalyzed exclusively in organic media. In this study, we report the catalytic pro...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.1144

    authors: Liu XC,Lemma-Gray P

    更新日期:2001-09-20 00:00:00

  • A flow injection flow cytometry system for on-line monitoring of bioreactors.

    abstract::For direct and on-line study of the physiological states of cell cultures, a robust flow injection system has been designed and interfaced with flow cytometry (FI-FCM). The core of the flow injection system includes a microchamber designed for sample processing. The design of this microchamber allows not only an accur...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19990305)62:5<609::aid-bit

    authors: Zhao R,Natarajan A,Srienc F

    更新日期:1999-03-05 00:00:00

  • A simple macroscopic model for the diffusion and adsorption kinetics of r-adenovirus.

    abstract::The diffusion of viruses toward cells is a limiting step of the infection process. To be modeled correctly, this step must be evaluated in combination with the adsorption of the virus to the cell surface, which is a rapid but reversible step. In this paper, the recombinant adenovirus (rAd) diffusion and its adsorption...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21340

    authors: Gilbert PA,Kamen A,Bernier A,Garnier A

    更新日期:2007-09-01 00:00:00

  • Gas phase transesterification reactions catalyzed by lipolytic enzymes.

    abstract::Porcine pancreatic lipase and Fusarium solani cutinase were used to catalyze transesterification reactions between methyl propionate, ethyl propionate, and a series of primary alcohols at high temperatures in a continuous packed-bed gas-solid reactor, in which the solid phase is composed of the enzyme and the substrat...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260390415

    authors: Parvaresh F,Robert H,Thomas D,Legoy MD

    更新日期:1992-02-20 00:00:00

  • Establishing the scalable manufacture of primary human T-cells in an automated stirred-tank bioreactor.

    abstract::Advanced cell and gene therapies such as chimeric antigen receptor T-cell immunotherapies (CAR-T), present a novel therapeutic modality for the treatment of acute and chronic conditions including acute lymphoblastic leukemia and non-Hodgkin lymphoma. However, the development of such immunotherapies requires the manufa...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27088

    authors: Costariol E,Rotondi M,Amini A,Hewitt CJ,Nienow AW,Heathman TRJ,Micheletti M,Rafiq QA

    更新日期:2019-10-01 00:00:00

  • Light-responsive bioconjugates as novel tools for specific capture of biologicals by photoaffinity precipitation.

    abstract::Light-responsive bioconjugates are synthesized by a two-step protocol calling first for cotelomerization (chain-transfer polymerization) of N-isopropylacrylamide and N-acryloxysuccinimide. The desired bioligand (biotin) is used in modified form as chain-transfer agent in this step. As a consequence, 100% of the produc...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20479

    authors: Desponds A,Freitag R

    更新日期:2005-09-05 00:00:00

  • Engineering of baker's yeasts, E. coli and Bacillus hosts for the production of Bacillus subtilis Lipase A.

    abstract::Lipases are versatile biocatalists showing multiple applications in a wide range of biotechnological processes. The gene lipA coding for Lipase A from Bacillus subtilis was isolated by PCR amplification, cloned and expressed in Escherichia coli, Saccharomyces cerevisiae and Bacillus subtilis strains, using pBR322, YEp...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10201

    authors: Sánchez M,Prim N,Rández-Gil F,Pastor FI,Diaz P

    更新日期:2002-05-05 00:00:00

  • Application of hypoosmolar medium to fed-batch culture of hybridoma cells for improvement of culture longevity.

    abstract::Cell culture longevity in fed-batch culture of hybridomas is often limited by elevated medium osmolality caused by repeated nutrient feeding. Shotwise feeding of 10x Dulbecco's modified Eagle's medium (DMEM) concentrates elevated the osmolality of medium up to 540 mOsm/kg at the end of fed-batch culture of S3H5/gamma2...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19990105)62:1<120::aid-bit

    authors: Ryu JS,Lee GM

    更新日期:1999-01-05 00:00:00

  • Biomass yields and energetic yields of oleaginous yeasts in batch culture.

    abstract::This article provides the analysis on biomass yields and energetic yields of the oleaginous yeasts. The biomass yields of the oleaginous yeasts are consistently lower than nonoleaginous microorganisms, whereas their energetic yields are higher. Data inconsistencies of literature are explained by the variation of energ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260280117

    authors: Pan JG,Rhee JS

    更新日期:1986-01-01 00:00:00

  • Insulin receptor antibody-iduronate 2-sulfatase fusion protein: pharmacokinetics, anti-drug antibody, and safety pharmacology in Rhesus monkeys.

    abstract::Mucopolysaccharidosis (MPS) Type II is caused by mutations in the gene encoding the lysosomal enzyme, iduronate 2-sulfatase (IDS). The majority of MPSII cases affect the brain. However, enzyme replacement therapy with recombinant IDS does not treat the brain, because IDS is a large molecule drug that does not cross th...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.25289

    authors: Boado RJ,Ka-Wai Hui E,Zhiqiang Lu J,Pardridge WM

    更新日期:2014-11-01 00:00:00

  • Use of a tapered fluidized bed as a continuous bioreactor.

    abstract::Reactor systems based on tapered fluidized beds are being developed for aqueous bioprocesses in which adhering microorganisms or immobilized active biological fractions are used. The use of a fluidized bed prevents biomass buildup, accommodates particulates in the feed stream, is compatible with gas sparging, and allo...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260181006

    authors: Scott CD,Hancher CW

    更新日期:1976-10-01 00:00:00

  • Stratified microbial structure and activity within anode biofilm during electrochemically assisted brewery wastewater treatment.

    abstract::In a bioelectrochemical system (BES), microbial community of anode biofilm is crucial to BES performance. In this study, the stratified pattern of community structure and activity of an anode-respiring biofilm in a BES fueled with brewery wastewater was investigated over time. The anode biofilm exhibited a superior pe...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27342

    authors: Mai Q,Yang G,Cao J,Zhang X,Zhuang L

    更新日期:2020-07-01 00:00:00

  • Characterization of a hydrogen-producing granular sludge.

    abstract::This study demonstrated that hydrogen-producing acidogenic sludge could agglutinate into granules in a well-mixed reactor treating a synthetic sucrose-containing wastewater at 26 degrees C, pH 5.5, with 6 h of hydraulic retention. A typical matured granule is 1.6 mm in diameter, 1.038 g/mL in density, 11% in ash conte...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10174

    authors: Fang HH,Liu H,Zhang T

    更新日期:2002-04-05 00:00:00

  • Process parameter shifting: Part I. Effect of DOT, pH, and temperature on the performance of Epo-Fc expressing CHO cells cultivated in controlled batch bioreactors.

    abstract::The impact of process environment changes on process performance is one of the most crucial process safety issues when cultivating mammalian cells in a bioreactor. In contrast, directed shifting of process parameters can also be used as an optimization tool providing higher cell and product yields. Compared to other s...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21013

    authors: Trummer E,Fauland K,Seidinger S,Schriebl K,Lattenmayer C,Kunert R,Vorauer-Uhl K,Weik R,Borth N,Katinger H,Müller D

    更新日期:2006-08-20 00:00:00

  • Characterization of Cas proteins for CRISPR-Cas editing in streptomycetes.

    abstract::Application of the well-characterized Streptococcus pyogenes CRISPR-Cas9 system in actinomycetes streptomycetes has enabled high-efficiency multiplex genome editing and CRISPRi-mediated transcriptional regulation in these prolific bioactive metabolite producers. Nonetheless, SpCas9 has its limitations and can be ineff...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27021

    authors: Yeo WL,Heng E,Tan LL,Lim YW,Lim YH,Hoon S,Zhao H,Zhang MM,Wong FT

    更新日期:2019-09-01 00:00:00

  • Accelerated homology-directed targeted integration of transgenes in Chinese hamster ovary cells via CRISPR/Cas9 and fluorescent enrichment.

    abstract::Targeted gene integration into site-specific loci can be achieved in Chinese hamster ovary (CHO) cells via CRISPR/Cas9 genome editing technology and the homology-directed repair (HDR) pathway. The low efficiency of HDR often requires antibiotic selection, which limits targeted integration of multiple genes at multiple...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.26002

    authors: Lee JS,Grav LM,Pedersen LE,Lee GM,Kildegaard HF

    更新日期:2016-11-01 00:00:00

  • In vitro degradation of natural insoluble lignin in aqueous media by the extracellular peroxidases of Phanerochaete chrysosporium.

    abstract::The lignin peroxidases (LIP) and manganese peroxidases (MNP) of Phanerochaete chrysosporium catalyze a wide range of lignin depolymerization reactions with lignin models and synthetic lignins in solution. However, their ability to degrade insoluble natural lignin in aqueous media has not been demonstrated. Insoluble i...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19980320)57:6<704::aid-bit

    authors: Thompson DN,Hames BR,Reddy CA,Grethlein HE

    更新日期:1998-03-20 00:00:00

  • Kinetic, dynamic, and pathway studies of glycerol metabolism by Klebsiella pneumoniae in anaerobic continuous culture: III. Enzymes and fluxes of glycerol dissimilation and 1,3-propanediol formation.

    abstract::The initial steps of glycerol dissimilation and 1,3-propanediol (1, 3-PD) formation by Klebsiella pneumoniae anaerobically grown on glycerol were studied by quantifying the in vitro and in vivo activities of enzymes in continuous culture under conditions of steady state and oscillation and during transient phases. The...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0290(19980905)59:5<544::aid-bit

    authors: Ahrens K,Menzel K,Zeng A,Deckwer W

    更新日期:1998-09-05 00:00:00

  • Towards the industrialization of new biosurfactants: Biotechnological opportunities for the lactone esterase gene from Starmerella bombicola.

    abstract::Although sophorolipids (SLs) produced by S. bombicola are a real showcase for the industrialization of microbial biosurfactants, some important drawbacks are associated with this efficient biological process, e.g., the simultaneous production of acidic and lactonic SLs. Depending on the application, there is a require...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.25815

    authors: Roelants SL,Ciesielska K,De Maeseneire SL,Moens H,Everaert B,Verweire S,Denon Q,Vanlerberghe B,Van Bogaert IN,Van der Meeren P,Devreese B,Soetaert W

    更新日期:2016-03-01 00:00:00

  • The acetone butanol fermentation on glucose and xylose. I. Regulation and kinetics in batch cultures.

    abstract::The kinetics in batch culture of the acetone butanol fermentation by Clostridium acetobutylicum is compared on glucose, xylose, and mixtures of both sugars. The fastest initial growth and transition from an acid to a solvent metabolism occurs on glucose, with a final 62 g/L glucose conversion. On xylose, an initial sl...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260280203

    authors: Fond O,Engasser JM,Matta-El-Amouri G,Petitdemange H

    更新日期:1986-02-01 00:00:00

  • Chemical treatment of Escherichia coli: 1. Extraction of intracellular protein from uninduced cells.

    abstract::Extraction of intracellular protein from Escherichia coli is traditionally achieved by mechanical disruption. A chemical treatment that destroys the integrity of the bacterial cell wall and could provide an alternative technique is examined in this study. Treatment with a combination of the chelating agent ethylenedia...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/(SICI)1097-0290(19970305)53:5<453::AID-BIT

    authors: Falconer RJ,O'Neill BK,Middelberg AP

    更新日期:1997-03-05 00:00:00

  • Wide-surface pore microfiltration membrane drastically improves sieving decay in TFF-based perfusion cell culture and streamline chromatography integration for continuous bioprocessing.

    abstract::Although several compelling benefits for bioprocess intensification have been reported, the need for a streamlined integration of perfusion cultures with capture chromatography still remains unmet. Here, a robust solution is established by conducting tangential flow filtration-based perfusion with a wide-surface pore ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27504

    authors: Pinto NDS,Brower M

    更新日期:2020-07-15 00:00:00

  • The kinetics of cometabolism.

    abstract::Experimental observations indicate that the rates of cometabolic transformation are linked to the consumption of growth substrate during growth and to the consumption of cell mass and/or energy substrate in the absence of growth substrate. Three previously proposed models (models 1 through 3) describing the kinetics o...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260411107

    authors: Criddle CS

    更新日期:1993-05-01 00:00:00

  • Uptake of cadmium and zinc by the alga Chlorella vulgaris: part 1. Individual ion species.

    abstract::The ability of algae and bacteria to accumulate heavy metals from the surrounding environment is a widely recognized phenomenon that has a number of important implications. This work reports on the development of a quantitative model that addresses the basic mechanisms inherent in many uptake processes. The model post...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260340713

    authors: Ting YP,Lawson F,Prince IG

    更新日期:1989-10-05 00:00:00

  • Protein-protein interactions in concentrated electrolyte solutions.

    abstract::Protein-protein interactions were measured for ovalbumin and for lysozyme in aqueous salt solutions. Protein-protein interactions are correlated with a proposed potential of mean force equal to the free energy to desolvate the protein surface that is made inaccessible to the solvent due to the protein-protein interact...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10342

    authors: Curtis RA,Ulrich J,Montaser A,Prausnitz JM,Blanch HW

    更新日期:2002-08-20 00:00:00