Abstract:
BACKGROUND:Leishmania tropica is a genetically divergent species. Amplification of entire internal transcribed spacer (ITS) region of L. tropica isolates obtained from Bam district, one of the well known focus of anthroponotic cutaneous leishmaniasis (ACL) in Iran, revealed a double-band pattern in agarose gel electrophoresis. This study explains how this pattern occurs. METHODS:Twenty seven L. tropica smear preparations were collected from Bam district, south east Iran, and eight L. major and one L. infantum smear preparations were gathered from Shiraz, south west Iran. Furthermore one L. major and one L. infantum cultured standard strains were tested using entire ITS-PCR to survey their electrophoretic pattern. The ITS sequences of L. tropica, L. major, and L. infantum already deposited in GenBank were analyzed. Analysis of GenBank sequences of L. tropica revealed two groups of sequences based on length size, one group having a 100 bp gap. Therefore, a new reverse primer namely LITS-MG was designed to exclude this gap in PCR products. RESULTS:Whole ITS fragment amplification resulted in a double-band pattern in all L. tropica cases, while a sharp single band was observed for L. infantum and L. major isolates. This result was corresponding to the result obtained from in silico analysis of GenBank sequences. Use of LITS-MG primer was expectedly resulted in a single band including ITS1, 5.8s and partial ITS2 product for L. tropica which is appropriate for following molecular studies such as sequencing or restriction analysis. CONCLUSION:Sequences analysis of GenBank L. tropica sequences and following practical laboratory tests revealed at least two alleles in L. tropica which were confirmed in Bam isolates. This especial double-band pattern is because of a 100 bp fragment difference within ITS-rDNA alleles.
journal_name
Iran J Parasitoljournal_title
Iranian journal of parasitologyauthors
Ghatee M,Sharifi I,Mirhendi H,Kanannejad Z,Hatam Gsubject
Has Abstractpub_date
2013-04-01 00:00:00pages
264-72issue
2eissn
1735-7020issn
2008-238Xjournal_volume
8pub_type
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journal_title:Iranian journal of parasitology
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journal_title:Iranian journal of parasitology
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更新日期:2010-09-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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journal_title:Iranian journal of parasitology
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更新日期:2012-01-01 00:00:00
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journal_title:Iranian journal of parasitology
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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journal_title:Iranian journal of parasitology
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
doi:
更新日期:2017-01-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
doi:
更新日期:2010-12-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type:
doi:
更新日期:2019-07-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
doi:
更新日期:2013-10-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
doi:
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pub_type: 杂志文章
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更新日期:2014-04-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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更新日期:2015-01-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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更新日期:2018-10-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type:
doi:
更新日期:2011-03-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章,评审
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journal_title:Iranian journal of parasitology
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更新日期:2017-07-01 00:00:00
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journal_title:Iranian journal of parasitology
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更新日期:2012-01-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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更新日期:2010-03-01 00:00:00
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journal_title:Iranian journal of parasitology
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pub_type: 杂志文章
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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更新日期:2019-07-01 00:00:00
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journal_title:Iranian journal of parasitology
pub_type: 杂志文章
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