Abstract:
:Phaeobacter arcticus Zhang et al. 2008 belongs to the marine Roseobacter clade whose members are phylogenetically and physiologically diverse. In contrast to the type species of this genus, Phaeobacter gallaeciensis, which is well characterized, relatively little is known about the characteristics of P. arcticus. Here, we describe the features of this organism including the annotated high-quality draft genome sequence and highlight some particular traits. The 5,049,232 bp long genome with its 4,828 protein-coding and 81 RNA genes consists of one chromosome and five extrachromosomal elements. Prophage sequences identified via PHAST constitute nearly 5% of the bacterial chromosome and included a potential Mu-like phage as well as a gene-transfer agent (GTA). In addition, the genome of strain DSM 23566(T) encodes all of the genes necessary for assimilatory nitrate reduction. Phylogenetic analysis and intergenomic distances indicate that the classification of the species might need to be reconsidered.
journal_name
Stand Genomic Scijournal_title
Standards in genomic sciencesauthors
Freese HM,Dalingault H,Petersen J,Pradella S,Davenport K,Teshima H,Chen A,Pati A,Ivanova N,Goodwin LA,Chain P,Detter JC,Rohde M,Gronow S,Kyrpides NC,Woyke T,Brinkhoff T,Göker M,Overmann J,Klenk HPdoi
10.4056/sigs.383362subject
Has Abstractpub_date
2013-07-30 00:00:00pages
450-64issue
3issn
1944-3277pii
sigs.383362journal_volume
8pub_type
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journal_title:Standards in genomic sciences
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journal_title:Standards in genomic sciences
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更新日期:2016-08-23 00:00:00
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journal_title:Standards in genomic sciences
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journal_title:Standards in genomic sciences
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journal_title:Standards in genomic sciences
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journal_title:Standards in genomic sciences
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pub_type: 杂志文章
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journal_title:Standards in genomic sciences
pub_type:
doi:10.1186/s40793-017-0263-1
更新日期:2017-08-31 00:00:00
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journal_title:Standards in genomic sciences
pub_type:
doi:10.1186/s40793-016-0217-z
更新日期:2017-01-05 00:00:00
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journal_title:Standards in genomic sciences
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journal_title:Standards in genomic sciences
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journal_title:Standards in genomic sciences
pub_type: 杂志文章
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更新日期:2011-10-15 00:00:00
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journal_title:Standards in genomic sciences
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更新日期:2017-01-07 00:00:00
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pub_type: 杂志文章
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