Pyrosequencing reveals fungal communities in the rhizosphere of Xinjiang Jujube.

Abstract:

:Fungi are important soil components as both decomposers and plant symbionts and play a major role in ecological and biogeochemical processes. However, little is known about the richness and structure of fungal communities. DNA sequencing technologies allow for the direct estimation of microbial community diversity, avoiding culture-based biases. We therefore used 454 pyrosequencing to investigate the fungal communities in the rhizosphere of Xinjiang jujube. We obtained no less than 40,488 internal transcribed spacer (ITS) rDNA reads, the number of each sample was 6943, 6647, 6584, 6550, 6860, and 6904, and we used bioinformatics and multivariate statistics to analyze the results. The index of diversity showed greater richness in the rhizosphere fungal community of a 3-year-old jujube than in that of an 8-year-old jujube. Most operational taxonomic units belonged to Ascomycota, and taxonomic analyses identified Hypocreales as the dominant fungal order. Our results demonstrated that the fungal orders are present in different proportions in different sampling areas. Redundancy analysis (RDA) revealed a significant correlation between soil properties and the abundance of fungal phyla. Our results indicated lower fungal diversity in the rhizosphere of Xinjiang jujube than that reported in other studies, and we hope our findings provide a reference for future research.

journal_name

Biomed Res Int

authors

Liu P,Wang XH,Li JG,Qin W,Xiao CZ,Zhao X,Jiang HX,Sui JK,Sa RB,Wang WY,Liu XL

doi

10.1155/2015/972481

subject

Has Abstract

pub_date

2015-01-01 00:00:00

pages

972481

eissn

2314-6133

issn

2314-6141

journal_volume

2015

pub_type

杂志文章
  • Do Different LED Colours Influence Sand Fly Collection by Light Trap in the Mediterranean?

    abstract::Light traps represent the most used attractive system to collect and monitor phlebotomine sand flies. Recent studies have suggested that light traps can be easily upgraded by the use of light-emitting diode (LED) with positive effects on trap design, weight, and battery life. However, scant data on the effect of diffe...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2018/6432637

    authors: Gaglio G,Napoli E,Arfuso F,Abbate JM,Giannetto S,Brianti E

    更新日期:2018-06-27 00:00:00

  • Balance dysfunction in Parkinson's disease.

    abstract::Stability and mobility in functional motor activities depend on a precise regulation of phasic and tonic muscular activity that is carried out automatically, without conscious awareness. The sensorimotor control of posture involves a complex integration of multisensory inputs that results in a final motor adjustment p...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2015/434683

    authors: Rinalduzzi S,Trompetto C,Marinelli L,Alibardi A,Missori P,Fattapposta F,Pierelli F,Currà A

    更新日期:2015-01-01 00:00:00

  • Selective changes of resting-state brain oscillations in aMCI: an fMRI study using ALFF.

    abstract::Mild cognitive impairment (MCI) refers to a transitional state between normal aging and dementia and is a syndrome with cognitive decline greater than expected for an individual's age and educational level. As a subtype of MCI, amnestic mild cognitive impairment (aMCI) most often leads to Alzheimer's disease. This stu...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2014/920902

    authors: Zhao Z,Lu J,Jia X,Chao W,Han Y,Jia J,Li K

    更新日期:2014-01-01 00:00:00

  • New developments in peritoneal fibroblast biology: implications for inflammation and fibrosis in peritoneal dialysis.

    abstract::Uraemia and long-term peritoneal dialysis (PD) can lead to fibrotic thickening of the peritoneal membrane, which may limit its dialytic function. Peritoneal fibrosis is associated with the appearance of myofibroblasts and expansion of extracellular matrix. The extent of contribution of resident peritoneal fibroblasts ...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2015/134708

    authors: Witowski J,Kawka E,Rudolf A,Jörres A

    更新日期:2015-01-01 00:00:00

  • Efficacy of rhBMP-2 Loaded PCL/β-TCP/bdECM Scaffold Fabricated by 3D Printing Technology on Bone Regeneration.

    abstract::This study was undertaken to evaluate the effect of 3D printed polycaprolactone (PCL)/β-tricalcium phosphate (β-TCP) scaffold containing bone demineralized and decellularized extracellular matrix (bdECM) and human recombinant bone morphogenetic protein-2 (rhBMP-2) on bone regeneration. Scaffolds were divided into PCL/...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2018/2876135

    authors: Bae EB,Park KH,Shim JH,Chung HY,Choi JW,Lee JJ,Kim CH,Jeon HJ,Kang SS,Huh JB

    更新日期:2018-02-27 00:00:00

  • A therapeutic strategy for spinal cord defect: human dental follicle cells combined with aligned PCL/PLGA electrospun material.

    abstract::Stem cell implantation has been utilized for the repair of spinal cord injury; however, it shows unsatisfactory performance in repairing large scale lesion of an organ. We hypothesized that dental follicle cells (DFCs), which possess multipotential capability, could reconstruct spinal cord defect (SCD) in combination ...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2015/197183

    authors: Li X,Yang C,Li L,Xiong J,Xie L,Yang B,Yu M,Feng L,Jiang Z,Guo W,Tian W

    更新日期:2015-01-01 00:00:00

  • Metabolic Tumor Volume by 18F-FDG PET/CT Can Predict the Clinical Outcome of Primary Malignant Spine/Spinal Tumors.

    abstract:BACKGROUND AND PURPOSE:Primary malignant spine/spinal tumors (PMSTs) are rare and life-threatening diseases. In this study, we demonstrated the advantage of volume-based 18F-FDG PET/CT metabolic parameter, metabolic tumor volume (MTV), for assessing the aggressiveness of PMSTs. MATERIALS AND METHODS:We retrospectively...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2017/8132676

    authors: Matsumoto Y,Baba S,Endo M,Setsu N,Iida K,Fukushi JI,Kawaguchi K,Okada S,Bekki H,Isoda T,Kitamura Y,Honda H,Nakashima Y

    更新日期:2017-01-01 00:00:00

  • The Development and Lifetime Stability Improvement of Guanosine-Based Supramolecular Hydrogels through Optimized Structure.

    abstract::Guanosine is an important building block for supramolecular gels owing to the unique self-assembly property that results from the unique hydrogen bond acceptors and donor groups. Guanosine-derived supramolecular hydrogels have promise in the fields of drug delivery, targeted release, tissue engineering applications, e...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2019/6258248

    authors: Chen M,Lin W,Hong L,Ji N,Zhao H

    更新日期:2019-06-13 00:00:00

  • A novel animal model of impaired glucose tolerance induced by the interaction of vitamin E deficiency and (60)Co radiation.

    abstract::Impaired glucose tolerance (IGT), known as the prediabetes stage, is usually induced by habits of life or environmental factors. Established IGT animal models are mostly conducted with chemical compounds such as streptozocin or genetic modification. However, the occasion of exposure to these factors in daily life is s...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2015/457246

    authors: Guan Y,Cheng Y,Yin Y,Duan J,Wei G,Weng Y,Guo C,Zhu Y,Wang Y,Xi M,Wen A

    更新日期:2015-01-01 00:00:00

  • Yes-Associated Protein 1 as a Novel Prognostic Biomarker for Gastrointestinal Cancer: A Meta-Analysis.

    abstract:Background:Yes-associated protein 1 (YAP1) is an effector of Hippo pathway, which plays a significant role in cell proliferation and tumor progression. The relationship between YAP1 and gastrointestinal cancer has been explored in many previous studies. We conducted a meta-analysis to explore the prognostic effect of Y...

    journal_title:BioMed research international

    pub_type: 杂志文章,meta分析

    doi:10.1155/2018/4039173

    authors: Zhang L,Song X,Li X,Wu C,Jiang J

    更新日期:2018-11-14 00:00:00

  • Seasonal Variation in Essential Oils Composition and the Biological and Pharmaceutical Protective Effects of Mentha longifolia Leaves Grown in Tunisia.

    abstract::This research assessed the seasonal variation of the chemical composition and antibacterial and anticholinesterase activities of essential oils extracted from M. longifolia leaves. The leaves organic fractions were also investigated for their biological activities and pharmacological functions. The essential oil highe...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2018/7856517

    authors: Zouari-Bouassida K,Trigui M,Makni S,Jlaiel L,Tounsi S

    更新日期:2018-12-09 00:00:00

  • The Effect of Omega-3 Docosahexaenoic Acid Supplementation on Gestational Length: Randomized Trial of Supplementation Compared to Nutrition Education for Increasing n-3 Intake from Foods.

    abstract:OBJECTIVE:DHA supplementation was compared to nutrition education to increase DHA consumption from fish and DHA fortified foods. DESIGN:This two-part intervention included a randomized double-blind placebo controlled DHA supplementation arm and a nutrition education arm designed to increase intake of DHA from dietary ...

    journal_title:BioMed research international

    pub_type: 杂志文章,随机对照试验

    doi:10.1155/2015/123078

    authors: Harris MA,Reece MS,McGregor JA,Wilson JW,Burke SM,Wheeler M,Anderson JE,Auld GW,French JI,Allen KG

    更新日期:2015-01-01 00:00:00

  • VO2 kinetics and metabolic contributions whilst swimming at 95, 100, and 105% of the velocity at VO2max.

    abstract::A bioenergetical analysis of swimming at intensities near competitive distances is inexistent. It was aimed to compare the transient VO2 kinetics responses and metabolic contributions whilst swimming at different velocities around VO2max. 12 trained male swimmers performed (i) an incremental protocol to determine the ...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2014/675363

    authors: Sousa AC,Vilas-Boas JP,Fernandes RJ

    更新日期:2014-01-01 00:00:00

  • Call to Action for Nurses/Nursing.

    abstract::The 13 million nurses worldwide constitute most of the global healthcare workforce and are uniquely positioned to engage with others to address disparities in healthcare to achieve the goal of better health for all. A new vision for nurses involves active participation and collaboration with international colleagues a...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2016/3127543

    authors: Premji SS,Hatfield J

    更新日期:2016-01-01 00:00:00

  • The immune interplay between the host and the pathogen in Aspergillus fumigatus lung infection.

    abstract::The interplay between Aspergillus fumigatus and the host immune response in lung infection has been subject of studies over the last years due to its importance in immunocompromised patients. The multifactorial virulence factors of A. fumigatus are related to the fungus biological characteristics, for example, structu...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2013/693023

    authors: Sales-Campos H,Tonani L,Cardoso CR,Kress MR

    更新日期:2013-01-01 00:00:00

  • Lithium enhances axonal regeneration in peripheral nerve by inhibiting glycogen synthase kinase 3β activation.

    abstract::Brachial plexus injury often involves traumatic root avulsion resulting in permanent paralysis of the innervated muscles. The lack of sufficient regeneration from spinal motoneurons to the peripheral nerve (PN) is considered to be one of the major causes of the unsatisfactory outcome of various surgical interventions ...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2014/658753

    authors: Su H,Yuan Q,Qin D,Yang X,Wong WM,So KF,Wu W

    更新日期:2014-01-01 00:00:00

  • D-Tagatose Is a Promising Sweetener to Control Glycaemia: A New Functional Food.

    abstract::The objective of the current research was to review and update evidence on the dietary effect of the consumption of tagatose in type 2 diabetes, as well as to elucidate the current approach that exists on its production and biotechnological utility in functional food for diabetics. Articles published before July 1, 20...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2018/8718053

    authors: Guerrero-Wyss M,Durán Agüero S,Angarita Dávila L

    更新日期:2018-01-09 00:00:00

  • Assessment of Mycobacterium bovis deleted in p27-p55 virulence operon as candidate vaccine against tuberculosis in animal models.

    abstract::A Mycobacterium bovis knockout in p27-p55 operon was tested as an antituberculosis experimental vaccine in animal models. The mutant MbΔp27-p55 was significantly more attenuated in nude mice than its parental strain but more virulent than BCG Pasteur. Challenge experiments in mice and guinea pigs using M. bovis or M. ...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2014/951978

    authors: Bianco MV,Clark S,Blanco FC,Garbaccio S,García E,Cataldi AA,Williams A,Bigi F

    更新日期:2014-01-01 00:00:00

  • Regulatory systems in bone marrow for hematopoietic stem/progenitor cells mobilization and homing.

    abstract::Regulation of hematopoietic stem cell release, migration, and homing from the bone marrow (BM) and of the mobilization pathway involves a complex interaction among adhesion molecules, cytokines, proteolytic enzymes, stromal cells, and hematopoietic cells. The identification of new mechanisms that regulate the traffick...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2013/312656

    authors: Alvarez P,Carrillo E,Vélez C,Hita-Contreras F,Martínez-Amat A,Rodríguez-Serrano F,Boulaiz H,Ortiz R,Melguizo C,Prados J,Aránega A

    更新日期:2013-01-01 00:00:00

  • Culture of iPSCs Derived Pancreatic β-Like Cells In Vitro Using Decellularized Pancreatic Scaffolds: A Preliminary Trial.

    abstract::Diabetes mellitus is a disease which has affected 415 million patients in 2015. In an effort to replace the significant demands on transplantation and morbidity associated with transplantation, the production of β-like cells differentiated from induced pluripotent stem cells (iPSCs) was evaluated. This approach is ass...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2017/4276928

    authors: Wan J,Huang Y,Zhou P,Guo Y,Wu C,Zhu S,Wang Y,Wang L,Lu Y,Wang Z

    更新日期:2017-01-01 00:00:00

  • Phytoremediation potential of Maná-Cubiu (Solanum sessiliflorum Dunal) for the deleterious effects of methylmercury on the reproductive system of rats.

    abstract::Methylmercury, organic form of mercury, can increase the number of abnormal sperm and decrease sperm concentration and testosterone levels possibly due to the damage caused by reactive species to germ and Leydig cells. Maná-cubiu (Solanum sessiliflorum Dunal) is a native fruit from Amazon rich in iron, zinc, niacin, p...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2014/309631

    authors: Frenedoso da Silva R,Missassi G,dos Santos Borges C,Silva de Paula E,Hornos Carneiro MF,Grotto D,Barbosa Junior F,De Grava Kempinas W

    更新日期:2014-01-01 00:00:00

  • A Method to Improve Electron Density Measurement of Cone-Beam CT Using Dual Energy Technique.

    abstract:PURPOSE:To develop a dual energy imaging method to improve the accuracy of electron density measurement with a cone-beam CT (CBCT) device. MATERIALS AND METHODS:The imaging system is the XVI CBCT system on Elekta Synergy linac. Projection data were acquired with the high and low energy X-ray, respectively, to set up a...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2015/858907

    authors: Men K,Dai JR,Li MH,Chen XY,Zhang K,Tian Y,Huang P,Xu YJ

    更新日期:2015-01-01 00:00:00

  • Netrins and their roles in placental angiogenesis.

    abstract::Netrins, a family of laminin-related proteins, were originally identified as axonal guidance molecules. Subsequently, netrins were found to modulate various biological processes including morphogenesis, tumorogenesis, adhesion, and, recently, angiogenesis. In human placenta, the most vascularized organ, the presence o...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2014/901941

    authors: Dakouane-Giudicelli M,Alfaidy N,de Mazancourt P

    更新日期:2014-01-01 00:00:00

  • Adenosine Generated by Regulatory T Cells Induces CD8+ T Cell Exhaustion in Gastric Cancer through A2aR Pathway.

    abstract:Background:Adenosine, derived from the degradation of ATP via ectonucleotidases CD39 and CD73, is a critical immunosuppressive metabolite in the hypoxic microenvironment of tumor tissue. Adenosine signaling via A2aR can inhibit the antitumor immune response of CD8+ T cells. CD39 and CD73 high-expressing Tregs play a cr...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2019/4093214

    authors: Shi L,Feng M,Du S,Wei X,Song H,Yixin X,Song J,Wenxian G

    更新日期:2019-12-14 00:00:00

  • Transforaminal Percutaneous Endoscopic Lumbar Decompression by Using Rigid Bendable Burr for Lumbar Lateral Recess Stenosis: Technique and Clinical Outcome.

    abstract:Background:Open laminectomy has been regarded as the standard surgical procedure for lumbar lateral recess stenosis during the last decades. Although percutaneous endoscopic lumbar decompression has led to successful results comparable with open decompression, its application in LSS with is still challenging and techni...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2018/2601232

    authors: Tang S,Jin S,Liao X,Huang K,Luo J,Zhu T

    更新日期:2018-11-26 00:00:00

  • Morphine Promotes Tumor Angiogenesis and Increases Breast Cancer Progression.

    abstract::Morphine is considered a highly potent analgesic agent used to relieve suffering of patients with cancer. Several in vitro and in vivo studies showed that morphine also modulates angiogenesis and regulates tumour cell growth. Unfortunately, the results obtained by these studies are still contradictory. In order to bet...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2015/161508

    authors: Bimonte S,Barbieri A,Rea D,Palma G,Luciano A,Cuomo A,Arra C,Izzo F

    更新日期:2015-01-01 00:00:00

  • Animal Models in Cardiovascular Research: Hypertension and Atherosclerosis.

    abstract::Hypertension and atherosclerosis are among the most common causes of mortality in both developed and developing countries. Experimental animal models of hypertension and atherosclerosis have become a valuable tool for providing information on etiology, pathophysiology, and complications of the disease and on the effic...

    journal_title:BioMed research international

    pub_type: 杂志文章,评审

    doi:10.1155/2015/528757

    authors: Leong XF,Ng CY,Jaarin K

    更新日期:2015-01-01 00:00:00

  • Effects of Direct Current Administration on Hyperhidrosis Disease Severity Scale in Patients with Axillary Hyperhidrosis.

    abstract:Background:Focal hyperhidrosis mostly affects the axillae, hands, feet, and face. For the management, several techniques are used. The aim of this study was to investigate the effects of direct current administration on the hyperhidrosis disease severity scale (HDSS) in patients with axillary hyperhidrosis that have va...

    journal_title:BioMed research international

    pub_type: 临床试验,杂志文章

    doi:10.1155/2019/3232015

    authors: Şener S,Karakoç Y

    更新日期:2019-10-31 00:00:00

  • The investigation of quality of life in 87 Chinese patients with disorders of sex development.

    abstract:OBJECTIVE:In the process of care for disorders of sex development (DSD), clinical decisions should focus on the long-term quality of life (QOL). We sought to investigate the QOL of patients with DSD in China. DESIGN:Case-control study was carried out. PATIENTS:90 patients of DSD participated in the study. Finally, 87...

    journal_title:BioMed research international

    pub_type: 临床试验,杂志文章

    doi:10.1155/2015/342420

    authors: Wang C,Tian Q

    更新日期:2015-01-01 00:00:00

  • Identification of the Sixth Complement Component as Potential Key Genes in Hepatocellular Carcinoma via Bioinformatics Analysis.

    abstract::The present study is designed to determine potential target genes involved in hepatocellular carcinoma (HCC) and provide possible underlying mechanisms of action. Several studies (GSE112790, GSE87630, and GSE56140) from the GEO database looking at molecular characteristics in HCC were screened and analyzed by GEO2R, w...

    journal_title:BioMed research international

    pub_type: 杂志文章

    doi:10.1155/2020/7042124

    authors: Mu D,Qin F,Li B,Zhou Q

    更新日期:2020-10-05 00:00:00