Shift of hindgut microbiota and microbial short chain fatty acids profiles in dairy calves from birth to pre-weaning.

abstract：:The aim of this study was to determine if arbuscular mycorrhizal (AM) colonisation influences rhizosphere bacteria differently depending on plant species. Thus, the effect of AM colonisation (Glomus intraradices) on rhizosphere bacteria of subterranean clover, cucumber, leek and maize was studied. The bacterial activi...

journal_title：FEMS microbiology ecology

authors： Söderberg KH,Olsson PA,Bååth E

更新日期：2002-06-01 00:00:00

abstract：:Bacterial communities in Arctic sea ice play an important role in the regulation of nutrient and energy dynamics in the Arctic Ocean. Sea ice has vertical gradients in temperature, brine salinity and volume, and light and UV levels. Multiyear ice (MYI) has at least two distinct ice layers: old fresh ice with limited p...

journal_title：FEMS microbiology ecology

authors： Hatam I,Charchuk R,Lange B,Beckers J,Haas C,Lanoil B

更新日期：2014-10-01 00:00:00

abstract：:Herbivorous fishes play important ecological roles in coral reefs by consuming algae that can otherwise outcompete corals, but we know little about the gut microbiota that facilitates this process. This study focussed on the gut microbiota of an ecologically important coral reef fish, the convict surgeonfish Acanthuru...

journal_title：FEMS microbiology ecology

authors： Parata L,Nielsen S,Xing X,Thomas T,Egan S,Vergés A

更新日期：2020-01-01 00:00:00

abstract：:Compared with the knowledge of sponge-associated bacterial diversity and ecological roles, the fungal diversity and ecological roles of sponges remain largely unknown. In this study, the fungal diversity and protein synthesis potential in two South China Sea sponges Theonella swinhoei and Xestospongia testudinaria wer...

journal_title：FEMS microbiology ecology

authors： Jin L,Liu F,Sun W,Zhang F,Karuppiah V,Li Z

更新日期：2014-12-01 00:00:00

abstract：:Koinobiont parasitoids regulate the physiology of their hosts, possibly interfering with the host gut microbiota and ultimately impacting parasitoid development. We used the parasitoid Cotesia flavipes to investigate if the regulation of the host would also affect the host gut microbiota. We also wondered if the effec...

journal_title：FEMS microbiology ecology

authors： Cavichiolli de Oliveira N,Cônsoli FL

更新日期：2020-02-01 00:00:00

abstract：:Integrating conjugative elements (ICEs) of the SXT/R391 family have been described in Vibrios, mainly Vibrio cholerae, and other bacteria as carriers of variable gene content conferring adaptive advantages upon their hosts, including antimicrobial resistance and motility regulation. However, our knowledge on their hos...

journal_title：FEMS microbiology ecology

authors： Balado M,Lemos ML,Osorio CR

更新日期：2013-02-01 00:00:00

abstract：:The microbial communities of in situ reactor columns degrading benzene with sulfate as an electron acceptor were analyzed based on clone libraries and terminal restriction fragment length polymorphism fingerprinting of PCR-amplified 16S rRNA genes. The columns were filled with either lava granules or sand particles an...

journal_title：FEMS microbiology ecology

authors： Kleinsteuber S,Schleinitz KM,Breitfeld J,Harms H,Richnow HH,Vogt C

更新日期：2008-10-01 00:00:00

abstract：:Tedania sp. is a dominant sponge that is ubiquitous along the southeast coast of China. High-throughput sequencing and transmission electron microscopy were used to describe a detailed profile of sponge-associated microbiomes at seven life stages: adult, embryo-containing spawning adult, embryo, pre-competent larva at...

journal_title：FEMS microbiology ecology

authors： Wu S,Ou H,Liu T,Wang D,Zhao J

更新日期：2018-05-01 00:00:00

abstract：:Recent studies revealed a high diversity of fungal endophytes in traded tree seeds, including potential plant pathogens. The factors determining richness and composition of seed mycobiomes are poorly understood, but might be an important determinant for tree health. We assessed the relative impact of host identity, si...

journal_title：FEMS microbiology ecology

authors： Franić I,Eschen R,Allan E,Hartmann M,Schneider S,Prospero S

更新日期：2020-09-01 00:00:00

abstract：:Rhipicephalus ticks are competent vectors of several pathogens, such as Spotted Fever Group Rickettsiae (SFGR) and many Babesia species. Within this genus, different R. sanguineus s.l. lineages show an unequal vector competence and resistance regarding some pathogenic strains. Current literature supports that tick end...

journal_title：FEMS microbiology ecology

authors： Coimbra-Dores MJ,Jaarsma RI,Carmo AO,Maia-Silva M,Fonville M,da Costa DFF,Brandão RML,Azevedo F,Casero M,Oliveira AC,Afonso SMS,Sprong H,Rosa F,Dias D

更新日期：2020-06-01 00:00:00

abstract：:Autotrophic ammonia-oxidising bacteria (AOB) are a crucial component of the microbial communities of nitrifying wastewater treatment systems. Nitrification is known to occur in reactors of different configuration, but whether AOB communities are different in reactors of different design is unknown. We compared the div...

journal_title：FEMS microbiology ecology

authors： Rowan AK,Snape JR,Fearnside D,Barer MR,Curtis TP,Head IM

更新日期：2003-03-01 00:00:00

abstract：:Soil microbes are essential to the continued productivity of sustainably managed agroecosystems. In shade coffee plantations, the relationship between soil microbial composition, soil nutrient availability and coffee productivity have been demonstrated, but the effects of management on the composition of the soil micr...

journal_title：FEMS microbiology ecology

authors： Jurburg SD,Shek KL,McGuire K

更新日期：2020-09-01 00:00:00

abstract：:A total of 159 endophytic bacteria were isolated from surface-sterilized root nodules of wild perennial Glycyrrhiza legumes growing on 40 sites in central and northwestern China. Amplified fragment length polymorphism (AFLP) genomic fingerprinting and sequencing of partial 16S rRNA genes revealed that the collection m...

journal_title：FEMS microbiology ecology

authors： Li L,Sinkko H,Montonen L,Wei G,Lindström K,Räsänen LA

更新日期：2012-01-01 00:00:00

abstract：:The effect of a brief (24 h) temperature shift to 4 degrees C (low-temperature stress) or 50 degrees C (high-temperature stress) was studied in methanogenic slurries of Italian rice field soil incubated at either constant 30 degrees C or 15 degrees C. Low-temperature (low-T) stress showed no effect in either the 30 de...

journal_title：FEMS microbiology ecology

authors： Wu XL,Chin KJ,Conrad R

更新日期：2002-03-01 00:00:00

abstract：:The alveolate microalga Chromera velia is an evolutionarily significant organism, representing the closest photosynthetic relative of the parasitic Apicomplexa. Chromera velia has been detected in and isolated from several stony corals and can be readily cultured in vitro under strictly autotrophic conditions. However...

journal_title：FEMS microbiology ecology

authors： Foster C,Portman N,Chen M,Šlapeta J

更新日期：2014-04-01 00:00:00

abstract：:This study analysed the nitrifier community in the biofilter of a zero discharge, recirculating aquaculture system (RAS) for the production of marine shrimp in a low density (low ammonium production) system. The ammonia-oxidizing populations were examined by targeting 16S rRNA and amoA genes of ammonia-oxidizing bacte...

journal_title：FEMS microbiology ecology

authors： Brown MN,Briones A,Diana J,Raskin L

更新日期：2013-01-01 00:00:00

abstract：:Many studies demonstrate the importance of the commensal microbiomes to animal health and development. However, the initial community assembly process is poorly understood. It is unclear to what extent the hosts select for their commensal microbiota, whether stochastic processes contribute, and how environmental condi...

journal_title：FEMS microbiology ecology

authors： Vestrum RI,Attramadal KJK,Vadstein O,Gundersen MS,Bakke I

更新日期：2020-09-01 00:00:00

abstract：:Aerobic anoxygenic phototrophic bacteria (AAPB) are a group of heterotrophic bacteria capable of photosynthesis. The dynamics of AAPB in the East China Sea, a typical marginal sea characterized by diverse physical-chemical and ecological conditions, were investigated from April 2002 to September 2003. The results show...

journal_title：FEMS microbiology ecology

authors： Zhang Y,Jiao N

更新日期：2007-09-01 00:00:00

abstract：:The effects of nutrient additions and grazing by macro-invertebrates on periphyton-associated algae and bacteria were studied by performing an enclosure experiment on three occasions from early spring to summer at mesotrophic Lake Erken and Väddö, at the Swedish Baltic coast. There were significant interactions betwee...

journal_title：FEMS microbiology ecology

authors： Haglund AL,Hillebrand H

更新日期：2005-03-01 00:00:00

abstract：:Definition of lichens has evolved from bi(tri)partite associations to multi-species symbioses, where bacteria would play essential roles. Besides, although soil bacterial communities are known to be affected by edaphic factors, when lichens grow upon them these could become less preponderant. We hypothesized that the ...

journal_title：FEMS microbiology ecology

authors： Leiva D,Clavero-León C,Carú M,Orlando J

更新日期：2016-11-01 00:00:00

abstract：:Occurrence of entomopathogenic fungi on phylloplanes in Tilia × europaea crowns between 1 and 13 m was assessed in urban parks. Prevalence of fungal infections in ladybirds (Coleoptera: Coccinellidae) collected from Tilia × europaea was assessed to determine whether fungi found on phylloplanes also occurred as infecti...

journal_title：FEMS microbiology ecology

authors： Howe AG,Ravn HP,Jensen AB,Meyling NV

更新日期：2016-09-01 00:00:00

abstract：:Polycyclic aromatic hydrocarbons (PAHs) are some of the most widespread xenobiotic pollutants, with the potentially carcinogenic high-molecular-weight representatives being of particular interest. However, while in eukaryotes, the cytochrome P450 (CYP)-mediated activation of benzo[a]pyrene (B[a]P) has become a model f...

journal_title：FEMS microbiology ecology

authors： Sowada J,Schmalenberger A,Ebner I,Luch A,Tralau T

更新日期：2014-04-01 00:00:00

abstract：:Despite predicted global warming, the temperature effects on headwater stream functioning are poorly understood. We studied these effects on microbial-mediated leaf decomposition and the performance of associated aquatic hyphomycete assemblages. Alder leaves were incubated in three streams differing in winter water te...

journal_title：FEMS microbiology ecology

authors： Martínez A,Larrañaga A,Pérez J,Descals E,Pozo J

更新日期：2014-01-01 00:00:00

abstract：:The Capuchin Catacombs of Palermo contain over 1800 preserved bodies dating from the 16th to 20th centuries AD and showing evidence of biodeterioration. An extensive microbiological and molecular investigation was recently performed. Samples were taken from skin, muscle, hair, bone, stuffing materials, clothes, and su...

journal_title：FEMS microbiology ecology

authors： Piñar G,Piombino-Mascali D,Maixner F,Zink A,Sterflinger K

更新日期：2013-11-01 00:00:00

abstract：:Pseudomonas pseudoalcaligenes KF707 is a polychlorinated biphenyls (PCBs) degrader, also tolerant to several toxic metals and metalloids. The work presented here examines for the first time the chemotactic response of P. pseudoalcaligenes KF707 to biphenyl and intermediates of the PCB biodegradation pathway in the pre...

journal_title：FEMS microbiology ecology

authors： Tremaroli V,Vacchi Suzzi C,Fedi S,Ceri H,Zannoni D,Turner RJ

更新日期：2010-11-01 00:00:00

abstract：:Phytate-mineralizing rhizobacteria (PMR) perform an essential function for the mineralization of organic phosphorus but little is known about their ecology in soils and rhizosphere. In this study, PCR-based methods were developed for detection and quantification of the Bacillus β-propeller phytase (BPP) gene. Experime...

journal_title：FEMS microbiology ecology

authors： Jorquera MA,Saavedra N,Maruyama F,Richardson AE,Crowley DE,del C Catrilaf R,Henriquez EJ,de la Luz Mora M

更新日期：2013-02-01 00:00:00

abstract：:Matrix-embedded, surface-attached microbial communities, known as biofilms, profusely colonise industrial cooling water systems, where the availability of nutrients and organic matter favours rapid microbial proliferation and their adhesion to surfaces in the evaporative fill material, heat exchangers, water reservoir...

journal_title：FEMS microbiology ecology

authors： Di Pippo F,Di Gregorio L,Congestri R,Tandoi V,Rossetti S

更新日期：2018-05-01 00:00:00

abstract：:The McMurdo Dry Valleys collectively comprise the most extensive ice-free region in Antarctica and are considered one of the coldest arid environments on Earth. In low-altitude maritime-associated valleys, mineral soil profiles show distinct horizontal structuring, with a surface arid zone overlying a moist and biolog...

journal_title：FEMS microbiology ecology

authors： Stomeo F,Makhalanyane TP,Valverde A,Pointing SB,Stevens MI,Cary CS,Tuffin MI,Cowan DA

更新日期：2012-11-01 00:00:00

abstract：:Maintaining beneficial interactions with microbial symbionts is vital for animal health. Yet, for social insects, the stability of microbial associations within and between cohorts is largely unknown. We investigated temporal changes in the microbiomes of nine stingless bee (Tetragonula carbonaria) colonies at seven t...

journal_title：FEMS microbiology ecology

authors： Hall MA,Brettell LE,Liu H,Nacko S,Spooner-Hart R,Riegler M,Cook JM

更新日期：2020-12-30 00:00:00

abstract：:Abstract The protocol used in the present study was a long-term mesocosm experiment where the microbial succession around live barley roots and subsequent decomposing roots was assessed after seed coating with either the antagonistic strain Pseudomonas fluorescens DR54-BN14 or the fungicide imazalil. Four diversity me...

journal_title：FEMS microbiology ecology

authors： Thirup L,Johansen A,Winding A

更新日期：2003-04-01 00:00:00