The Informatics Challenges Facing Biobanks: A Perspective from a United Kingdom Biobanking Network.

abstract：:Cryopreservation is a recognized method for the maintenance of Leptospira collections. Although cryoprotectants are commonly used in order to prevent or reduce the adverse effects of freezing, there is no consensus regarding the protocols of cryopreservation. This study aimed to compare cryopreservation protocols for ...

journal_title：Biopreservation and biobanking

authors： Narduche L,Hamond C,Martins GM,Medeiros MA,Lilenbaum W

更新日期：2016-02-01 00:00:00

abstract：:Formalin fixation is known to inactivate most viruses in a vaccine production context, but nothing is published about virus activity in tissues treated with alternative, non-crosslinking fixatives. We used a model assay based on cell culture to test formalin and PAXgene Tissue fixative for their virus-inactivating abi...

journal_title：Biopreservation and biobanking

authors： Kap M,Arron GI,Loibner M,Hausleitner A,Siaulyte G,Zatloukal K,Murk JL,Riegman P

更新日期：2013-08-01 00:00:00

abstract：INTRODUCTION:Biobanking is a relatively new concept in the Arab region. Targeting different stakeholders to introduce the concept of biobanking and develop an acceptance of it among them is important for the growth of biobanking in the region. Undergraduate students of life sciences represent an important segment of st...

journal_title：Biopreservation and biobanking

authors： Abdelhafiz AS,Fouda MA,El-Jaafary SI,Farghly MI,Salem M,Tammam A,Gabr H

更新日期：2017-08-01 00:00:00

abstract：:A paucity of information exists on the recruitment of Asian Americans for biospecimen research. Although studies show that Chinese Americans are at high risk for hepatitis B virus (HBV) infection, little is known about their willingness to participate in HBV-related biospecimen research and how knowledge, attitudes, a...

journal_title：Biopreservation and biobanking

authors： Gao W,Ma GX,Tan Y,Fang C,Weaver J,Jin M,Lai P

更新日期：2014-04-01 00:00:00

abstract：:Following its emergence in December 2019, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) caused what rapidly became a global pandemic. The precise origin and subsequent path of transmission have not yet been established-but like the other novel coronaviruses that it closely resembles, it appears to have ...

journal_title：Biopreservation and biobanking

authors： Knight TE

更新日期：2020-12-01 00:00:00

abstract：:The past 15 years has seen considerable changes in the research environment. These changes include the development of new sophisticated genetic and genomic technologies, a proliferation of databases containing large amount of genotypic and phenotypic data, and wide-spread data sharing among many institutions, national...

journal_title：Biopreservation and biobanking

authors： Bledsoe MJ

更新日期：2017-04-01 00:00:00

abstract：:Sharing data in biomedical contexts has become increasingly relevant, but privacy concerns set constraints for free sharing of individual-level data. Data protection law protects only data relating to an identifiable individual, whereas "anonymous" data are free to be used by everybody. Usage of many terms related to ...

journal_title：Biopreservation and biobanking

authors： Sariyar M,Schlünder I

更新日期：2016-10-01 00:00:00

abstract：BACKGROUND:Biopsies extracted from brain cancer patients often display degraded ribosomal RNA, which makes them unusable in transcriptomic experiments. This has not been properly documented in previous works aimed at refining the molecular classification of brain cancer. OBJECTIVE:To determine RNA integrity in a large...

journal_title：Biopreservation and biobanking

authors： Castells Domingo X,Ferrer-Font L,Davila M,Candiota AP,Simões RV,Fernández-Coello A,Gabarrós A,Boluda S,Barceló A,Ariño J,Arús C

更新日期：2016-04-01 00:00:00

abstract：:Cryopreservation, which refers to preservation of cells or tissues at subzero temperatures, inevitably involves the problem of cryoinjury caused by ice crystals. The application of an external electric field during the freezing process has been shown to be a promising approach to produce miniature ice grains and decre...

journal_title：Biopreservation and biobanking

authors： Ma Y,Fan X,Cai J,Tao J

更新日期：2020-10-16 00:00:00

abstract：:Biobanking biological samples involve multiple handling, processing, and labeling steps. Each step may be a source of error, which if unnoticed or uncorrected may have consequences for research. We aimed to develop a simple and inexpensive genotyping method that would be valuable to detect such errors and confirm samp...

journal_title：Biopreservation and biobanking

authors： Pellerin C,McKercher G,Aprikian AG,Saad F,Lacombe L,Carmel M,Chevalier S

更新日期：2016-10-01 00:00:00

abstract：:Over the past two decades, researchers have increasingly used human biospecimens to evaluate hypotheses related to disease risk, outcomes and treatment. We conducted an analysis of population-science cancer research grants funded by the National Cancer Institute (NCI) to gain a more comprehensive understanding of bios...

journal_title：Biopreservation and biobanking

authors： Carrick DM,Mette E,Hoyle B,Rogers SD,Gillanders EM,Schully SD,Mechanic LE

更新日期：2014-08-01 00:00:00

abstract：:The COVID-19 era has brought about a number of novel challenges for the global biobanking community. An array of diverse tools (e.g., standards, best practices, and plans) exists to support quality and fitness-for-purpose in biobank operations. The International Society for Biological and Environmental Repositories (I...

journal_title：Biopreservation and biobanking

authors： Allocca CM,Snapes E,Albert M,Bledsoe MJ,Castelhano MG,De Wilde M,Furuta K,Kozlakidis Z,Martin D,Martins A,McCall SJ,Schacter B

更新日期：2020-12-01 00:00:00

abstract：:Adipose tissue, which is harvested in large quantities during liposuction, has no blood supply and becomes necrotic within a few hours, if not immediately transplanted. Cryopreservation of adipose tissue allows these samples to be stored and used in diverse fundamental experiments, especially in fat-grafting animal te...

journal_title：Biopreservation and biobanking

authors： Gu L,Sun Y,Wang P,Liu L,Gu J

更新日期：2020-10-09 00:00:00

abstract：:Due to the requirement for comprehensive clinical research efforts in China, the importance of biobanking in modern clinical research is outlined in this overview. Hospitals, universities, and research institutes have been well organized as fundamental resources for Chinese biobanking initiatives and the resulting bio...

journal_title：Biopreservation and biobanking

authors： Gan R,Wang H,Song Y,Fan J,Xiong Y

更新日期：2015-02-01 00:00:00

abstract：:This is a two-part review describing the planning, engineering, and design considerations for building a new repository for biological and environmental samples. Part I addresses the physical infrastructure requirements for a repository; Part II will cover equipment and costing. Planning for construction of a new repo...

journal_title：Biopreservation and biobanking

authors： Baird PM,Gunter EW

更新日期：2016-04-01 00:00:00

abstract：:Modern taxonomy requires the preservation of biospecimens for both morphological and molecular applications. The utility of a previously identified preservative, dimethyldimethylhydantoin hydantoin (Dekafald®), to retain both physical diagnostic traits and the DNA integrity of biological specimens remains unknown. Usi...

journal_title：Biopreservation and biobanking

authors： Bourque DA,Morey KC,Bradley DL,Fost B,Daley JM,Jacobson N,Naaum AM,Hanner RH

更新日期：2020-08-01 00:00:00

abstract：:The DNA barcoding technique is often used as a tool for validating species identity in biobanks. In the case of amphibians, the mitochondrial DNA (mtDNA) 16S ribosomal RNA (rRNA) gene is reported to fulfill the requirements of a universal DNA barcoding marker. The 16S primers are designed to specifically bind to the 1...

journal_title：Biopreservation and biobanking

authors： Maya-Soriano MJ,Holt WV,Lloyd RE

更新日期：2012-02-01 00:00:00

abstract：:Carboxylated poly-l-lysine (CPLL), an ampholytic polymer, has remarkable cryoprotective properties. It was hypothesized that CPLL will reduce/replace glycerol in extender and improve the freezability of buffalo semen. The objective was to evaluate various combinations of CPLL and glycerol in extenders for any synergis...

journal_title：Biopreservation and biobanking

authors： Akhter S,Awan MA,Arshad J,Rakha BA,Ansari MS,Iqbal S

更新日期：2020-10-01 00:00:00

abstract：:Tissues from postmortem transplantation donors are a viable and productive option for genomic research. This entails obtaining authorization from the family decision makers (FDMs) of deceased donors. This study examined best practices for making such requests within the context of the Genotype-Tissue Expression (GTEx)...

journal_title：Biopreservation and biobanking

authors： Siminoff LA,Wilson-Genderson M,Gardiner HM,Mosavel M,Barker KL

更新日期：2018-06-01 00:00:00

abstract：:The Beaumont Health System BioBank was established in 2008, not only to leverage the potential to collect biospecimens for translational research, but to undertake such research in a seamless facility that combined high quality biobanking with state-of-the-art laboratory platforms geared towards biospecimen-based rese...

journal_title：Biopreservation and biobanking

authors： Wilson GD,D'Angelo K,Pruetz BL,Geddes TJ,Larson DM,Akervall J

更新日期：2014-10-01 00:00:00

abstract：:The consent process involves three steps; referral for contact, preliminary interview, and informed consent discussion. We propose that the efficiency and frequency of the consent process for individual biobank related projects increases when the referral for contact is conducted by an independent "Permission to Conta...

journal_title：Biopreservation and biobanking

authors： LeBlanc J,Dee S,Braun L,Daudt H,Cheah S,Watson PH

更新日期：2013-06-01 00:00:00

abstract：:Insulin-dependent diabetes mellitus is one of the leading causes of death world-wide. Donor-derived pancreas and Islet of Langerhans transplantation are potential cures; however, postmortem ischemia impacts islet quality. The murine βt3 cell line was employed as a model to study cell viability and proliferation after ...

journal_title：Biopreservation and biobanking

authors： Campbell LH,Taylor MJ,Brockbank KG

更新日期：2013-02-01 00:00:00

abstract：:The social structures that govern data/sample release aim to safeguard the confidentiality and privacy of cohort research participants (without whom there would be no data or samples) and enable the realization of societal benefit through optimizing the scientific use of those cohorts. Within collaborations involving ...

journal_title：Biopreservation and biobanking

authors： Murtagh MJ,Turner A,Minion JT,Fay M,Burton PR

更新日期：2016-06-01 00:00:00

abstract：:Biobanking at Duke University has existed for decades and has grown over time in silos and based on specialized needs, as is true with most biomedical research centers. These silos developed informatics systems to support their own individual requirements, with no regard for semantic or syntactic interoperability. Duk...

journal_title：Biopreservation and biobanking

authors： Ellis H,Joshi MB,Lynn AJ,Walden A

更新日期：2017-04-01 00:00:00

abstract：:In Poland storage of human biological samples takes place at most universities and scientific institutions conducting research projects in the field of biomedicine. The First International Biobanking Conference organized by the Ministry of Science and Higher Education in 2014 shed a light on the situation of Polish bi...

journal_title：Biopreservation and biobanking

authors： Witoń M,Strapagiel D,Gleńska-Olender J,Chróścicka A,Ferdyn K,Skokowski J,Kalinowski L,Pawlikowski J,Marciniak B,Pasterk M,Matera-Witkiewicz A,Kozera Ł

更新日期：2017-06-01 00:00:00

abstract：:The advent of molecular characterization of tissues has brought an increasing emphasis on the quality of biospecimens, starting with the tissue procurement process. RNA levels are particularly affected by factors in the collection process, but the influence of different pre-analytical factors is not well understood. H...

journal_title：Biopreservation and biobanking

authors： Kap M,Sieuwerts AM,Kubista M,Oomen M,Arshad S,Riegman P

更新日期：2015-06-01 00:00:00

abstract：:Biobanks and biobanking networks are involved in varying degrees in the collection, processing, storage, and dissemination of biological specimens. This review outlines the approaches that 16 of the largest biobanks and biobanking networks in Europe, North America, Australia, and Asia have taken to collecting and dist...

journal_title：Biopreservation and biobanking

authors： Vaught J,Kelly A,Hewitt R

更新日期：2009-09-01 00:00:00

abstract：:Tissue banks represent essential resources and platforms for biomedical research serving basic, translational, and clinical research projects. In this article, we describe 2 models of biobanking and tissue preservation with different approaches and aims. Archive tissue biobanking is described here as a resource of res...

journal_title：Biopreservation and biobanking

authors： Stanta G,Bonin S,Machado I,Llombart-Bosch A

更新日期：2011-06-01 00:00:00

abstract：:Disease advocacy organizations play an increased role in the development and management of registries and biorepositories. Genetic Alliance developed criteria to assist organizations in selecting vendors and conducted a technical assessment survey of potential vendors. More than half offered customizable solutions, an...

journal_title：Biopreservation and biobanking

authors： Horn EJ,Bialick JF,Terry SF

更新日期：2010-06-01 00:00:00

abstract：:Systematic cryo-banking of reproductive tissues could enhance reproductive management and ensure sustainability of rare mammalian genotypes. Testicular tissues contain a vast number of germ cells, including at early stages (spermatogonia and spermatocytes), that can potentially develop into viable spermatozoa after gr...

journal_title：Biopreservation and biobanking

authors： Silva AMD,Pereira AF,Comizzoli P,Silva AR

更新日期：2020-06-01 00:00:00