Threonine inhibition of the aspartokinase--homoserine dehydrogenase I of Escherichia coli. Threonine binding studies.

Abstract:

:Both activities of the aspartokinase--homoserine I (AK-HSD) of Escherichia coli are inhibited by threonine. Careful threonine binding studies have now been done which have allowed us to distinguish the various effects of threonine on the enzyme. The ultrafiltration technique of H. Paulus ((1969) Anal. Biochem. 32, 101) for measuring ligand binding was shown to be comparable with equilibrium dialysis techniques. Reduction in error by utilization of this procedure enabled us to obtain evidence for two different sets of threonine sites by direct binding studies. The binding data were mathematically consistent with two independent classes of threonine sites, each of which contained four sites per tetramer and had a Hill coefficient of about 2.3--2.5. KD for the second set of sites was five- to tenfold greater than the high affinity sites, depending upon conditions. The data now suggest that the sequential model for site--site interactions adequately describes the cooperativity of threonine binding to the high affinity set of sites.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Bearer CF,Neet KE

doi

10.1021/bi00610a014

subject

Has Abstract

pub_date

1978-08-22 00:00:00

pages

3512-6

issue

17

eissn

0006-2960

issn

1520-4995

journal_volume

17

pub_type

杂志文章
  • How fumarase recycles after the malate --> fumarate reaction. Insights into the reaction mechanism.

    abstract::Recycling of yeast fumarase to permit repetition of its reaction chemistry requires two proton transfers and two conformational changes, in pathways that are different in detail but thematically similar in the two directions. In the malate --> fumarate direction, simple anions such as acetate accelerate the fumarate-o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9821521

    authors: Rose IA

    更新日期:1998-12-22 00:00:00

  • Crystal structure of rat apo-heme oxygenase-1 (HO-1): mechanism of heme binding in HO-1 inferred from structural comparison of the apo and heme complex forms.

    abstract::Heme oxygenase (HO) catalyzes the oxidative cleavage of heme to biliverdin by utilizing O(2) and NADPH. HO (apoHO) was crystallized as twinned P3(2) with three molecules per asymmetric unit, and its crystal structure was determined at 2.55 A resolution. Structural comparison of apoHO and its complex with heme (HO-heme...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi025662a

    authors: Sugishima M,Sakamoto H,Kakuta Y,Omata Y,Hayashi S,Noguchi M,Fukuyama K

    更新日期:2002-06-11 00:00:00

  • Substrate-induced changes in the dynamics of rhodopsin kinase (G protein-coupled receptor kinase 1).

    abstract::G protein-coupled receptor (GPCR) kinases (GRKs) instigate the desensitization of activated GPCRs via phosphorylation that promotes interaction with arrestins, thereby preventing the interaction of GPCRs with heterotrimeric G proteins. A current proposed model of GRK1 activation involves the binding of activated rhodo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi300295y

    authors: Orban T,Huang CC,Homan KT,Jastrzebska B,Tesmer JJ,Palczewski K

    更新日期:2012-04-24 00:00:00

  • Membrane fusion activity of the influenza virus hemagglutinin: interaction of HA2 N-terminal peptides with phospholipid vesicles.

    abstract::We have investigated the interaction of a number of synthetic 20-residue peptides, corresponding to the HA2 N-terminus of the influenza virus hemagglutinin (X31 strain), with phospholipid vesicles and monolayers. Besides the wild-type sequence, two peptides were studied with mutations corresponding to those previously...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00106a020

    authors: Rafalski M,Ortiz A,Rockwell A,van Ginkel LC,Lear JD,DeGrado WF,Wilschut J

    更新日期:1991-10-22 00:00:00

  • Temperature dependence of the epidermal growth factor receptor signaling network can be accounted for by a kinetic model.

    abstract::Stimulation of isolated hepatocytes with epidermal growth factor (EGF) causes rapid tyrosine phosphorylation of the EGF receptor (EGFR) and adapter/target proteins, which was monitored with 1 and 2 s resolution at 37, 20, and 4 degrees C. The temporal responses detected for multiple signaling proteins involve both tra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011506c

    authors: Moehren G,Markevich N,Demin O,Kiyatkin A,Goryanin I,Hoek JB,Kholodenko BN

    更新日期:2002-01-08 00:00:00

  • Resonance Raman spectroscopic measurements delineate the structural changes that occur during tau fibril formation.

    abstract::The aggregation of the microtubule-associated protein, tau, into amyloid fibrils is a hallmark of neurodegenerative diseases such as the tauopathies and Alzheimer's disease. Since monomeric tau is an intrinsically disordered protein and the polymeric fibrils possess an ordered cross-β core, the aggregation process is ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi500528x

    authors: Ramachandran G,Milán-Garcés EA,Udgaonkar JB,Puranik M

    更新日期:2014-10-21 00:00:00

  • Substitution of Tyr254 with Phe at the active site of flavocytochrome b2: consequences on catalysis of lactate dehydrogenation.

    abstract::A role for Tyr254 in L-lactate dehydrogenation catalyzed by flavocytochrome b2 has recently been proposed on the basis of the known active-site structure and of studies that had suggested a mechanism involving the initial formation of a lactate carbanion [Lederer, F., & Mathews, F.S. (1987) in Flavins and Flavoprotein...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00479a008

    authors: Dubois J,Chapman SK,Mathews FS,Reid GA,Lederer F

    更新日期:1990-07-10 00:00:00

  • The complete amino acid sequence of the major component myoglobin of dwarf sperm whale (Kogia simus).

    abstract::The complete amino acid sequence of the major component myoglobin from the dwarf sperm whale, Kogia simus, was determined by specific cleavage of the protein to obtain large peptides which are readily degraded by the automatic sequenator. Three easily separable peptides were obtained by cleaving the protein at its two...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00624a010

    authors: Dwulet FE,Jones BN,Lehman LD,Gurd FR

    更新日期:1977-03-08 00:00:00

  • Directed evolution of highly homologous proteins with different folds by phage display: implications for the protein folding code.

    abstract::To better understand how amino acid sequences specify unique tertiary folds, we have used random mutagenesis and phage display selection to evolve proteins with a high degree of sequence identity but different tertiary structures (homologous heteromorphs). The starting proteins in this evolutionary process were the Ig...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051231r

    authors: Alexander PA,Rozak DA,Orban J,Bryan PN

    更新日期:2005-11-01 00:00:00

  • Structure, spectroscopic, and redox properties of Rhodobacter sphaeroides reaction centers bearing point mutations near the primary electron donor.

    abstract::Single mutations of three amino acid residues in the vicinity of the primary electron donor, P, in the reaction center (RC) from Rhodobacter (Rb.) sphaeroides were constructed and characterized in order to study the effects of hydrogen-bonding on the physical properties of P. The mutations, Phe M197-->Tyr, Met L248-->...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00210a041

    authors: Wachtveitl J,Farchaus JW,Das R,Lutz M,Robert B,Mattioli TA

    更新日期:1993-11-30 00:00:00

  • Studies of the interaction of the viral suppressor of RNA silencing protein p19 with small RNAs using fluorescence polarization.

    abstract::Tombusviruses use a 19 kDa protein (p19) as a suppressor of the RNA silencing pathway during infection. The p19 protein binds to short-interfering RNA (siRNA) as a dimer and shows a high selectivity for short duplex RNAs over other RNA species. Since p19 can bind to synthetic and RNA silencing generated small RNAs wit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800401y

    authors: Cheng J,Sagan SM,Jakubek ZJ,Pezacki JP

    更新日期:2008-08-05 00:00:00

  • Synthesis and properties of azidonitrophenyl pyrophosphate, a photoaffinity probe of the nucleotide binding sites of mitochondrial F1-ATPase.

    abstract::4-Azido-2-nitrophenyl pyrophosphate (azido-PPi) labeled with 32P in the alpha position was prepared and used to photolabel beef heart mitochondrial F1. Azido-PPi was hydrolyzed by yeast inorganic pyrophosphatase, but not by mitochondrial F1-ATPase. Incubation of F1 with [alpha-32P]azido-PPi in the dark under condition...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00452a021

    authors: Michel L,Garin J,Issartel JP,Vignais PV

    更新日期:1989-12-26 00:00:00

  • Mutations affecting the activity of toxic shock syndrome toxin-1.

    abstract::Toxic shock syndrome toxin-1 (TSST-1), the potent staphylococcal exoprotein linked to most cases of the toxic shock syndrome, is a V beta-restricted T-cell mitogen (a so-called "superantigen"). TSST-ovine (TSST-O) is a natural variant of TSST-1, and is produced by certain ovine mastitis-associated strains of Staphyloc...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00209a016

    authors: Deresiewicz RL,Woo J,Chan M,Finberg RW,Kasper DL

    更新日期:1994-11-01 00:00:00

  • Decreased amyloidogenicity caused by mutational modulation of surface properties of the immunoglobulin light chain BRE variable domain.

    abstract::Amyloid formation by immunoglobulin light chain (LC) proteins is associated with amyloid light chain (AL) amyloidosis. Destabilization of the native state of the variable domain of the LC (VL) is known to be one of the critical factors in promoting the formation of amyloid fibrils. However, determining the key residue...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi5007892

    authors: Kobayashi Y,Tsutsumi H,Abe T,Ikeda K,Tashiro Y,Unzai S,Kamikubo H,Kataoka M,Hiroaki H,Hamada D

    更新日期:2014-08-12 00:00:00

  • The function of the chloride ion in photosynthetic oxygen evolution.

    abstract::The involvement of Cl(-) and several other monovalent anions in photosynthetic oxygen evolution was studied using photosystem II membranes depleted of Cl(-) by dialysis. The results of these studies differ significantly from results obtained using other depletion methods. Binding studies with glycerol as a cryoprotect...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi026175y

    authors: Olesen K,Andréasson LE

    更新日期:2003-02-25 00:00:00

  • Mapping of the cleavage-associated bleomycin binding site on DNA with a new method based on site-specific blockage of the minor groove with N2-isobutyrylguanine.

    abstract::Although the binding of various forms of bleomycin to DNA has been studied extensively, the transient nature of the activated bleomycin species which ultimately attacks DNA has largely precluded direct examination of its physical interactions with DNA. In an attempt to map the minimum binding site required for this sp...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi962957d

    authors: Suh D,Povirk LF

    更新日期:1997-04-08 00:00:00

  • Indoleglycerol phosphate synthase-phosphoribosyl anthranilate isomerase: comparison of the bifunctional enzyme from Escherichia coli with engineered monofunctional domains.

    abstract::Putative domain--domain interactions of the monomeric bifunctional enzyme indoleglycerol phosphate synthase:phosphoribosyl anthranilate isomerase from Escherichia coli were probed by separating the domains on the gene level and expressing them as monofunctional proteins. The engineered monofunctional enzymes were foun...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00016a013

    authors: Eberhard M,Tsai-Pflugfelder M,Bolewska K,Hommel U,Kirschner K

    更新日期:1995-04-25 00:00:00

  • Differential induction of pS2 and cathepsin D mRNAs by structurally altered estrogens.

    abstract::The influence of structural alterations to the estradiol-17 beta (E2) molecule on the induction of pS2 and Cathepsin D (Cath D) mRNAs has been examined by Northern analysis of RNA extracted from MCF-7 cells. Exposure of cultures to estratriene did not affect the level of expression of these estrogen-responsive genes. ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00078a028

    authors: Pilat MJ,Hafner MS,Kral LG,Brooks SC

    更新日期:1993-07-13 00:00:00

  • Binding of Escherichia coli ribonucleic acid polymerase holoenzyme to a bacteriophage T7 promoter-containing fragment: selectivity exists over a wide range of solution conditions.

    abstract::The selectivity of binding of Escherichia coli RNA polymerase holoenzyme to a promoter-containing fragment of T7 DNA has been investigated over a range of solution conditions by using a double-label nitrocellulose filter binding assay. A 32P-labeled HaeIII restriction fragment of T7 D111 DNA containing the A1 and D pr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00556a014

    authors: Strauss HS,Burgess RR,Record MT Jr

    更新日期:1980-07-22 00:00:00

  • Electron transfer within xanthine oxidase: a solvent kinetic isotope effect study.

    abstract::Solvent kinetic isotope effect studies of electron transfer within xanthine oxidase have been performed, using a stopped-flow pH-jump technique to perturb the distribution of reducing equivalents within partially reduced enzyme and follow the kinetics of reequilibration spectrophotometrically. It is found that the rat...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00099a004

    authors: Hille R

    更新日期:1991-09-03 00:00:00

  • Mechanisms of specific and nonspecific binding of architectural proteins in prokaryotic gene regulation.

    abstract::IHF and HU are small basic proteins of eubacteria that bind as homodimers to double-stranded DNA and bend the duplex to promote architectures required for gene regulation. These architectural proteins share a common alpha/beta fold but exhibit different nucleic acid binding surfaces and distinct functional roles. With...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi7009426

    authors: Benevides JM,Danahy J,Kawakami J,Thomas GJ Jr

    更新日期:2008-03-25 00:00:00

  • Translational control of gene expression in a normal fibroblast. Characterization of a subclass of mRNAs with unusual kinetic properties.

    abstract::The translation of a small number of mRNAs in mouse SC-1 fibroblasts can be stimulated by cycloheximide, under conditions where the synthesis of most proteins is inhibited. These mRNAs are ordinarily present in small polyribosomes or messenger ribonucleoprotein particles, although the addition of cycloheximide drives ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00356a030

    authors: Walden WE,Thach RE

    更新日期:1986-04-22 00:00:00

  • Specific interaction of wild-type and truncated mouse N-methylpurine-DNA glycosylase with ethenoadenine-containing DNA.

    abstract::N-Methylpurine-DNA glycosylase (MPG), a ubiquitous DNA repair enzyme, is responsible for the removal of a wide variety of alkylated base lesions in DNA, e.g., N-alkylpurines and cyclic ethenoadducts of adenine, guanine, and cytosine. These lesions, some of which are mutagenic and toxic, are generated endogenously or b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972313l

    authors: Roy R,Biswas T,Hazra TK,Roy G,Grabowski DT,Izumi T,Srinivasan G,Mitra S

    更新日期:1998-01-13 00:00:00

  • Catalytic mechanism of enzymes: preorganization, short strong hydrogen bond, and charge buffering.

    abstract::During the past decade, there has been much debate about the enormous catalytic rate enhancement observed in enzymatic reactions involving carbanion intermediates. Our recent theoretical study has demonstrated the importance of the short strong hydrogen bond (SSHB) in the enzymatic reactions. Nevertheless, other recen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0255118

    authors: Kim KS,Kim D,Lee JY,Tarakeshwar P,Oh KS

    更新日期:2002-04-23 00:00:00

  • Solution conformations of GM3 gangliosides containing different sialic acid residues as revealed by NOE-based distance mapping, molecular mechanics, and molecular dynamics calculations.

    abstract::The conformation of the GM3 ganglioside, Neu5Ac alpha 2-3Gal beta 1-4Glc beta 1-1 Cer, and its analogs containing the Neu5Gc or Neu4Ac5Gc residues (Gc = glycolyl, CH2OHCO) was investigated in Me2SO-d6 solution with the aid of a distance-mapping procedure based on rotating-frame NOE contacts, with hydroxyl protons bein...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00145a014

    authors: Siebert HC,Reuter G,Schauer R,von der Lieth CW,Dabrowski J

    更新日期:1992-08-04 00:00:00

  • Human ferrochelatase is an iron-sulfur protein.

    abstract::Recombinant human ferrochelatase has been expressed in Escherichia coli and purified to homogeneity. Metal analyses revealed approximately 2 mol of non-heme Fe per mol of the purified enzyme (M(r) = 40,000). The UV-visible absorption spectrum of the purified enzyme consists of a protein absorption at 278 nm (epsilon a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00168a003

    authors: Dailey HA,Finnegan MG,Johnson MK

    更新日期:1994-01-18 00:00:00

  • Mapping the microtubule binding regions of calponin.

    abstract::The smooth muscle basic calponin interacts with F-actin and inhibits the actomyosin ATPase in a calmodulin or phosphorylation modulated manner. It also binds in vitro to microtubules and its acidic isoform, present in nonmuscle cells, and co-localizes with microfilaments and microtubules in cultured neurons. To assess...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi020336g

    authors: Fattoum A,Roustan C,Smyczynski C,Der Terrossian E,Kassab R

    更新日期:2003-02-11 00:00:00

  • Conformation of immunoglobulin M. 2. Nanosecond fluorescence depolarization analysis of segmental flexibility in anti-epsilon-l-dimethylamino-5-naphthalenesulfonyl-L-lysine anti-immunoglobulin from horse, pig, and shark.

    abstract::The rotational motions of immunoglobulin M (IgM) were investigated by the nanosecond fluorescence depolarization technique. The fluorophore epsilon-1-dimethylamino-5-naphthalenesulfonyl-L-lysine (DNS-lysine) was specifically bound in the combining sites of anti-DNS IgM antibodies from the horse, pig, and nurse shark. ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00660a033

    authors: Holowka DA,Cathou RE

    更新日期:1976-07-27 00:00:00

  • Chemical modification of alpha-subunit tryptophan residues in Schizosaccharomyces pombe mitochondrial F1 adenosine 5'-triphosphatase: differential reactivity and role in activity.

    abstract::Chemical modification of mitochondrial F1-ATPase from Schizosaccharomyces pombe by the tryptophan-specific reagent N-bromosuccinimide (NBS) at pH 5.0 in the presence of 20% glycerol produced a characteristic lowering in both enzyme absorbance at 280 nm and intrinsic fluorescence at 332 nm that varied with NBS/F1 molar...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00055a004

    authors: Divita G,Jault JM,Gautheron DC,Di Pietro A

    更新日期:1993-02-02 00:00:00

  • Analysis of Novel Interactions between Components of the Selenocysteine Biosynthesis Pathway, SEPHS1, SEPHS2, SEPSECS, and SECp43.

    abstract::In mammalian cells, the incorporation of the 21st amino acid, selenocysteine, into proteins is guided by the Sec machinery. The function of this protein complex requires several protein-protein and protein-RNA interactions, leading to the incorporation of selenocysteine at UGA codons. It is guided by stem-loop structu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.6b01116

    authors: Oudouhou F,Casu B,Dopgwa Puemi AS,Sygusch J,Baron C

    更新日期:2017-05-02 00:00:00