Relationship between Amphipathic β Structures in the β1 Domain of Apolipoprotein B and the Properties of the Secreted Lipoprotein Particles in McA-RH7777 Cells.

Abstract:

:Our previous studies demonstrated that the first 1000 amino acid residues (the βα1 domain) of human apolipoprotein (apo) B-100, termed apoB:1000, are required for the initiation of lipoprotein assembly and the formation of a monodisperse stable phospholipid (PL)-rich particle. The objectives of this study were (a) to assess the effects on the properties of apoB truncates undergoing sequential inclusion of the amphipathic β strands in the 700 N-terminal residues of the β1 domain of apoB-100 and (b) to identify the subdomain in the β1 domain that is required for the formation of a microsomal triglyceride transfer protein (MTP)-dependent triacylglycerol (TAG)-rich apoB-containing particle. Characterization of particles secreted by stable transformants of McA-RH7777 cells demonstrated the following. (1) The presence of amphipathic β strands in the 200 N-terminal residues of the β1 domain resulted in the secretion of apoB truncates (apoB:1050 to apoB:1200) as both lipidated and lipid-poor particles. (2) Inclusion of residues 300-700 of the β1 domain led to the secretion of apoB:1300, apoB:1400, apoB:1500, and apoB:1700 predominantly as lipidated particles. (3) Particles containing residues 1050-1500 were all rich in PL. (4) There was a marked increase in the lipid loading capacity and TAG content of apoB:1700-containing particles. (5) Only the level of secretion of apoB:1700 was markedly diminished by MTP inhibitor BMS-197636. These results suggest that apoB:1700 marks the threshold for the formation of a TAG-rich particle and support the concept that MTP participates in apoB assembly and secretion at the stage where particles undergo a transition from PL-rich to TAG-rich.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Manchekar M,Kapil R,Sun Z,Segrest JP,Dashti N

doi

10.1021/acs.biochem.6b01174

subject

Has Abstract

pub_date

2017-08-08 00:00:00

pages

4084-4094

issue

31

eissn

0006-2960

issn

1520-4995

journal_volume

56

pub_type

杂志文章
  • A mutate-and-map strategy for inferring base pairs in structured nucleic acids: proof of concept on a DNA/RNA helix.

    abstract::We propose a rapid chemical strategy for identifying base pairs in structured nucleic acid systems. The approach goes beyond traditional chemical mapping approaches by monitoring perturbations of each residue's chemical accessibility in response to systematic mutagenesis of residues that are distant in sequence but ne...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi101123g

    authors: Kladwang W,Das R

    更新日期:2010-09-07 00:00:00

  • Binding and reactivity of Candida albicans estrogen binding protein with steroid and other substrates.

    abstract::In this report recombinant estrogen binding protein (EBP1), isolated originally from Candida albicans as a result of its high affinity for 17beta-estradiol, has been purified extensively using a modified affinity purification scheme originally developed for a homolog of EBP1, old yellow enzyme (OYE). It is shown that ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi981106y

    authors: Buckman J,Miller SM

    更新日期:1998-10-06 00:00:00

  • 1H nuclear magnetic resonance double resonance study of oxytocin in aqueous solution.

    abstract::Peptide NH resonances in the 250 MHZ 1H nuclear magnetic resonance (NMR) spectrum of oxytocin in H2O were assigned to specific amino acid residues by the "underwater decoupling" technique (i.e., decoupling from corresponding CalphaH resonances, which are buried beneath the intense water peak). These experiments confir...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00650a025

    authors: Glickson JD,Rowan R,Pitner TP,Dadok J,Bothner-By AA,Walter R

    更新日期:1976-03-09 00:00:00

  • Single-strand and double-strand deoxyribonucleic acid breaks produced by several bleomycin analogues.

    abstract::Production of single-strand breaks (ssb) and double-strand breaks (dsb) of PM2 phage DNA by several structurally related bleomycin (BLM) analogues was studied by gel electrophoresis. BLM A2 and BLM B2 produced a comparable extent of dsb. In various experiments, BLM A2 and BLM B2, at 22-41 ng/mL, degraded 50% of the fo...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00505a001

    authors: Huang CH,Mirabelli CK,Jan Y,Crooke ST

    更新日期:1981-01-20 00:00:00

  • Induced fit and kinetic mechanism of adenylation catalyzed by Escherichia coli threonyl-tRNA synthetase.

    abstract::Threonyl-tRNA synthetase (ThrRS) must discriminate among closely related amino acids to maintain the fidelity of protein synthesis. Here, a pre-steady state kinetic analysis of the ThRS-catalyzed adenylation reaction was carried out by monitoring changes in intrinsic tryptophan fluorescence. Stopped flow fluorimetry f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0355701

    authors: Bovee ML,Pierce MA,Francklyn CS

    更新日期:2003-12-30 00:00:00

  • Nuclear Overhauser effect as a tool for the complete assignment of nonexchangeable proton resonances in short deoxyribonucleic acid helices.

    abstract::A new strategy for the assignment of nonexchangeable proton resonances in oligonucleotide duplexes is presented and used to interpret the spectra of the oligonucleotide helix d(CpGpCpGpCpG) X d(CpGpCpGpCpG) in low salt (B form). This procedure is based on the use of sequential homodecoupling (1D) or COSY (2D) for the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00291a020

    authors: Frechet D,Cheng DM,Kan LS,Ts'o PO

    更新日期:1983-10-25 00:00:00

  • Steady-state and pre-steady-state kinetic analysis of Mycobacterium smegmatis cysteine ligase (MshC).

    abstract::Mycobacterium tuberculosis and many other members of the Actinomycetes family produce mycothiol, i.e., 1-d-myo-inosityl-2-(N-acetyl-l-cysteinyl)amido-2-deoxy-alpha-d-glucopyranoside (MSH or AcCys-GlcN-Ins), to act against oxidative and antibiotic stress. The biosynthesis of MSH is essential for cell growth and has bee...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi7011492

    authors: Fan F,Luxenburger A,Painter GF,Blanchard JS

    更新日期:2007-10-09 00:00:00

  • Localization of a trifluoperazine binding site on troponin C.

    abstract::Trifluoperazine (TFP) was shown to interact with the cyanogen bromide fragment 9 (CB9) (residues 84-135) of rabbit skeletal troponin C and with a synthetic peptide representing the N-terminal region of CB9. The phenothiazine did not affect the calcium binding property of CB9 as observed by proton magnetic resonance an...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00276a010

    authors: Gariépy J,Hodges RS

    更新日期:1983-03-29 00:00:00

  • Structure of the human pancreatic cholesterol esterase gene.

    abstract::The gene for human pancreatic cholesterol esterase consists of 11 exons and 10 introns and is 9.2 kb in length. The last and longest exon (841 nucleotides) is unique to the human gene. Functional amino acids are encoded on separate exons. The leader sequence is encoded by a single exon which carries two additional N-t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00141a017

    authors: Kumar BV,Aleman-Gomez JA,Colwell N,Lopez-Candales A,Bosner MS,Spilburg CA,Lowe M,Lange LG

    更新日期:1992-07-07 00:00:00

  • Biochemical characterization of the O-linked glycosylation pathway in Neisseria gonorrhoeae responsible for biosynthesis of protein glycans containing N,N'-diacetylbacillosamine.

    abstract::The O-linked protein glycosylation pathway in Neisseria gonorrhoeae is responsible for the synthesis of a complex oligosaccharide on undecaprenyl diphosphate and subsequent en bloc transfer of the glycan to serine residues of select periplasmic proteins. Protein glycosylation (pgl) genes have been annotated on the bas...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi2003372

    authors: Hartley MD,Morrison MJ,Aas FE,Børud B,Koomey M,Imperiali B

    更新日期:2011-06-07 00:00:00

  • Murine epidermal growth factor: structure and function.

    abstract::Murine epidermal growth factor (EGF), a 53 amino acid protein, has been modified by enzymic digestion, site-specific chemical reactions, and recombinant DNA technology. After trypsin digestion the EGF derivatives EGF1-48 (called EGF-T) and EGF1-45 (called EGF-T2) were separated from the residual EGF and the C-terminal...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00414a005

    authors: Burgess AW,Lloyd CJ,Smith S,Stanley E,Walker F,Fabri L,Simpson RJ,Nice EC

    更新日期:1988-07-12 00:00:00

  • Collagen biosynthesis by cultured Chinese hamster lung cells. Cell-free synthesis of procollagen alpha chains.

    abstract::Cell-free extracts from the HTl clone of cultured Chinese hamster lung cells efficiently promote the incorporation of proline into newly synthesized material, 50% of which is digestible to small peptides by highly purified bacterial collagenase. The synthesis of the these products occurs under optimal protein synthesi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00598a018

    authors: Haralson MA,Frey KL,Mitchell WM

    更新日期:1978-03-07 00:00:00

  • Kinetic mechanism of active site assembly and chemical catalysis of DNA polymerase β.

    abstract::It has been inferred from structural and computational studies that the mechanism of DNA polymerases involves subtle but important discrete steps that occur between binding and recognition of the correct dNTP and chemical catalysis. These steps potentially include local conformational changes involving active site res...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200954r

    authors: Balbo PB,Wang EC,Tsai MD

    更新日期:2011-11-15 00:00:00

  • Affinity labeling of the active site and the reactive sulfhydryl associated with activation of rat liver phenylalanine hydroxylase.

    abstract::A pterin analogue, 5-[(3-azido-6-nitrobenzylidene)amino]-2,6-diamino-4-pyrimidinone (ANBADP), was synthesized as a probe of the pterin binding site of phenylalanine hydroxylase. The photoaffinity label has been found to be a competitive inhibitor of the enzyme with respect to 6,7-dimethyltetrahydropterin, having a Ki ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00241a024

    authors: Gibbs BS,Benkovic SJ

    更新日期:1991-07-09 00:00:00

  • Polypeptide clearing in model membranes: an analysis of the partition of gramicidin a' between cadmium ion induced gel and liquid-crystalline phases in vesicles of phosphatidic acid and phosphatidylcholine.

    abstract::Using a simple model for a biological membrane we examine cation-induced gel phase formation and the depletion of polypeptide from the gel phase. The model system consists of vesicles of phosphatidic acid and phosphatidylcholine which contain gramicidin A'. By use of electron spin resonance to monitor lipid phase beha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00282a013

    authors: Feigenson GW

    更新日期:1983-06-21 00:00:00

  • Differences in rearrangements of H1 and H5 in chicken erythrocyte chromatin.

    abstract::H1 can rearrange in chicken erythrocyte polynucleosomes in 80 mM NaCl buffers. These rearrangements have been studied by sedimentation analysis. H1 redistributes between polynucleosomes as well as between polynucleosomes and monosomes. In these rearrangements H1 molecules move to free DNA sites. In contrast to H1, the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00508a010

    authors: Lasters I,Muyldermans S,Wyns L,Hamers R

    更新日期:1981-03-03 00:00:00

  • Distribution of disulfide bonds in the two-disulfide intermediates in the regeneration of bovine pancreatic ribonuclease A: further insights into the folding process.

    abstract::The distribution of one-disulfide bonds in the two-disulfide intermediates in the oxidative refolding of bovine pancreatic ribonuclease A has been characterized. These two-disulfide intermediates were formed from the fully reduced denatured protein by oxidation with dithiothreitol, then blocked with AEMTS, purified by...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990570f

    authors: Volles MJ,Xu X,Scheraga HA

    更新日期:1999-06-01 00:00:00

  • Glutamate 189 of the D1 polypeptide modulates the magnetic and redox properties of the manganese cluster and tyrosine Y(Z) in photosystem II.

    abstract::Recent models for water oxidation in photosystem II postulate that the tyrosine Y(Z) radical, Y(Z)(*), abstracts both an electron and a proton from the Mn cluster during one or more steps in the catalytic cycle. This coupling of proton- and electron-transfer events is postulated to provide the necessary driving force ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992749w

    authors: Debus RJ,Campbell KA,Pham DP,Hays AM,Britt RD

    更新日期:2000-05-30 00:00:00

  • An RNA polymerase mutant with reduced accuracy of chain elongation.

    abstract::A new Escherichia coli RNA polymerase mutant was isolated which exhibited reduced accuracy of chain elongation in vivo and in vitro. The novel isolation procedure consisted of simultaneous selection for rifampicin resistance and screening for increased leakiness of an early, strongly polar nonsense mutation of lacZ, o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00368a013

    authors: Blank A,Gallant JA,Burgess RR,Loeb LA

    更新日期:1986-10-07 00:00:00

  • Deuterium exchange of operator 8CH groups as a Raman probe of repressor recognition: interactions of wild-type and mutant lambda repressors with operator OL1.

    abstract::The rate of deuterium exchange of a purine 8CH group in DNA is highly sensitive to both macromolecular secondary structure and intermolecular interactions which restrict solvent access to the major groove [Lamba, O.P., Becka, R., & Thomas, G.J., Jr. (1990) Biopolymers 29, 1465-1477]. We have exploited the sensitivity ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00127a012

    authors: Reilly KE,Becka R,Thomas GJ Jr

    更新日期:1992-03-31 00:00:00

  • Circular substrates of the hammerhead ribozyme shift the internal equilibrium further toward cleavage.

    abstract::To test whether the Y-shaped conformation of the hammerhead ribozyme is maintained throughout the catalytic pathway, the cleavage properties of circular substrates which bind the ribozyme through helices I and II were determined. Constraining the position of helices I and II in this manner did not significantly alter ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980307z

    authors: Stage-Zimmermann TK,Uhlenbeck OC

    更新日期:1998-06-30 00:00:00

  • Conformations of primary amphipathic carrier peptides in membrane mimicking environments.

    abstract::Two peptides designed for drug delivery were generated by the combination of a signal peptide with a nuclear localization sequence and are shown to facilitate the cellular internalization of small molecules which are covalently linked to these peptides. In order to understand the mechanism of internalization, the conf...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9708491

    authors: Chaloin L,Vidal P,Heitz A,Van Mau N,Méry J,Divita G,Heitz F

    更新日期:1997-09-16 00:00:00

  • Analysis of the backbone dynamics of interleukin-1 beta using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy.

    abstract::The backbone dynamics of uniformly 15N-labeled interleukin-1 beta are investigated by using two-dimensional inverse detected heteronuclear 15N-1H NMR spectroscopy. 15N T1, T2, and NOE data at a spectrometer frequency of 600 MHz are obtained for 90% of the backbone amide groups. The data provide evidence for motions on...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00484a006

    authors: Clore GM,Driscoll PC,Wingfield PT,Gronenborn AM

    更新日期:1990-08-14 00:00:00

  • Arg314 is essential for catalysis by N-acetyl neuraminic acid synthase from Neisseria meningitidis.

    abstract::The sialic acid N-acetylneuraminic acid (NANA) has a key role in the pathogenesis of a select number of neuroinvasive bacteria such as Neisseria meningitidis. These pathogens coat themselves with polysialic acids, mimicking the exterior surface of mammalian cells and consequentially concealing the bacteria from the ho...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi400062c

    authors: Joseph DD,Jiao W,Parker EJ

    更新日期:2013-04-16 00:00:00

  • Structure of the ternary complex formed by a chemotaxis receptor signaling domain, the CheA histidine kinase, and the coupling protein CheW as determined by pulsed dipolar ESR spectroscopy.

    abstract::The signaling apparatus that controls bacterial chemotaxis is composed of a core complex containing chemoreceptors, the histidine autokinase CheA, and the coupling protein CheW. Site-specific spin labeling and pulsed dipolar ESR spectroscopy (PDS) have been applied to investigate the structure of a soluble ternary com...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi100055m

    authors: Bhatnagar J,Borbat PP,Pollard AM,Bilwes AM,Freed JH,Crane BR

    更新日期:2010-05-11 00:00:00

  • Sequential DNA Binding and Dimerization Processes of the Photosensory Protein EL222.

    abstract::EL222 is a blue light sensor protein, which consists of a light-oxygen-voltage domain as a light sensor and a LuxR-type helix-turn-helix DNA-binding domain. The reaction dynamics of the protein-DNA binding were observed for the first time using the time-resolved transient grating method. The reaction scheme was determ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b01206

    authors: Takakado A,Nakasone Y,Terazima M

    更新日期:2018-03-13 00:00:00

  • Structural basis for substrate binding and the catalytic mechanism of type III pantothenate kinase.

    abstract::Pantothenate kinase (PanK) catalyzes the first step of the universal five-step coenzyme A (CoA) biosynthetic pathway. The recently characterized type III PanK (PanK-III, encoded by the coaX gene) is distinct in sequence, structure and enzymatic properties from both the long-known bacterial type I PanK (PanK-I, exempli...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi7018578

    authors: Yang K,Strauss E,Huerta C,Zhang H

    更新日期:2008-02-05 00:00:00

  • An FTIR investigation of flanking sequence effects on the structure and flexibility of DNA binding sites.

    abstract::Fourier transform infrared (FTIR) spectroscopy and a library of FTIR marker bands have been used to examine the structure and relative flexibilities conferred by different flanking sequences on the EcoRI binding site. This approach allowed us to examine unique peaks and subtle changes in the spectra of d(AAAGAATTCTTT)...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8015235

    authors: Kahn TR,Fong KK,Jordan B,Lek JC,Levitan R,Mitchell PS,Wood C,Hatcher ME

    更新日期:2009-02-17 00:00:00

  • Argonaute Facilitates the Lateral Diffusion of the Guide along Its Target and Prevents the Guide from Being Pushed Away by the Ribosome.

    abstract::Argonaute (AGO) proteins play central roles in nucleic acid-guided interference that regulates gene expression and defend against foreign genetic elements in all life. Although much progress has been made with respect to the function of argonaute proteins in target recognition and cleavage, the detailed mechanism of t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00213

    authors: Song G,Chen H,Sheng G,Wang Y,Lou J

    更新日期:2018-04-17 00:00:00

  • Insertion of Argos sequences into the B-loop of epidermal growth factor results in a low-affinity ligand with strong agonistic activity.

    abstract::Recently, it has been shown that the activation of the Drosophila EGF receptor (DER) by its natural ligand Spitz is inhibited by Argos [Schweitzer, R., et al. (1995) Nature 376, 699-702]. Argos and Spitz both have an EGF-like domain which in the case of Argos differs from that of Spitz and other EGF receptor agonists ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi970227f

    authors: van de Poll ML,van Vugt MJ,Lenferink AE,van Zoelen EJ

    更新日期:1997-06-17 00:00:00