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Comparison of microarray-predicted closest genomes to sequencing for poliovirus vaccine strain similarity and influenza A phylogeny.

Abstract：

:We evaluate sequence data from the PathChip high-density hybridization array for epidemiological interpretation of detected pathogens. For influenza A, we derive similar relative outbreak clustering in phylogenetic trees from PathChip-derived compared to classical Sanger-derived sequences. For a positive polio detection, recent infection could be excluded based on vaccine strain similarity.

journal_name

Diagn Microbiol Infect Dis

journal_title

Diagnostic microbiology and infectious disease

authors

Maurer-Stroh S,Lee CW,Patel C,Lucero M,Nohynek H,Sung WK,Murad C,Ma J,Hibberd ML,Wong CW,Simões EA

doi

10.1016/j.diagmicrobio.2015.11.003

subject

Has Abstract

pub_date

2016-03-01 00:00:00

pages

203-6

issue

3

eissn

0732-8893

issn

1879-0070

pii

S0732-8893(15)00402-2

journal_volume

84

pub_type

杂志文章

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