Single particle labeling of RNA virus in live cells.

Abstract:

:Real-time and visual tracking of viral infection is crucial for elucidating the infectious and pathogenesis mechanisms. To track the virus successfully, an efficient labeling method is necessary. In this review, we first discuss the practical labeling techniques for virus tracking in live cells. We then describe the current knowledge of interactions between RNA viruses (especially influenza viruses, immunodeficiency viruses, and Flaviviruses) and host cellular structures, obtained using single particle labeling techniques combined with real-time fluorescence microscopy. Single particle labeling provides an easy system for understanding the RNA virus life cycle.

journal_name

Virus Res

journal_title

Virus research

authors

Liu X,Ouyang T,Ouyang H,Ren L

doi

10.1016/j.virusres.2017.05.007

subject

Has Abstract

pub_date

2017-06-02 00:00:00

pages

14-21

eissn

0168-1702

issn

1872-7492

pii

S0168-1702(17)30254-X

journal_volume

237

pub_type

杂志文章,评审
  • Strand-specific compositional asymmetries in double-stranded DNA viruses.

    abstract::Analysis of 22 complete sequences of double-stranded DNA viruses reveals striking compositional asymmetries between leading and lagging, and between transcribed and non-transcribed strands. In all bi-directionally replicated genomes analyzed, the observed leading strand GC skew (measuring relative excess of guanines v...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(98)00139-7

    authors: Grigoriev A

    更新日期:1999-03-01 00:00:00

  • Analysis and prediction of baculovirus promoter sequences.

    abstract::Consensus patterns of baculovirus sequences upstream from the translational initiation sites have been analyzed and a web tool, Local Alignment Promoter Predictor (LAPP), for the prediction of baculovirus promoter sequences has also been developed. Potential consensus sequences, i.e., TCATTGT, TCTTGTA, CTCGTAA, TCCATT...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2005.04.016

    authors: Xing K,Deng R,Wang J,Feng J,Huang M,Wang X

    更新日期:2005-10-01 00:00:00

  • NF-κB is required for dengue virus NS5-induced RANTES expression.

    abstract::Dengue virus (DENV) infection associates with renal disorders. Patients with dengue hemorrhagic fever and acute kidney injury have a high mortality rate. Increased levels of cytokines may contribute to the pathogenesis of DENV-induced kidney injury. Currently, molecular mechanisms how DENV induces kidney cell injury h...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2014.12.007

    authors: Khunchai S,Junking M,Suttitheptumrong A,Kooptiwut S,Haegeman G,Limjindaporn T,Yenchitsomanus PT

    更新日期:2015-02-02 00:00:00

  • The genome sequence and proteome of bacteriophage ΦCPV1 virulent for Clostridium perfringens.

    abstract::Application of bacteriophages and their lytic enzymes to control Clostridium perfringens is one potential approach to reduce the pathogen on poultry farms and in poultry-processing facilities. Bacteriophages lytic for C. perfringens were isolated from sewage, feces and broiler intestinal contents and ΦCPV1, a virulent...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2010.11.012

    authors: Volozhantsev NV,Verevkin VV,Bannov VA,Krasilnikova VM,Myakinina VP,Zhilenkov EL,Svetoch EA,Stern NJ,Oakley BB,Seal BS

    更新日期:2011-02-01 00:00:00

  • Interferon-alpha and ribavirin resistance of Huh7 cells transfected with HCV subgenomic replicon.

    abstract::To model HCV resistance to a treatment with interferon-alpha (IFN-alpha) and ribavirin, Huh7 cells, bearing HCV subgenomic replicons, were treated with these compounds for several weeks. Analysis of the cell clones, which were able to support replication of HCV RNA in the presence of high concentrations of these antiv...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2006.12.007

    authors: Aus dem Siepen M,Oniangue-Ndza C,Wiese M,Ross S,Roggendorf M,Viazov S

    更新日期:2007-04-01 00:00:00

  • In vitro and in vivo activity of AS101 against West Nile virus (WNV).

    abstract::There are currently no effective drugs to treat serious complications caused by WNV infection. The inhibition of WNV by the pluripotent immunomodulator AS101 [ammonium trichloro(dioxyethylene-0-0')tellurate] was evaluated in vitro and in vivo, and its mechanism was explored. Adding AS101 to Vero cells 1h or 5 min befo...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.03.004

    authors: Indenbaum V,Bin H,Makarovsky D,Weil M,Shulman LM,Albeck M,Sredni B,Mendelson E

    更新日期:2012-06-01 00:00:00

  • Effect of recombinant hybrid human interferon on replication and morphogenesis of HSV-1 in monkey cells.

    abstract::Human recombinant alpha interferon, A/D, significantly reduced the replication and cell fusion induced by herpes simplex virus type 1 in monkey cells. Thin-section electron microscopy of interferon-treated monkey cells showed distinct assembly of nucleocapsids within the nucleus. Analysis of virus-specific proteins by...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(89)90051-8

    authors: Chatterjee S,Whitley RJ

    更新日期:1989-01-01 00:00:00

  • The cytoplasmic tail of the neuraminidase protein of influenza A virus does not play an important role in the packaging of this protein into viral envelopes.

    abstract::We have rescued a transfectant influenza virus, NA/TAIL(-), whose neuraminidase (NA) protein lacks the predicted cytoplasmic tail. The virus was attenuated (one log10 reduction) both in tissue culture and in mouse lungs. Attenuation correlated with a 50% reduction of the level of NA in infected cells and levels of inc...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(95)00017-k

    authors: García-Sastre A,Palese P

    更新日期:1995-06-01 00:00:00

  • Conditioned medium from persistently RSV-infected macrophages alters transcriptional profile and inflammatory response of non-infected macrophages.

    abstract::Cells susceptible to persistent viral infections undergo important changes in their biological functions as a consequence of the expression of viral gene products that are capable of altering the gene expression profile of the host cell. Previously, we reported that persistence of the RSV genome in a mouse macrophage ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2017.01.001

    authors: Rivera-Toledo E,Salido-Guadarrama I,Rodríguez-Dorantes M,Torres-González L,Santiago-Olivares C,Gómez B

    更新日期:2017-02-15 00:00:00

  • Interplay between potato virus X and RNA granules in Nicotiana benthamiana.

    abstract::Cytoplasmic RNA granules consist of microscopic agglomerates of mRNAs and proteins and occur when the translation is reversibly and temporally halted (stress granules, SGs) or mRNAs are targeted for decapping (processing bodies, PBs). The induction of RNA granules formation by virus infection is a common feature of ma...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2019.197823

    authors: Robles-Luna G,Furman N,Barbarich MF,Carlotto N,Attorresi A,García ML,Kobayashi K

    更新日期:2020-01-15 00:00:00

  • RING finger proteins of infectious spleen and kidney necrosis virus (ISKNV) function as ubiquitin ligase enzymes.

    abstract::Infectious spleen and kidney necrosis virus (ISKNV) is the etiological agent that causes a pandemic and severe disease in fish characteristic of enlarged and damaged spleen and kidney. To identify viral proteins involved in infection and pathogenesis, we characterized five open reading frames (ORFs) of the ISKNV genom...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2006.09.003

    authors: Xie J,Zhu J,Yang H,Weng S,Chen C,Chen H,Xie Q,Li M,He J

    更新日期:2007-02-01 00:00:00

  • GP4-specific neutralizing antibodies might be a driving force in PRRSV evolution.

    abstract::The structural envelope glycoprotein GP4 of European porcine reproductive and respiratory syndrome virus (PRRSV) strains contains a highly variable neutralizing epitope that is susceptible to neutralizing antibody-mediated selective pressure in vitro. In this study, it was analyzed what happens with this neutralizing ...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2010.08.026

    authors: Costers S,Vanhee M,Van Breedam W,Van Doorsselaere J,Geldhof M,Nauwynck HJ

    更新日期:2010-12-01 00:00:00

  • Four distinct isolates of Helminthosporium victoriae virus 190S identified from Bipolaris maydis.

    abstract::Helminthosporium victoriae virus 190S (HvV190S) is the type species of the genus Victorivirus under the family Totiviridae. To date, HvV190S has never been found in places outside of the USA and has Helminthosporium victoriae as its only know natural host fungus in the field. Here, we report the identification of 4 do...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.197941

    authors: Wu R,Yang Y,Duan X,An H,Du Z,Zhang S,Zhang X

    更新日期:2020-08-01 00:00:00

  • Mutations in the coat protein-binding cis-acting RNA motifs debilitate RNA recombination of Brome mosaic virus.

    abstract::We have previously described the efficient homologous recombination system between 5' subgenomic RNA3a (sgRNA3a) and genomic RNA3 of Brome mosaic virus (BMV) in barley protoplasts (Sztuba-Solińska et al., 2011a). Here, we demonstrated that sequence alterations in the coat protein (CP)-binding cis-acting RNA motifs, th...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.10.001

    authors: Sztuba-Solińska J,Fanning SW,Horn JR,Bujarski JJ

    更新日期:2012-12-01 00:00:00

  • Host cell targets for African swine fever virus.

    abstract::Viruses are strict intracellular pathogens that require the cellular environment to complete a successful infection. Among them, African swine fever virus (ASFV) is an evolutionary ancient DNA virus, endemic in Africa, which is nowadays causing an emergent disease in Europe with a potential high economic impact in the...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2015.05.026

    authors: Muñoz-Moreno R,Galindo I,Cuesta-Geijo MÁ,Barrado-Gil L,Alonso C

    更新日期:2015-11-02 00:00:00

  • Reversion to wildtype of a mutated and nonfunctional coxsackievirus B3CRE(2C).

    abstract::The cis-acting replication element (CRE) in the 2C protein coding region [CRE(2C)] of enteroviruses (EV) facilitates the addition of two uridine residues (uridylylation) onto the virus-encoded protein VPg in order for it to serve as the RNA replication primer. We demonstrated that coxsackievirus B3 (CVB3) is replicati...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2016.04.016

    authors: Smithee S,Tracy S,Chapman NM

    更新日期:2016-07-15 00:00:00

  • RNA viruses and their silencing suppressors boost Abutilon mosaic virus, but not the Old World Tomato yellow leaf curl Sardinia virus.

    abstract::Mixed viral infections can induce different changes in symptom development, genome accumulation and tissue tropism. These issues were investigated for two phloem-limited begomoviruses, Abutilon mosaic virus (AbMV) and Tomato yellow leaf curl Sardinia virus (TYLCSV) in Nicotiana benthamiana plants doubly infected by ei...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2011.07.021

    authors: Sardo L,Wege C,Kober S,Kocher C,Accotto GP,Noris E

    更新日期:2011-11-01 00:00:00

  • A laboratory-adapted HCV JFH-1 strain is sensitive to neutralization and can gradually escape under the selection pressure of neutralizing human plasma.

    abstract::Viral replication and neutralization of hepatitis C viruses (HCV) have been studied using the infectious molecular clone JFH-1. By passaging JFH-1 in hepatoma cells in the absence or presence of HCV neutralizing antibodies (nAbs), we investigated the molecular mechanisms of cell-culture adaptation and sensitivity to n...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.07.022

    authors: Song H,Ren F,Li J,Shi S,Yan L,Gao F,Li K,Zhuang H

    更新日期:2012-10-01 00:00:00

  • Transmission of influenza A/H5N1 viruses in mammals.

    abstract::Highly pathogenic avian H5N1 influenza A viruses occasionally infect humans and cause severe respiratory disease and fatalities. Currently, these viruses are not efficiently transmitted from person to person, although limited human-to-human transmission may have occurred. Nevertheless, further adaptation of avian H5N1...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2013.07.017

    authors: Imai M,Herfst S,Sorrell EM,Schrauwen EJ,Linster M,De Graaf M,Fouchier RA,Kawaoka Y

    更新日期:2013-12-05 00:00:00

  • The genome sequence and transmission of an iflavirus from the brown planthopper, Nilaparvata lugens.

    abstract::A previously unknown iflavirus has been identified in a laboratory colony of the brown planthopper, Nilaparvata lugens. The iflavirus-like sequence was first identified in contig sequences obtained from transcriptome sequencing (RNA-seq) of the brown planthopper. The complete viral genome was resequenced using the San...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2013.06.005

    authors: Murakami R,Suetsugu Y,Kobayashi T,Nakashima N

    更新日期:2013-09-01 00:00:00

  • Molecular analysis of double-stranded RNAs reveals complex infection of grapevines with multiple viruses.

    abstract::The table grape variety "Waltham Cross" was infected with Leafroll and Shiraz Disease. To reveal specific viruses that are associated with the diseased plants, we used an RT-PCR-based strategy to determine partial genome sequences of these viruses. Upon cloning and sequencing of the RT-PCR products, we detected seven ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2006.10.014

    authors: Prosser SW,Goszczynski DE,Meng B

    更新日期:2007-03-01 00:00:00

  • A modified viral satellite DNA-based gene silencing vector is effective in association with heterologous begomoviruses.

    abstract::We have previously reported effective gene silencing of a transgene and endogenous plant genes in tobacco and tomato plants using a modified viral satellite DNA associated with Tomato yellow leaf curl China virus (TYLCCNV). In this study, we constructed a similar gene silencing vector (DNADeltaC12beta) based on the sa...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2005.12.003

    authors: Qian Y,Mugiira RB,Zhou X

    更新日期:2006-06-01 00:00:00

  • The actin cytoskeleton is important for rotavirus internalization and RNA genome replication.

    abstract::Numerous host factors are required for the efficient replication of rotavirus, including the activation and inactivation of several cell signaling pathways. One of the cellular structures that are reorganized during rotavirus infection is the actin cytoskeleton. In this work, we report that the dynamics of the actin m...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2019.01.003

    authors: Trejo-Cerro O,Aguilar-Hernández N,Silva-Ayala D,López S,Arias CF

    更新日期:2019-04-02 00:00:00

  • Comparison of replication competence of wild-type and lamivudine-resistant hepatitis B virus isolates from a chronic hepatitis B patient.

    abstract::In lamivudine-refractory chronic hepatitis B (CHB) patients, discontinuation of lamivudine therapy may lead to loss of lamivudine-resistant hepatitis B virus (HBV) and reappearance of wide-type HBV as dominant strains, yet the underlying mechanism remains unclear. In this study, we cloned wide-type and lamivudine-resi...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2018.07.021

    authors: Zhang Q,Chen J,Pan M,Liu J,Liu T,Zhou YH

    更新日期:2018-08-15 00:00:00

  • Bovine herpesvirus-1: Genetic diversity of field strains from cattle with respiratory disease, genital, fetal disease and systemic neonatal disease and their relationship to vaccine strains.

    abstract::Bovine herpesvirus-1 (BoHV-1) causes disease in cattle with varied clinical forms. In the U.S. there are two BoHV1 subtypes, BoHV-1.1 and BoHV-1.2b. Control programs in North America incorporate modified live (MLV) or killed (KV) viral vaccines. However, BoHV-1 strains continue to be isolated from diseased animals or ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2016.06.017

    authors: Fulton RW,d'Offay JM,Dubovi EJ,Eberle R

    更新日期:2016-09-02 00:00:00

  • Allopurinol, an inhibitor of purine catabolism, enhances susceptibility of tobacco to Tobacco mosaic virus.

    abstract::Tobacco (cv. Xanthi nn) plants were watered with allopurinol [4-hydroxypyrazolo (3,4-d) pyrimidine, HPP], a xanthine oxidoreductase (XOR) inhibitor, to investigate its effects on infection by Tobacco mosaic virus engineered to express the green fluorescent protein (TMV.GFP). TMV.GFP infection was monitored by examinat...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2008.05.018

    authors: Silvestri S,Murphy AM,Buonaurio R,Carr JP

    更新日期:2008-11-01 00:00:00

  • Population structure of Blackberry yellow vein associated virus, an emerging crinivirus.

    abstract::Blackberry yellow vein disease (BYVD), a disorder caused by virus complexes, has become a major threat to fresh market blackberry production in the United States. Blackberry yellow vein associated virus (BYVaV) is the most prevalent virus in the BYVD complexes; detected in about 50% of samples exhibiting typical disea...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.07.009

    authors: Poudel B,Sabanadzovic S,Bujarski J,Tzanetakis IE

    更新日期:2012-10-01 00:00:00

  • Interferon stimulated gene 15 promotes Zika virus replication through regulating Jak/STAT and ISGylation pathways.

    abstract::Zika virus is an emergent arbovirus that has caused a public health emergency in South America. Zika virus infection is known to cause microcephaly and other congenital defects and Guillain-Barré syndrome. Unfortunately no direct antiviral treatments are available at present. IFN-stimulated gene 15 (ISG15) is one of t...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.198087

    authors: Wang Y,Ren K,Li S,Yang C,Chen L

    更新日期:2020-10-02 00:00:00

  • Cellular and early viral factors in the interaction of adenovirus type 12 with hamster cells: the abortive response.

    abstract::The interaction of human adenovirus type 12 (Ad12) with Syrian hamster cells is remarkable in that there is a block of viral DNA replication and late gene transcription. We have screened several cellular factors known to play a role in adenovirus replication for their possible contributions to the interactions of Ad12...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(01)00242-8

    authors: Hösel M,Schröer J,Webb D,Jaroshevskaja E,Doerfler W

    更新日期:2001-12-04 00:00:00

  • The stress granule component G3BP is a novel interaction partner for the nuclear shuttle proteins of the nanovirus pea necrotic yellow dwarf virus and geminivirus abutilon mosaic virus.

    abstract::Stress granules (SGs) are structures within cells that regulate gene expression during stress response, e.g. viral infection. In mammalian cells assembly of SGs is dependent on the Ras-GAP SH3-domain-binding protein (G3BP). The C-terminal domain of the viral nonstructural protein 3 (nsP3) of Semliki Forest virus (SFV)...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2016.09.021

    authors: Krapp S,Greiner E,Amin B,Sonnewald U,Krenz B

    更新日期:2017-01-02 00:00:00