Genetic characterization of an adapted pandemic 2009 H1N1 influenza virus that reveals improved replication rates in human lung epithelial cells.

Abstract:

:The 2009 influenza pandemic originated from a swine-origin H1N1 virus, which, although less pathogenic than anticipated, may acquire additional virulence-associated mutations in the future. To estimate the potential risk, we sequentially passaged the isolate A/Hamburg/04/2009 in A549 human lung epithelial cells. After passage 6, we observed a 100-fold increased replication rate. High-throughput sequencing of viral gene segments identified five dominant mutations, whose contribution to the enhanced growth was analyzed by reverse genetics. The increased replication rate was pinpointed to two mutations within the hemagglutinin (HA) gene segment (HA1 D130E, HA2 I91L), near the receptor binding site and the stem domain. The adapted virus also replicated more efficiently in mice in vivo. Enhanced replication rate correlated with increased fusion pH of the HA protein and a decrease in receptor affinity. Our data might be relevant for surveillance of pre-pandemic strains and development of high titer cell culture strains for vaccine production.

journal_name

Virology

journal_title

Virology

authors

Wörmann X,Lesch M,Welke RW,Okonechnikov K,Abdurishid M,Sieben C,Geissner A,Brinkmann V,Kastner M,Karner A,Zhu R,Hinterdorfer P,Anish C,Seeberger PH,Herrmann A,Meyer TF,Karlas A

doi

10.1016/j.virol.2016.02.002

subject

Has Abstract

pub_date

2016-05-01 00:00:00

pages

118-29

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(16)00045-3

journal_volume

492

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • The complete genome structure and synthesis of infectious RNA from clones of tomato bushy stunt virus.

    abstract::The complete sequence of the genome of the cherry strain of tomato bushy stunt virus (TBSV), a member of the tombusvirus group, was determined. A full-length clone of the genome containing a bacteriophage T7 RNA polymerase promoter was assembled from partial cDNA clones. In vitro transcripts of the genome, either with...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90468-7

    authors: Hearne PQ,Knorr DA,Hillman BI,Morris TJ

    更新日期:1990-07-01 00:00:00

  • Analysis of human papillomavirus 16 variants and risk for cervical cancer in Chinese population.

    abstract::HPV16 is the most carcinogenic HPV type, but only a minority of HPV16 infections progress to cancer. Intratype genetic variants of HPV16 have been suggested to confer differential carcinogenicity. To investigate risk implications of HPV16 variants among Chinese women, a case-control study was conducted with 298 cervic...

    journal_title:Virology

    pub_type: 杂志文章,meta分析

    doi:10.1016/j.virol.2015.11.016

    authors: Hang D,Yin Y,Han J,Jiang J,Ma H,Xie S,Feng X,Zhang K,Hu Z,Shen H,Clifford GM,Dai M,Li N

    更新日期:2016-01-15 00:00:00

  • Unique physicochemical properties of human enteric Ad41 responsible for its survival and replication in the gastrointestinal tract.

    abstract::Human enteric adenovirus Ad41 is associated with children gastroenteritis. To infect gastrointestinal cells, the invading virus must be acid-stable and resistant to inactivation by bile salts and proteases. In addition, it has to cross the mucus barrier before it infects mucosa cells. We show that Ad41 infectivity is ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2004.01.020

    authors: Favier AL,Burmeister WP,Chroboczek J

    更新日期:2004-04-25 00:00:00

  • Sequence variability and function of measles virus 3' and 5' ends and intercistronic regions.

    abstract::Sequences critical for the activity of the measles virus (MV) RNA polymerase in transcription and replication were analyzed using a MV genomic cDNA library containing overlapping clones encompassing the entire MV genome. Clones corresponding to the 3' and 5' ends of the MV genome were identified and sequenced, and the...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90564-8

    authors: Crowley JC,Dowling PC,Menonna J,Silverman JI,Schuback D,Cook SD,Blumberg BM

    更新日期:1988-06-01 00:00:00

  • Structural analysis provides insights into the modular organization of picornavirus IRES.

    abstract::Picornavirus RNA translation is driven by the internal ribosome entry site (IRES) element. The impact of RNA structure on the foot-and-mouth disease virus (FMDV) IRES activity has been analyzed using Selective 2'Hydroxyl Acylation analyzed by Primer Extension (SHAPE) and high throughput analysis of RNA conformation by...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.10.013

    authors: Fernández N,García-Sacristán A,Ramajo J,Briones C,Martínez-Salas E

    更新日期:2011-01-20 00:00:00

  • Autographa californica nuclear polyhedrosis virus: subcellular localization and protein trafficking of BV/ODV-E26 to intranuclear membranes and viral envelopes.

    abstract::The Autographa californica nuclear polyhedrosis virus da26 gene codes for an envelope protein of both budded virus (BV) and occlusion derived virus (ODV). Western blot and temporal analysis of infected cell extracts detected a protein of 26 kDa by 4 h postinfection (p.i.). The amount of protein increased by 16 h p.i. ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1997.8903

    authors: Beniya H,Braunagel SC,Summers MD

    更新日期:1998-01-05 00:00:00

  • Temperature-induced structural stabilization of the encapsidated RNA of southern bean mosaic virus and its biologic significance.

    abstract::Virions of southern bean mosaic virus (SBMV) show two distinct sensitivity patterns upon heating. Infectivity loss and capsid denaturation occur concurrently if virions are exposed at 50-55 degrees in 0.1 M sodium phosphate buffer, pH 7.5, or 0.1 M glycine-phosphate buffer, pH 9.0. Contrastingly, virions are inactivat...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(81)90437-2

    authors: Veerisetty V,El-Hassan SA,Sehgal OP

    更新日期:1981-01-30 00:00:00

  • Immunogenicity of peptides simulating a neutralization epitope of transmissible gastroenteritis virus.

    abstract::Previously, an epitope recognized by a set of neutralizing monoclonal antibodies directed against the S protein of transmissible gastroenteritis has been identified. This neutralization epitope can be simulated by a single peptide combining residues 380 to 387 and 1176 to 1184 of the S protein; this combination peptid...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90684-4

    authors: Posthumus WP,Lenstra JA,van Nieuwstadt AP,Schaaper WM,van der Zeijst BA,Meloen RH

    更新日期:1991-05-01 00:00:00

  • Association of reovirus proteins with the structural matrix of infected cells.

    abstract::The interaction of reovirus with the cytoskeleton was investigated. The soluble components of infected cells were extracted with the nonionic detergent NP-40 in a physiological buffer, and a cytoskeletal extract was prepared from the detergent-insoluble fraction. We observed a selective association of viral-specified ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(87)90464-8

    authors: Mora M,Partin K,Bhatia M,Partin J,Carter C

    更新日期:1987-08-01 00:00:00

  • TLR3-dependent upregulation of RIG-I leads to enhanced cytokine production from cells infected with the parainfluenza virus SV5.

    abstract::Here we address the role of RIG-I and TLR3 in differential cytokine responses against Simian Virus 5 (SV5) and two distinct cytokine inducing SV5 mutants. IFN-beta and IL-6 secretion was induced by infection with P/V-CPI-, an SV5 mutant with P/V substitutions, and were reduced by either siRNA-mediated knockdown of RIG...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.11.014

    authors: Manuse MJ,Parks GD

    更新日期:2010-02-05 00:00:00

  • Nucleotide sequence analysis of the S genomic segment of Prospect Hill virus: comparison with the prototype Hantavirus.

    abstract::The genomic S RNA segment of Prospect Hill virus (PHV), a member of the Hantavirus genus, was molecularly cloned and the nucleotide sequence of the cDNA determined. The PHV S RNA segment is 1675 nucleotides long. A long open reading frame was identified in the viral complementary-sense RNA that could encode a 433 amin...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90197-y

    authors: Parrington MA,Kang CY

    更新日期:1990-03-01 00:00:00

  • Human Cytomegalovirus nuclear egress and secondary envelopment are negatively affected in the absence of cellular p53.

    abstract::Human Cytomegalovirus (HCMV) infection is compromised in cells lacking p53, a transcription factor that mediates cellular stress responses. In this study we have investigated compromised functional virion production in cells with p53 knocked out (p53KOs). Infectious center assays found most p53KOs released functional ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2016.07.021

    authors: Kuan MI,O'Dowd JM,Chughtai K,Hayman I,Brown CJ,Fortunato EA

    更新日期:2016-10-01 00:00:00

  • A high throughput Cre-lox activated viral membrane fusion assay identifies pharmacological inhibitors of HIV entry.

    abstract::Enveloped virus entry occurs when viral and cellular membranes fuse releasing particle contents into the target cell. Human immunodeficiency virus (HIV) entry occurs by cell-free virus or virus transferred between infected and uninfected cells through structures called virological synapses. We developed a high-through...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2015.10.013

    authors: Esposito AM,Cheung P,Swartz TH,Li H,Tsibane T,Durham ND,Basler CF,Felsenfeld DP,Chen BK

    更新日期:2016-03-01 00:00:00

  • HIV-1 transgenic rats develop T cell abnormalities.

    abstract::HIV-1 infection leads to impaired antigen-specific T cell proliferation, increased susceptibility of T cells to apoptosis, progressive impairment of T-helper 1 (Th1) responses, and altered maturation of HIV-1-specific memory cells. We have identified similar impairments in HIV-1 transgenic (Tg) rats. Tg rats developed...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2003.12.010

    authors: Reid W,Abdelwahab S,Sadowska M,Huso D,Neal A,Ahearn A,Bryant J,Gallo RC,Lewis GK,Reitz M

    更新日期:2004-03-30 00:00:00

  • An insertion mutation in the pol gene of Moloney murine leukemia virus results in temperature-sensitive pol maturation and viral replication.

    abstract::An insertion mutation in the pol gene of Moloney murine leukemia virus (M-MuLV) was found to render the virus temperature-sensitive for replication. A provirus containing a 12-bp insertion at the boundary between the reverse transcriptase (RT) and integrase (IN) domains induced the formation of mutant virions containi...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90428-5

    authors: Tanese N,Roth M,Epstein H,Goff SP

    更新日期:1989-06-01 00:00:00

  • Early antibody responses map to non-protective, PCV2 capsid protein epitopes.

    abstract::Porcine circovirus type 2 (PCV2) is an economically important cause of post-weaning multisystemic wasting syndrome (PMWS) in weanling piglets. Current commercial vaccines against PCV2 are highly effective. Yet, a recurring emergence of new genotypes in vaccinated herds necessitates a better understanding of protective...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2019.11.008

    authors: Ilha M,Nara P,Ramamoorthy S

    更新日期:2020-01-15 00:00:00

  • Construction and characterization of E1-minus replication-defective adenovirus vectors that express E3 proteins from the E1 region.

    abstract::Previous research has indicated that the adenovirus protein complex named RID, derived from the E3 transcription unit, functions to remove the receptors named Fas/Apo1/CD95 (Fas) and epidermal growth factor receptor (EGFR) from the surface of cells. (The RID complex is composed of the RIDalpha and RIDbeta polypeptides...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1580

    authors: Toth K,Kuppuswamy M,Doronin K,Doronina O,Lichtenstein D,Tollefson A,Wold W

    更新日期:2002-09-15 00:00:00

  • Demonstration of the specificity of poliovirus encapsidation using a novel replicon which encodes enzymatically active firefly luciferase.

    abstract::The specificity of poliovirus encapsidation has been studied using a novel chimeric genome in which the gene encoding firefly luciferase has been substituted for the VP2-VP3-VP1 genes of the poliovirus capsid (P1) gene. Transfection of RNA transcribed in vitro from this genome resulted in a VP4-luciferase fusion prote...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9046

    authors: Porter DC,Ansardi DC,Wang J,McPherson S,Moldoveanu Z,Morrow CD

    更新日期:1998-03-30 00:00:00

  • Genetic characterization, molecular epidemiology, and phylogenetic relationships of insect-specific viruses in the taxon Negevirus.

    abstract::The recently described taxon Negevirus is comprised of a diverse group of insect-specific viruses isolated from mosquitoes and phlebotomine sandflies. In this study, a comprehensive genetic characterization, molecular, epidemiological and evolutionary analyses were conducted on nearly full-length sequences of 91 new n...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2017.01.022

    authors: Nunes MRT,Contreras-Gutierrez MA,Guzman H,Martins LC,Barbirato MF,Savit C,Balta V,Uribe S,Vivero R,Suaza JD,Oliveira H,Nunes Neto JP,Carvalho VL,da Silva SP,Cardoso JF,de Oliveira RS,da Silva Lemos P,Wood TG,Widen SG

    更新日期:2017-04-01 00:00:00

  • Crystallization and preliminary X-ray analysis of the dsDNA bacteriophage HK97 mature empty capsid.

    abstract::HK97 is a temperate dsDNA bacteriophage of Escherichia coli that is structurally similar to phage lambda, with an icosahedral head of triangulation (7) number 7. Although the capsids of several large dsDNA phages have been studied extensively using a variety of biophysical approaches, no high-resolution structure is a...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9040

    authors: Wikoff WR,Duda RL,Hendrix RW,Johnson JE

    更新日期:1998-03-30 00:00:00

  • Each of the eight simian hemorrhagic fever virus minor structural proteins is functionally important.

    abstract::The simian hemorrhagic fever virus (SHFV) genome differs from those of other members of the family Arterivirus in encoding two adjacent sets of four minor structural protein open reading frames (ORFs). A stable, full-length, infectious SHFV-LVR cDNA clone was constructed. Virus produced from this clone had replication...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.06.001

    authors: Vatter HA,Di H,Donaldson EF,Baric RS,Brinton MA

    更新日期:2014-08-01 00:00:00

  • HPV16 E1--E4 protein is phosphorylated by Cdk2/cyclin A and relocalizes this complex to the cytoplasm.

    abstract::The human papillomavirus type 16 E1--E4 protein is expressed abundantly in cells supporting viral DNA amplification, but its expression is lost during malignant progression. In cell culture, 16E1--E4 causes G2 cell cycle arrest by associating with and preventing the nuclear entry of Cdk1/cyclin B1 complexes. Here, we ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.02.024

    authors: Davy CE,Ayub M,Jackson DJ,Das P,McIntosh P,Doorbar J

    更新日期:2006-05-25 00:00:00

  • Determination of a splice acceptor site of pX gene in HTLV-I infected cells.

    abstract::The splice acceptor site of pX gene of HTLV-I has been determined to be at base position 7301 using S1 nuclease protection analysis. This splice acceptor site is used in all HTLV-I immortalized T-cell clones studied despite variation in the abundance levels of pX mRNA. Our results confirmed the proposal by Haseltine e...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90404-0

    authors: Okamoto T,Josephs SF,Kawanishi M,Wong-Staal F

    更新日期:1985-06-01 00:00:00

  • Identification and genomic mapping of the ORF3 and VPg proteins in feline calicivirus virions.

    abstract::Two minor proteins with molecular masses of 8.5 and 15.5 kDa were identified in feline calicivirus (FCV) virions. Direct sequence analysis showed that the N-terminal sequence of the 8.5-kDa protein was identical to that of the predicted protein encoded by open reading frame 3 (ORF3) of the FCV genome. The N-terminal s...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2000.0579

    authors: Sosnovtsev SV,Green KY

    更新日期:2000-11-10 00:00:00

  • Cell surface binding simian virus 40 large T antigen becomes anchored and stably linked to lipid of the target cells.

    abstract::Previously a new small subclass of SV40 large T antigen with a high-binding affinity to living target cells was characterized (J. Lange-Mutschler and R. Henning, 1983, Virology 127, 333-344.) In the present study the external binding process, particularly the tight linkage of T antigen to lipid of the target cells, wa...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(84)90176-4

    authors: Lange-Mutschler J,Henning R

    更新日期:1984-07-30 00:00:00

  • The incorporation of reovirus cell attachment protein sigma 1 into virions requires the N-terminal hydrophobic tail and the adjacent heptad repeat region.

    abstract::The N-terminal portion of the reovirus cell attachment protein sigma 1 has recently been shown to possess intrinsic oligomerization and virion-anchoring functions. Sequence analysis of the sigma 1 proteins of the three reovirus serotypes has revealed the presence of distinct structural domains within this region: a te...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90678-5

    authors: Leone G,Mah DC,Lee PW

    更新日期:1991-05-01 00:00:00

  • Insights into the control of geminiviral promoters.

    abstract::Geminiviruses constitute one of the largest groups of plant viruses, having characteristic twinned geminate particles encapsidating small circular single-stranded DNA molecules. Geminiviral promoters are generally located within the intergenic region, although promoters have also been detected within the genes. Simila...

    journal_title:Virology

    pub_type: 杂志文章,评审

    doi:10.1016/j.virol.2016.04.033

    authors: Borah BK,Zarreen F,Baruah G,Dasgupta I

    更新日期:2016-08-01 00:00:00

  • Sequence-specific methylation inhibits the activity of the Epstein-Barr virus LMP 1 and BCR2 enhancer-promoter regions.

    abstract::We reported earlier that variable expression of the Epstein-Barr virus (EBV) encoded membrane protein LMP 1 in nasopharyngeal carcinoma and the host-cell-phenotype-dependent activity of the BCR2 promoter (one of the possible initiator sites for transcripts of Epstein-Barr nuclear antigens) in Burkitt's lymphoma (BL) l...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1229

    authors: Minarovits J,Hu LF,Minarovits-Kormuta S,Klein G,Ernberg I

    更新日期:1994-05-01 00:00:00

  • Reactivities of human sera with human herpesvirus-8-infected BCBL-1 cells and identification of HHV-8-specific proteins and glycoproteins and the encoding cDNAs.

    abstract::The reactivates of human sera with uninduced and phorbol ester (TPA)-induced human herpesvirus-8 (HHV-8)-infected BCBL-1 cells were examined by immunofluorescence assay (IFA) and by radioimmunoprecipitation reactions (RIP). The seroprevalence of HHV-8 infections is low in the United States general population and only ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9055

    authors: Chandran B,Smith MS,Koelle DM,Corey L,Horvat R,Goldstein E

    更新日期:1998-03-30 00:00:00

  • Induction of apoptosis by the Vpr protein of human immunodeficiency virus type 1 occurs independently of G(2) arrest of the cell cycle.

    abstract::The HIV-1 accessory gene product Vpr can inhibit cell proliferation via cell cycle arrest at the G(2) phase, and it can induce apoptosis after G(2) arrest. We found recently that C81, a carboxy-terminally truncated form of Vpr, induced apoptosis via G(1) arrest but did not induce G(2) arrest of the cell cycle. Thus, i...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2000.0534

    authors: Nishizawa M,Kamata M,Mojin T,Nakai Y,Aida Y

    更新日期:2000-10-10 00:00:00